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Mouse SNP Summary
Symbol
Name
ID 		Tssr71354
transcription start site region 71354
MGI:5999121

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263621617
MGI SNP Detail		 Chr7:26864231 Cpgi18625 within coordinates of
Egln2 within coordinates of
Rr167303 within coordinates of
Tssr71354 1906 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A G G A G A A A G A A A A A A G A A A A A A G G A A A
rs579160063
MGI SNP Detail		 Chr7:26864379 Egln2 within coordinates of
Rr167303 within coordinates of
Tssr71354 1758 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs221101105
MGI SNP Detail		 Chr7:26864484 Egln2 within coordinates of
Rr167303 within coordinates of
Tssr71354 1653 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs582622404
MGI SNP Detail		 Chr7:26864600 Egln2 within coordinates of
Rr167303 within coordinates of
Tssr71354 1537 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs239856658
MGI SNP Detail		 Chr7:26864678 Egln2 within coordinates of
Rr167303 within coordinates of
Tssr71354 1459 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257720362
MGI SNP Detail		 Chr7:26865384 Egln2 within coordinates of
Rr167303 within coordinates of
Tssr71354 753 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs585553403
MGI SNP Detail		 Chr7:26865405 Egln2 within coordinates of
Rr167303 within coordinates of
Tssr71354 732 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs579481352
MGI SNP Detail		 Chr7:26865480 Cpgi18626 within coordinates of
Egln2 within coordinates of
Rr167303 within coordinates of
Tssr71354 657 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224861698
MGI SNP Detail		 Chr7:26865506 Cpgi18626 within coordinates of
Egln2 within coordinates of
Rr167303 within coordinates of
Tssr71354 631 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249078938
MGI SNP Detail		 Chr7:26865531 Cpgi18626 within coordinates of
Egln2 within coordinates of
Rr167303 within coordinates of
Tssr71354 606 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs266128835
MGI SNP Detail		 Chr7:26865571 Cpgi18626 within coordinates of
Egln2 within coordinates of
Rr167303 within coordinates of
Tssr71354 566 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A G G G G G G A G G G G G G G G G G G
rs233122878
MGI SNP Detail		 Chr7:26865572 Cpgi18626 within coordinates of
Egln2 within coordinates of
Rr167303 within coordinates of
Tssr71354 565 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C G C C C C C C G C C C C C C C C C C C
rs258247407
MGI SNP Detail		 Chr7:26865598 Cpgi18626 within coordinates of
Egln2 within coordinates of
Rr167303 within coordinates of
Tssr71354 539 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A G A A A A
rs214844285
MGI SNP Detail		 Chr7:26865603 Cpgi18626 within coordinates of
Egln2 within coordinates of
Rr167303 within coordinates of
Tssr71354 534 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A G G G G G G A G G G G G G G G G G G
rs225818986
MGI SNP Detail		 Chr7:26865690 Cpgi18626 within coordinates of
Egln2 within coordinates of
Rr167303 within coordinates of
Tssr71354 447 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243570082
MGI SNP Detail		 Chr7:26865723 Cpgi18626 within coordinates of
Egln2 within coordinates of
Rr167303 within coordinates of
Tssr71354 414 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C G C C C C C C G C C C C C C C C C C C
rs31722390
MGI SNP Detail		 Chr7:26865804 Cpgi18626 within coordinates of
Egln2 within coordinates of
Rr167303 within coordinates of
Tssr71354 333 bp downstream
 SNP C/T T C
rs582363412
MGI SNP Detail		 Chr7:26865861 Cpgi18626 within coordinates of
Egln2 within coordinates of
Rr167303 within coordinates of
Tssr71352 within coordinates of
Tssr71354 276 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237465687
MGI SNP Detail		 Chr7:26865867 Cpgi18626 within coordinates of
Egln2 within coordinates of
Rr167303 within coordinates of
Tssr71352 within coordinates of
Tssr71354 270 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255794776
MGI SNP Detail		 Chr7:26865949 Cpgi18626 within coordinates of
Egln2 within coordinates of
Rr167303 within coordinates of
Tssr71354 188 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs219548175
MGI SNP Detail		 Chr7:26865964 Cpgi18626 within coordinates of
Egln2 within coordinates of
Rr167303 within coordinates of
Tssr71354 173 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G A G G G G G G A G G G G G G G G G G G
rs239843581
MGI SNP Detail		 Chr7:26866029 Cpgi18626 within coordinates of
Egln2 within coordinates of
Rr167303 within coordinates of
Tssr71354 108 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A G A A A G A A A A A A G A A A A A A G A A A
rs253964394
MGI SNP Detail		 Chr7:26866062 Cpgi18626 within coordinates of
Egln2 within coordinates of
Rr167303 within coordinates of
Tssr71354 75 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221049877
MGI SNP Detail		 Chr7:26866323 Cpgi18626 within coordinates of
Rr167303 within coordinates of
Tssr71354 174 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239790919
MGI SNP Detail		 Chr7:26866333 Cpgi18626 within coordinates of
Rr167303 within coordinates of
Tssr71354 184 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251367794
MGI SNP Detail		 Chr7:26866459 Cpgi18626 within coordinates of
Rr167303 within coordinates of
Tssr71354 310 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs221876020
MGI SNP Detail		 Chr7:26866527 Cpgi18626 within coordinates of
Rr167303 within coordinates of
Rr400185 within coordinates of
Tssr71354 378 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243826340
MGI SNP Detail		 Chr7:26866637 Rr167303 within coordinates of
Rr400185 within coordinates of
Tssr71354 488 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C T C C C C C C T C C C C C C C C C C C C
rs264350579
MGI SNP Detail		 Chr7:26866690 Rr167303 within coordinates of
Rr400185 within coordinates of
Tssr71354 541 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233941863
MGI SNP Detail		 Chr7:26866695 Rr167303 within coordinates of
Rr400185 within coordinates of
Tssr71354 546 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246335365
MGI SNP Detail		 Chr7:26866701 Rr167303 within coordinates of
Rr400185 within coordinates of
Tssr71354 552 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs257199646
MGI SNP Detail		 Chr7:26866833 Rr167303 within coordinates of
Tssr71354 684 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs225804416
MGI SNP Detail		 Chr7:26866880 Rr167303 within coordinates of
Tssr71354 731 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A G
rs243554463
MGI SNP Detail		 Chr7:26866895 Rr167303 within coordinates of
Tssr71354 746 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212648546
MGI SNP Detail		 Chr7:26866954 Rr167303 within coordinates of
Tssr71354 805 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227438243
MGI SNP Detail		 Chr7:26866975 Rr167303 within coordinates of
Tssr71354 826 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs259921185
MGI SNP Detail		 Chr7:26867002 Rr167303 within coordinates of
Tssr71354 853 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs219559294
MGI SNP Detail		 Chr7:26867006 Rr167303 within coordinates of
Tssr71354 857 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242425590
MGI SNP Detail		 Chr7:26867015 Rr167303 within coordinates of
Tssr71354 866 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs581215941
MGI SNP Detail		 Chr7:26867062 Rr167303 within coordinates of
Tssr71354 913 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs253902953
MGI SNP Detail		 Chr7:26867109 Rr167303 within coordinates of
Tssr71354 960 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215563531
MGI SNP Detail		 Chr7:26867133 Rr167303 within coordinates of
Tssr71354 984 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232925498
MGI SNP Detail		 Chr7:26867138 Rr167303 within coordinates of
Tssr71354 989 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs251311902
MGI SNP Detail		 Chr7:26867146 Rr167303 within coordinates of
Tssr71354 997 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs583609592
MGI SNP Detail		 Chr7:26867225 Rr167303 within coordinates of
Tssr71354 1076 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs221218103
MGI SNP Detail		 Chr7:26867281 Rr167303 within coordinates of
Tssr71354 1132 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241374765
MGI SNP Detail		 Chr7:26867301 Rr167303 within coordinates of
Tssr71354 1152 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs264321071
MGI SNP Detail		 Chr7:26867365 Rr167303 within coordinates of
Tssr71354 1216 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225586391
MGI SNP Detail		 Chr7:26867443 Tssr71354 1294 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs239948587
MGI SNP Detail		 Chr7:26867478 Tssr71354 1329 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T C C C C C C T C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs586815900
MGI SNP Detail		 Chr7:26867538 Tssr71354 1389 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C A C C C C C C A C C C C C C A C C C C
rs257182884
MGI SNP Detail		 Chr7:26867569 Tssr71354 1420 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C T T T T T T C T T T T T T C T T T T
rs226090591
MGI SNP Detail		 Chr7:26867645 Tssr71354 1496 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C
rs237156446
MGI SNP Detail		 Chr7:26867661 Tssr71354 1512 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G C G G G G
rs583718067
MGI SNP Detail		 Chr7:26867683 Tssr71354 1534 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G A G G G G
rs261768262
MGI SNP Detail		 Chr7:26867690 Tssr71354 1541 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs227751246
MGI SNP Detail		 Chr7:26867781 Tssr71354 1632 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs586727318
MGI SNP Detail		 Chr7:26867804 Tssr71354 1655 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs580695919
MGI SNP Detail		 Chr7:26867816 Tssr71354 1667 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs254447533
MGI SNP Detail		 Chr7:26867845 Tssr71354 1696 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265865022
MGI SNP Detail		 Chr7:26867994 Gm21983 within coordinates of
Rab4b within coordinates of
Tssr71354 1845 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs233365258
MGI SNP Detail		 Chr7:26867999 Gm21983 within coordinates of
Rab4b within coordinates of
Tssr71354 1850 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T C T T T T
rs247550368
MGI SNP Detail		 Chr7:26868011 Gm21983 within coordinates of
Rab4b within coordinates of
Tssr71354 1862 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215521071
MGI SNP Detail		 Chr7:26868029 Gm21983 within coordinates of
Rab4b within coordinates of
Tssr71354 1880 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs586949645
MGI SNP Detail		 Chr7:26868052 Gm21983 within coordinates of
Rab4b within coordinates of
Tssr71354 1903 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
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Showing SNP(s) 1 - 65 of 65
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory