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Mouse SNP Summary
Symbol
Name
ID 		Tssr72804
transcription start site region 72804
MGI:6000571

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Showing SNP(s) 1 - 52 of 52

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217166885
MGI SNP Detail
Alliance Variant		 Chr7:65018712 Tjp1 Intron
Tssr72804 1910 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs50272296
MGI SNP Detail
Alliance Variant		 Chr7:65018747 Tjp1 Intron
Tssr72804 1875 bp downstream
 SNP A/G G A
rs253437556
MGI SNP Detail
Alliance Variant		 Chr7:65018828 Tjp1 Intron
Tssr72804 1794 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs214616297
MGI SNP Detail
Alliance Variant		 Chr7:65018899 Rr647944 within coordinates of
Tjp1 Intron
Tssr72804 1723 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs237463877
MGI SNP Detail
Alliance Variant		 Chr7:65018942 Rr647944 within coordinates of
Tjp1 Intron
Tssr72804 1680 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A A A A A A A A A A A A A A A G A A G A
rs249678181
MGI SNP Detail
Alliance Variant		 Chr7:65018943 Rr647944 within coordinates of
Tjp1 Intron
Tssr72804 1679 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218976657
MGI SNP Detail
Alliance Variant		 Chr7:65018952 Rr647944 within coordinates of
Tjp1 Intron
Tssr72804 1670 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235605282
MGI SNP Detail
Alliance Variant		 Chr7:65019015 Rr647944 within coordinates of
Tjp1 Intron
Tssr72804 1607 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255399669
MGI SNP Detail
Alliance Variant		 Chr7:65019088 Rr647944 within coordinates of
Tjp1 Intron
Tssr72804 1534 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs224386413
MGI SNP Detail
Alliance Variant		 Chr7:65019242 Tjp1 Intron
Tssr72804 1380 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247624345
MGI SNP Detail
Alliance Variant		 Chr7:65019271 Tjp1 Intron
Tssr72804 1351 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs46926241
MGI SNP Detail
Alliance Variant		 Chr7:65019296 Tjp1 Intron
Tssr72804 1326 bp downstream
 SNP C C
rs32202386
MGI SNP Detail
Alliance Variant		 Chr7:65019348 Tjp1 Intron
Tssr72804 1274 bp downstream
 SNP C/T C C C T
rs222061577
MGI SNP Detail
Alliance Variant		 Chr7:65019432 Tjp1 Intron
Tssr72804 1190 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31902479
MGI SNP Detail
Alliance Variant		 Chr7:65019495 Tjp1 Intron
Tssr72804 1127 bp downstream
 SNP A/T T T A A T A
rs253605541
MGI SNP Detail
Alliance Variant		 Chr7:65019530 Tjp1 Intron
Tssr72804 1092 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs223926573
MGI SNP Detail
Alliance Variant		 Chr7:65019601 Tjp1 Intron
Tssr72804 1021 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs240521131
MGI SNP Detail
Alliance Variant		 Chr7:65019708 Tjp1 Intron
Tssr72804 914 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs266067623
MGI SNP Detail
Alliance Variant		 Chr7:65019852 Tjp1 Intron
Tssr72804 770 bp downstream
 SNP A/G G A A A A A A A A A A A A A A A A A A A A G G G A G G G A A A G A A A A G A G A A A A A A A A A A A A
rs231465087
MGI SNP Detail
Alliance Variant		 Chr7:65019995 Tjp1 Intron
Tssr72804 627 bp downstream
 SNP C/G G C C C C C C C C C C C C C C C C C C C C C C G G C G G G C C C C G C C C C G C C C C C C C C C C C C C C
rs258589379
MGI SNP Detail
Alliance Variant		 Chr7:65020073 Rr647945 within coordinates of
Tjp1 Intron
Tssr72804 549 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214197703
MGI SNP Detail
Alliance Variant		 Chr7:65020197 Cpgi19209 within coordinates of
Rr647945 within coordinates of
Tjp1 Intron
Tssr72804 425 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226947791
MGI SNP Detail
Alliance Variant		 Chr7:65020239 Cpgi19209 within coordinates of
Rr647945 within coordinates of
Tjp1 Intron
Tssr72804 383 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243835784
MGI SNP Detail
Alliance Variant		 Chr7:65020267 Cpgi19209 within coordinates of
Rr647945 within coordinates of
Tjp1 Intron
Tssr72804 355 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs213254846
MGI SNP Detail
Alliance Variant		 Chr7:65020429 Cpgi19209 within coordinates of
Rr647945 within coordinates of
Tjp1 Intron
Tssr72804 193 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235570426
MGI SNP Detail
Alliance Variant		 Chr7:65020448 Cpgi19209 within coordinates of
Rr647945 within coordinates of
Tjp1 Intron
Tssr72804 174 bp downstream
 SNP A/C A A A A A A A A C A C C A C A A A A A A C A A A A C A A A
rs255367701
MGI SNP Detail
Alliance Variant		 Chr7:65020621 Cpgi19209 within coordinates of
Rr647945 within coordinates of
Tjp1 Intron
Tjp1 mRNA-UTR
Tssr72804 1 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs216354106
MGI SNP Detail
Alliance Variant		 Chr7:65020876 Cpgi19209 within coordinates of
Rr647946 within coordinates of
Tjp1 Intron
Tjp1 mRNA-UTR
Tssr72804 244 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A C A C C C A A A C A A A A C A A A A A A A A A A A A A
rs238872322
MGI SNP Detail
Alliance Variant		 Chr7:65020878 Cpgi19209 within coordinates of
Rr647946 within coordinates of
Tjp1 Intron
Tjp1 mRNA-UTR
Tssr72804 246 bp upstream
 SNP A/G/T A A A A A A A A A A A A A A A A G A G G T A T T T A A A T A A A A T A G A A A A A A A G A A G
rs32252684
MGI SNP Detail
Alliance Variant		 Chr7:65021245 Cpgi19209 within coordinates of
Gm57226 within coordinates of
Rr647947 within coordinates of
Tjp1 Intron
Tjp1 mRNA-UTR
Tssr72804 613 bp upstream
 SNP C/G C G C G G
rs222499316
MGI SNP Detail
Alliance Variant		 Chr7:65021268 Cpgi19209 within coordinates of
Gm57226 within coordinates of
Rr647947 within coordinates of
Tjp1 Intron
Tjp1 mRNA-UTR
Tssr72804 636 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A
rs238259682
MGI SNP Detail
Alliance Variant		 Chr7:65021276 Cpgi19209 within coordinates of
Gm57226 within coordinates of
Rr647947 within coordinates of
Tjp1 Intron
Tjp1 mRNA-UTR
Tssr72804 644 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs248113136
MGI SNP Detail
Alliance Variant		 Chr7:65021279 Cpgi19209 within coordinates of
Gm57226 within coordinates of
Rr647947 within coordinates of
Tjp1 Intron
Tjp1 mRNA-UTR
Tssr72804 647 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs218650300
MGI SNP Detail
Alliance Variant		 Chr7:65021390 Gm57226 within coordinates of
Rr647947 within coordinates of
Tjp1 Intron
Tjp1 mRNA-UTR
Tssr72804 758 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs240480831
MGI SNP Detail
Alliance Variant		 Chr7:65021428 Gm57226 within coordinates of
Rr647947 within coordinates of
Tjp1 Intron
Tjp1 mRNA-UTR
Tssr72804 796 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs264279120
MGI SNP Detail
Alliance Variant		 Chr7:65021609 Gm57226 within coordinates of
Rr647947 within coordinates of
Tjp1 Intron
Tssr72804 977 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs32500004
MGI SNP Detail
Alliance Variant		 Chr7:65021650 Gm57226 within coordinates of
Rr647947 within coordinates of
Tjp1 Intron
Tssr72804 1018 bp upstream
 SNP C/T C T C C T
rs246162136
MGI SNP Detail
Alliance Variant		 Chr7:65021671 Gm57226 within coordinates of
Rr647947 within coordinates of
Tjp1 Intron
Tssr72804 1039 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs580214134
MGI SNP Detail
Alliance Variant		 Chr7:65021698 Gm57226 within coordinates of
Tjp1 Intron
Tssr72804 1066 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs265013530
MGI SNP Detail
Alliance Variant		 Chr7:65021806 Gm57226 within coordinates of
Tjp1 Intron
Tssr72804 1174 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs245891876
MGI SNP Detail
Alliance Variant		 Chr7:65021852 Gm57226 within coordinates of
Tjp1 Intron
Tssr72804 1220 bp upstream
 SNP C/T C T
rs226784124
MGI SNP Detail
Alliance Variant		 Chr7:65021890 Gm57226 within coordinates of
Tjp1 Intron
Tssr72804 1258 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs243803027
MGI SNP Detail
Alliance Variant		 Chr7:65021910 Gm57226 within coordinates of
Tjp1 Intron
Tssr72804 1278 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs6240255
MGI SNP Detail
Alliance Variant		 Chr7:65022013 Gm57226 within coordinates of
Tjp1 Intron
Tssr72804 1381 bp upstream
 SNP C/T C T T C C
rs31094054
MGI SNP Detail
Alliance Variant		 Chr7:65022096 Gm57226 within coordinates of
Tjp1 Intron
Tssr72804 1464 bp upstream
 SNP A/G A G G A
rs260271561
MGI SNP Detail
Alliance Variant		 Chr7:65022130 Gm57226 within coordinates of
Tjp1 Intron
Tssr72804 1498 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215868117
MGI SNP Detail
Alliance Variant		 Chr7:65022132 Gm57226 within coordinates of
Tjp1 Intron
Tssr72804 1500 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs241305145
MGI SNP Detail
Alliance Variant		 Chr7:65022229 Gm57226 within coordinates of
Tjp1 Intron
Tssr72804 1597 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250834647
MGI SNP Detail
Alliance Variant		 Chr7:65022331 Gm57226 within coordinates of
Tjp1 Intron
Tssr72804 1699 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215373814
MGI SNP Detail
Alliance Variant		 Chr7:65022584 Gm57226 within coordinates of
Tjp1 Intron
Tssr72804 1952 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs583623693
MGI SNP Detail
Alliance Variant		 Chr7:65022620 Gm57226 within coordinates of
Tjp1 Intron
Tssr72804 1988 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs585499098
MGI SNP Detail
Alliance Variant		 Chr7:65022629 Gm57226 within coordinates of
Tjp1 Intron
Tssr72804 1997 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
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Showing SNP(s) 1 - 52 of 52
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
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