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Mouse SNP Summary
Symbol
Name
ID 		Tssr73525
transcription start site region 73525
MGI:6001292

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31408820
MGI SNP Detail		 Chr7:89777204 2310010J17Rik within coordinates of
Tssr73525 1998 bp downstream
 SNP C/T C T T
rs31712533
MGI SNP Detail		 Chr7:89777213 2310010J17Rik within coordinates of
Tssr73525 1989 bp downstream
 SNP C/T C T C C T
rs224788773
MGI SNP Detail		 Chr7:89777302 2310010J17Rik within coordinates of
Tssr73525 1900 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244717730
MGI SNP Detail		 Chr7:89777400 2310010J17Rik within coordinates of
Tssr73525 1802 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs255906152
MGI SNP Detail		 Chr7:89777484 2310010J17Rik within coordinates of
Tssr73525 1718 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs219718517
MGI SNP Detail		 Chr7:89777490 2310010J17Rik within coordinates of
Tssr73525 1712 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C
rs237075787
MGI SNP Detail		 Chr7:89777628 2310010J17Rik within coordinates of
Tssr73525 1574 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs254190565
MGI SNP Detail		 Chr7:89777689 2310010J17Rik within coordinates of
Tssr73525 1513 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs229440961
MGI SNP Detail		 Chr7:89777707 2310010J17Rik within coordinates of
Tssr73525 1495 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A C A A A A A A A A A A A A A A C A A A A
rs250383634
MGI SNP Detail		 Chr7:89777711 2310010J17Rik within coordinates of
Tssr73525 1491 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G
rs263702149
MGI SNP Detail		 Chr7:89777753 2310010J17Rik within coordinates of
Tssr73525 1449 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs222832818
MGI SNP Detail		 Chr7:89777830 2310010J17Rik within coordinates of
Tssr73525 1372 bp downstream
 SNP A/C A C
rs232242061
MGI SNP Detail		 Chr7:89777895 2310010J17Rik within coordinates of
Tssr73525 1307 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs251617437
MGI SNP Detail		 Chr7:89777900 2310010J17Rik within coordinates of
Tssr73525 1302 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs213700432
MGI SNP Detail		 Chr7:89777927 2310010J17Rik within coordinates of
Tssr73525 1275 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C C C G C C C C C C C C C C C C
rs225786406
MGI SNP Detail		 Chr7:89777945 2310010J17Rik within coordinates of
Tssr73525 1257 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs244245025
MGI SNP Detail		 Chr7:89777959 2310010J17Rik within coordinates of
Tssr73525 1243 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C A C C C C C C C C C C C C
rs211950939
MGI SNP Detail		 Chr7:89778015 2310010J17Rik within coordinates of
Rr168173 within coordinates of
Tssr73525 1187 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs240137731
MGI SNP Detail		 Chr7:89778016 2310010J17Rik within coordinates of
Rr168173 within coordinates of
Tssr73525 1186 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263662870
MGI SNP Detail		 Chr7:89778048 2310010J17Rik within coordinates of
Rr168173 within coordinates of
Tssr73525 1154 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs216454632
MGI SNP Detail		 Chr7:89778066 2310010J17Rik within coordinates of
Rr168173 within coordinates of
Tssr73525 1136 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs245281603
MGI SNP Detail		 Chr7:89778083 2310010J17Rik within coordinates of
Rr168173 within coordinates of
Tssr73525 1119 bp downstream
 SNP C/T C T
rs239663020
MGI SNP Detail		 Chr7:89778099 2310010J17Rik within coordinates of
Rr168173 within coordinates of
Tssr73525 1103 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs250221338
MGI SNP Detail		 Chr7:89778117 2310010J17Rik within coordinates of
Rr168173 within coordinates of
Tssr73525 1085 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs219090070
MGI SNP Detail		 Chr7:89778136 2310010J17Rik within coordinates of
Rr168173 within coordinates of
Tssr73525 1066 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237089139
MGI SNP Detail		 Chr7:89778166 2310010J17Rik within coordinates of
Rr168173 within coordinates of
Tssr73525 1036 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs248482216
MGI SNP Detail		 Chr7:89778168 2310010J17Rik within coordinates of
Rr168173 within coordinates of
Tssr73525 1034 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227529234
MGI SNP Detail		 Chr7:89778206 2310010J17Rik within coordinates of
Rr168173 within coordinates of
Tssr73525 996 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs247752153
MGI SNP Detail		 Chr7:89778298 2310010J17Rik within coordinates of
Rr168173 within coordinates of
Tssr73525 904 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs265781018
MGI SNP Detail		 Chr7:89778337 2310010J17Rik within coordinates of
Rr168173 within coordinates of
Tssr73525 865 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs231834979
MGI SNP Detail		 Chr7:89778355 2310010J17Rik within coordinates of
Rr168173 within coordinates of
Tssr73525 847 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs239887944
MGI SNP Detail		 Chr7:89778392 2310010J17Rik within coordinates of
Rr168173 within coordinates of
Tssr73525 810 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs257654125
MGI SNP Detail		 Chr7:89778415 2310010J17Rik within coordinates of
Rr168173 within coordinates of
Tssr73525 787 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225007279
MGI SNP Detail		 Chr7:89778522 2310010J17Rik within coordinates of
Rr168173 within coordinates of
Rr400433 within coordinates of
Tssr73525 680 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs244257302
MGI SNP Detail		 Chr7:89778626 2310010J17Rik within coordinates of
Rr168173 within coordinates of
Rr400433 within coordinates of
Tssr73525 576 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs46394384
MGI SNP Detail		 Chr7:89778689 2310010J17Rik within coordinates of
Rr168173 within coordinates of
Rr400433 within coordinates of
Tssr73525 513 bp downstream
 SNP A/T A T A T
rs32247040
MGI SNP Detail		 Chr7:89778690 2310010J17Rik within coordinates of
Rr168173 within coordinates of
Rr400433 within coordinates of
Tssr73525 512 bp downstream
 SNP A/C A C A C
rs253832030
MGI SNP Detail		 Chr7:89778691 2310010J17Rik within coordinates of
Rr168173 within coordinates of
Rr400433 within coordinates of
Tssr73525 511 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217009146
MGI SNP Detail		 Chr7:89778794 2310010J17Rik within coordinates of
Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 408 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs237692253
MGI SNP Detail		 Chr7:89778805 2310010J17Rik within coordinates of
Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 397 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs250231080
MGI SNP Detail		 Chr7:89778844 2310010J17Rik within coordinates of
Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 358 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs213354643
MGI SNP Detail		 Chr7:89778866 2310010J17Rik within coordinates of
Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 336 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs583445572
MGI SNP Detail		 Chr7:89778879 2310010J17Rik within coordinates of
Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 323 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C A C C C C
rs230400361
MGI SNP Detail		 Chr7:89778898 2310010J17Rik within coordinates of
Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 304 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs248545875
MGI SNP Detail		 Chr7:89779008 2310010J17Rik within coordinates of
Cpgi19396 within coordinates of
Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 194 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C
rs227194019
MGI SNP Detail		 Chr7:89779559 Cpgi19396 within coordinates of
Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 306 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs250593956
MGI SNP Detail		 Chr7:89779610 Cpgi19396 within coordinates of
Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 357 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586965810
MGI SNP Detail		 Chr7:89779670 Cpgi19396 within coordinates of
Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 417 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs259782072
MGI SNP Detail		 Chr7:89780070 Cpgi19396 within coordinates of
Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 817 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs224527218
MGI SNP Detail		 Chr7:89780095 Cpgi19396 within coordinates of
Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 842 bp upstream
 SNP A/G G G A G A G G G G G G G A A A A A A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239900664
MGI SNP Detail		 Chr7:89780114 Cpgi19396 within coordinates of
Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 861 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257667432
MGI SNP Detail		 Chr7:89780163 Cpgi19396 within coordinates of
Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 910 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A
rs218950872
MGI SNP Detail		 Chr7:89780174 Cpgi19396 within coordinates of
Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 921 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237301568
MGI SNP Detail		 Chr7:89780243 Cpgi19396 within coordinates of
Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 990 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C T C C C C
rs266153745
MGI SNP Detail		 Chr7:89780289 Cpgi19396 within coordinates of
Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 1036 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C C C G C C C C C C G C C C C
rs31657057
MGI SNP Detail		 Chr7:89780298 Cpgi19396 within coordinates of
Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 1045 bp upstream
 SNP A/T A T A T T T
rs259207240
MGI SNP Detail		 Chr7:89780299 Cpgi19396 within coordinates of
Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 1046 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs263511358
MGI SNP Detail		 Chr7:89780352 Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 1099 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579598356
MGI SNP Detail		 Chr7:89780364 Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 1111 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs231924502
MGI SNP Detail		 Chr7:89780401 Picalm within coordinates of
Rr168173 within coordinates of
Tssr67700 within coordinates of
Tssr73525 1148 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs244389120
MGI SNP Detail		 Chr7:89780447 Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 1194 bp upstream
Tssr73531 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs583007389
MGI SNP Detail		 Chr7:89780453 Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 1200 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213415334
MGI SNP Detail		 Chr7:89780506 Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 1253 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T
rs230497266
MGI SNP Detail		 Chr7:89780750 Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 1497 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs51312968
MGI SNP Detail		 Chr7:89780873 Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 1620 bp upstream
 SNP C/T C C T T T C C C C C C T C T C C T C
rs218681113
MGI SNP Detail		 Chr7:89780924 Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 1671 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239916160
MGI SNP Detail		 Chr7:89781072 Picalm within coordinates of
Rr168173 within coordinates of
Tssr73525 1819 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 67 of 67
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory