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Mouse SNP Summary
Symbol
Name
ID 		Tssr74680
transcription start site region 74680
MGI:6002447

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Showing SNP(s) 1 - 73 of 73

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs582348899
MGI SNP Detail		 Chr7:126045222 Atp2a1 within coordinates of
Tssr69022 within coordinates of
Tssr74663 within coordinates of
Tssr74680 1944 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252858622
MGI SNP Detail		 Chr7:126045260 Atp2a1 within coordinates of
Tssr74680 1906 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs215757374
MGI SNP Detail		 Chr7:126045348 Atp2a1 within coordinates of
Tssr74680 1818 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs230883771
MGI SNP Detail		 Chr7:126045420 Atp2a1 within coordinates of
Tssr74680 1746 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs33085041
MGI SNP Detail		 Chr7:126045542 Atp2a1 within coordinates of
Tssr74680 1624 bp downstream
 SNP A/G G G G G A G G G G G G G G
rs212767457
MGI SNP Detail		 Chr7:126045705 Atp2a1 within coordinates of
Tssr74680 1461 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs229788388
MGI SNP Detail		 Chr7:126045973 Atp2a1 within coordinates of
Tssr74680 1193 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255127443
MGI SNP Detail		 Chr7:126046286 Atp2a1 within coordinates of
Tssr74680 880 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G
rs219507092
MGI SNP Detail		 Chr7:126046314 Atp2a1 within coordinates of
Tssr74680 852 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242304991
MGI SNP Detail		 Chr7:126046333 Atp2a1 within coordinates of
Tssr74680 833 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33085904
MGI SNP Detail		 Chr7:126046369 Atp2a1 within coordinates of
Tssr74668 within coordinates of
Tssr74680 797 bp downstream
 SNP C/G C C C C C C C C C C C C G C
rs224243219
MGI SNP Detail		 Chr7:126046507 Atp2a1 within coordinates of
Tssr74680 659 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33085906
MGI SNP Detail		 Chr7:126046692 Atp2a1 within coordinates of
Tssr74680 474 bp downstream
 SNP C/T T T T T T C T T T C T T C T
rs33085908
MGI SNP Detail		 Chr7:126046732 Atp2a1 within coordinates of
Tssr74680 434 bp downstream
 SNP A/G A A A A A G A G A A A A G A A A A
rs218925067
MGI SNP Detail		 Chr7:126046760 Atp2a1 within coordinates of
Tssr74680 406 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A A A A A A A A A T A A A A
rs236181493
MGI SNP Detail		 Chr7:126046768 Atp2a1 within coordinates of
Tssr74680 398 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs33085910
MGI SNP Detail		 Chr7:126046918 Atp2a1 within coordinates of
Tssr74680 248 bp downstream
 SNP A/G A A A A A G A A A A A A A A
rs225575518
MGI SNP Detail		 Chr7:126046928 Atp2a1 within coordinates of
Tssr74680 238 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33085912
MGI SNP Detail		 Chr7:126046983 Atp2a1 within coordinates of
Tssr74680 183 bp downstream
 SNP A/G G A G G A G G G A A G A A G G
rs263016730
MGI SNP Detail		 Chr7:126047100 Atp2a1 within coordinates of
Tssr74677 within coordinates of
Tssr74680 66 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G
rs230751092
MGI SNP Detail		 Chr7:126047117 Atp2a1 within coordinates of
Tssr74677 within coordinates of
Tssr74680 49 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs33087004
MGI SNP Detail		 Chr7:126047157 Atp2a1 within coordinates of
Tssr74679 within coordinates of
Tssr74680 9 bp downstream
 SNP A/G A A A A A A A A A A A A G A
rs33087006
MGI SNP Detail		 Chr7:126047239 Atp2a1 within coordinates of
Tssr74680 63 bp upstream
 SNP C/G G G G G G C G G G C G G C G
rs33087008
MGI SNP Detail		 Chr7:126047257 Atp2a1 within coordinates of
Tssr74680 81 bp upstream
 SNP A/G G G G G G A G G G A G G A G
rs33087011
MGI SNP Detail		 Chr7:126047360 Atp2a1 within coordinates of
Tssr74680 184 bp upstream
 SNP A/G G G G G G A G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33087994
MGI SNP Detail		 Chr7:126047402 Atp2a1 within coordinates of
Tssr74680 226 bp upstream
 SNP G/T G G G G G T G G G T G G T G
rs217950803
MGI SNP Detail		 Chr7:126047426 Atp2a1 within coordinates of
Tssr74680 250 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33080535
MGI SNP Detail		 Chr7:126047453 Atp2a1 within coordinates of
Tssr74680 277 bp upstream
 SNP C/T T T T T T T T T T C T T C T
rs33080537
MGI SNP Detail		 Chr7:126047459 Atp2a1 within coordinates of
Tssr74680 283 bp upstream
 SNP C/T T T T C T C T T T T T C
rs258414613
MGI SNP Detail		 Chr7:126047468 Atp2a1 within coordinates of
Tssr74680 292 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215847662
MGI SNP Detail		 Chr7:126047562 Atp2a1 within coordinates of
Tssr74680 386 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32246386
MGI SNP Detail		 Chr7:126047580 Atp2a1 within coordinates of
Tssr74680 404 bp upstream
 SNP A/G G A A G A A A G G A A A A A G G
rs233753984
MGI SNP Detail		 Chr7:126047641 Atp2a1 within coordinates of
Tssr74680 465 bp upstream
 SNP A/C C A
rs251264546
MGI SNP Detail		 Chr7:126047660 Atp2a1 within coordinates of
Tssr74680 484 bp upstream
 SNP A/G A G
rs230331168
MGI SNP Detail		 Chr7:126047664 Atp2a1 within coordinates of
Tssr74680 488 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs33080541
MGI SNP Detail		 Chr7:126047686 Atp2a1 within coordinates of
Tssr74680 510 bp upstream
 SNP A/G G G G G G G G G G A G G A G
rs261108013
MGI SNP Detail		 Chr7:126047781 Atp2a1 within coordinates of
Tssr74680 605 bp upstream
Tssr74686 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226465942
MGI SNP Detail		 Chr7:126047817 Atp2a1 within coordinates of
Tssr74680 641 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs246125527
MGI SNP Detail		 Chr7:126047970 Atp2a1 within coordinates of
Tssr74680 794 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265435468
MGI SNP Detail		 Chr7:126048033 Atp2a1 within coordinates of
Tssr74680 857 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580306810
MGI SNP Detail		 Chr7:126048065 Atp2a1 within coordinates of
Tssr74680 889 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs223115155
MGI SNP Detail		 Chr7:126048088 Atp2a1 within coordinates of
Tssr74680 912 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33081664
MGI SNP Detail		 Chr7:126048197 Atp2a1 within coordinates of
Tssr74680 1021 bp upstream
 SNP A/G A A A A A A A A A G A A G A
rs33081667
MGI SNP Detail		 Chr7:126048208 Atp2a1 within coordinates of
Tssr74680 1032 bp upstream
 SNP C/T C C C C C C C C C C T C C T
rs224226370
MGI SNP Detail		 Chr7:126048310 Atp2a1 within coordinates of
Tssr74680 1134 bp upstream
 SNP A/G A A A G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A G A G G A A A A A A A A A A A A A G A
rs248735667
MGI SNP Detail		 Chr7:126048338 Atp2a1 within coordinates of
Tssr74680 1162 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263958720
MGI SNP Detail		 Chr7:126048362 Atp2a1 within coordinates of
Tssr74680 1186 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs232900581
MGI SNP Detail		 Chr7:126048372 Atp2a1 within coordinates of
Tssr74680 1196 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs253345297
MGI SNP Detail		 Chr7:126048399 Atp2a1 within coordinates of
Tssr74680 1223 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216431124
MGI SNP Detail		 Chr7:126048514 Atp2a1 within coordinates of
Tssr74680 1338 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232286687
MGI SNP Detail		 Chr7:126048520 Atp2a1 within coordinates of
Tssr74680 1344 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243941717
MGI SNP Detail		 Chr7:126048628 Atp2a1 within coordinates of
Tssr74680 1452 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212924919
MGI SNP Detail		 Chr7:126048631 Atp2a1 within coordinates of
Tssr74680 1455 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230340657
MGI SNP Detail		 Chr7:126048638 Atp2a1 within coordinates of
Tssr74680 1462 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264413491
MGI SNP Detail		 Chr7:126048714 Atp2a1 within coordinates of
Tssr74680 1538 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs218451945
MGI SNP Detail		 Chr7:126048720 Atp2a1 within coordinates of
Tssr74680 1544 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33081669
MGI SNP Detail		 Chr7:126048737 Atp2a1 within coordinates of
Tssr74680 1561 bp upstream
 SNP A/C A A A A A A A A A C A A A
rs258894328
MGI SNP Detail		 Chr7:126048738 Atp2a1 within coordinates of
Tssr74680 1562 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33081672
MGI SNP Detail		 Chr7:126048747 Atp2a1 within coordinates of
Tssr74680 1571 bp upstream
 SNP A/C A A A A A A A A A C A A C A
rs238614473
MGI SNP Detail		 Chr7:126048794 Atp2a1 within coordinates of
Tssr74680 1618 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs250117321
MGI SNP Detail		 Chr7:126048844 Atp2a1 within coordinates of
Tssr74680 1668 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217823022
MGI SNP Detail		 Chr7:126048859 Atp2a1 within coordinates of
Tssr74680 1683 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C C C C C C C C C T C C C C
rs248333729
MGI SNP Detail		 Chr7:126048885 Atp2a1 within coordinates of
Tssr74680 1709 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C C C C C C C C C T C C C C
rs217383240
MGI SNP Detail		 Chr7:126048915 Atp2a1 within coordinates of
Tssr74680 1739 bp upstream
 SNP A/G G A
rs232332622
MGI SNP Detail		 Chr7:126048919 Atp2a1 within coordinates of
Tssr74680 1743 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs247684157
MGI SNP Detail		 Chr7:126049033 Atp2a1 within coordinates of
Tssr74680 1857 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262712023
MGI SNP Detail		 Chr7:126049041 Atp2a1 within coordinates of
Tssr74680 1865 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs226269363
MGI SNP Detail		 Chr7:126049043 Atp2a1 within coordinates of
Tssr74680 1867 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs243954443
MGI SNP Detail		 Chr7:126049054 Atp2a1 within coordinates of
Tssr74680 1878 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212989562
MGI SNP Detail		 Chr7:126049095 Atp2a1 within coordinates of
Tssr74680 1919 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33082565
MGI SNP Detail		 Chr7:126049110 Atp2a1 within coordinates of
Tssr74680 1934 bp upstream
 SNP A/G A A A A A G A A A G A A G A
rs33082568
MGI SNP Detail		 Chr7:126049129 Atp2a1 within coordinates of
Tssr74680 1953 bp upstream
 SNP C/T C C C C C T C C C C C C C C
rs218609505
MGI SNP Detail		 Chr7:126049166 Atp2a1 within coordinates of
Tssr74680 1990 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 73 of 73
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory