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Mouse SNP Summary
Symbol
Name
ID 		Tssr77124
transcription start site region 77124
MGI:6004891

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263725304
MGI SNP Detail		 Chr8:45501999 Fat1 within coordinates of
Tssr77124 1958 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224689759
MGI SNP Detail		 Chr8:45502004 Fat1 within coordinates of
Tssr77124 1953 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs247407373
MGI SNP Detail		 Chr8:45502104 Fat1 within coordinates of
Tssr77124 1853 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258156574
MGI SNP Detail		 Chr8:45502113 Fat1 within coordinates of
Tssr77124 1844 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs37161349
MGI SNP Detail		 Chr8:45502124 Fat1 within coordinates of
Tssr77124 1833 bp upstream
 SNP A/T A A A A A A T A A A T A A T T
rs37041775
MGI SNP Detail		 Chr8:45502202 Fat1 within coordinates of
Tssr77124 1755 bp upstream
 SNP A/G A A A A A A A A A A A A A A G
rs256258813
MGI SNP Detail		 Chr8:45502221 Fat1 within coordinates of
Tssr77124 1736 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs36502941
MGI SNP Detail		 Chr8:45502296 Fat1 within coordinates of
Tssr77124 1661 bp upstream
 SNP C/T C C C C C C T C C C C C C C C
rs37292431
MGI SNP Detail		 Chr8:45502384 Fat1 within coordinates of
Tssr77124 1573 bp upstream
 SNP A/G A A A A A A G A A A A A A A A
rs254316882
MGI SNP Detail		 Chr8:45502478 Fat1 within coordinates of
Tssr77124 1479 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265806726
MGI SNP Detail		 Chr8:45502500 Fat1 within coordinates of
Tssr77124 1457 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231767096
MGI SNP Detail		 Chr8:45502501 Fat1 within coordinates of
Tssr77124 1456 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs37203410
MGI SNP Detail		 Chr8:45502508 Fat1 within coordinates of
Tssr77124 1449 bp upstream
 SNP C/T C C C C C C C C C C C C T C
rs213823282
MGI SNP Detail		 Chr8:45502523 Fat1 within coordinates of
Tssr77124 1434 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230837393
MGI SNP Detail		 Chr8:45502524 Fat1 within coordinates of
Tssr77124 1433 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs37303646
MGI SNP Detail		 Chr8:45502537 Fat1 within coordinates of
Tssr77124 1420 bp upstream
 SNP A/G G G G G G G A G G G A G G A G
rs211974952
MGI SNP Detail		 Chr8:45502594 Fat1 within coordinates of
Tssr77124 1363 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A T A A A T A A A A A A T A A A A A A A T A A A A
rs242877809
MGI SNP Detail		 Chr8:45502635 Fat1 within coordinates of
Tssr77124 1322 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T G T T T G T T T T T T G T T T T T T T G T T T T
rs260286426
MGI SNP Detail		 Chr8:45502685 Fat1 within coordinates of
Tssr77124 1272 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C T T T T T T C T T T T T T T C T T T T
rs37447896
MGI SNP Detail		 Chr8:45502811 Fat1 within coordinates of
Tssr77124 1146 bp upstream
 SNP C/T C C C C C C T C C C C C C C C
rs237560873
MGI SNP Detail		 Chr8:45502812 Fat1 within coordinates of
Tssr77124 1145 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36318300
MGI SNP Detail		 Chr8:45502950 Fat1 within coordinates of
Tssr77124 1007 bp upstream
 SNP C/T C C C C C C C C C C C C C T C
rs219391293
MGI SNP Detail		 Chr8:45503012 Fat1 within coordinates of
Tssr77124 945 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237808038
MGI SNP Detail		 Chr8:45503072 Fat1 within coordinates of
Tssr77124 885 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227071735
MGI SNP Detail		 Chr8:45503203 Fat1 within coordinates of
Tssr77124 754 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250498041
MGI SNP Detail		 Chr8:45503224 Fat1 within coordinates of
Tssr77124 733 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs263841406
MGI SNP Detail		 Chr8:45503242 Fat1 within coordinates of
Tssr77124 715 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs232527223
MGI SNP Detail		 Chr8:45503283 Fat1 within coordinates of
Tssr77124 674 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T G T T T T T T G T T T T T T T G T T T T
rs238447646
MGI SNP Detail		 Chr8:45503293 Fat1 within coordinates of
Tssr77124 664 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G A G G G A G G G G G G A G G G G G G G A G G G G
rs255443114
MGI SNP Detail		 Chr8:45503605 Fat1 within coordinates of
Tssr77124 352 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224452029
MGI SNP Detail		 Chr8:45503674 Fat1 within coordinates of
Tssr77124 283 bp upstream
 SNP A/G/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A T A A A A A A A G A A A A
rs242505041
MGI SNP Detail		 Chr8:45503782 Fat1 within coordinates of
Tssr77124 175 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs36725506
MGI SNP Detail		 Chr8:45503903 Fat1 within coordinates of
Tssr77124 54 bp upstream
 SNP A/G A A A A A A G A A A G A A G G
rs38005398
MGI SNP Detail		 Chr8:45504017 Fat1 within coordinates of
Tssr77124 47 bp downstream
 SNP C/T T T T T T T C T T T C T T C T
rs259030754
MGI SNP Detail		 Chr8:45504271 Cpgi20295 within coordinates of
Fat1 within coordinates of
Tssr77124 301 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216651128
MGI SNP Detail		 Chr8:45504371 Cpgi20295 within coordinates of
Fat1 within coordinates of
Tssr77124 401 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs239903335
MGI SNP Detail		 Chr8:45504380 Cpgi20295 within coordinates of
Fat1 within coordinates of
Tssr77124 410 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs251687804
MGI SNP Detail		 Chr8:45504386 Cpgi20295 within coordinates of
Fat1 within coordinates of
Tssr77124 416 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs38777796
MGI SNP Detail		 Chr8:45504544 Cpgi20295 within coordinates of
Fat1 within coordinates of
Tssr77124 574 bp downstream
Tssr77125 within coordinates of
 SNP C/T C C C C C C C C C C C C C T C
rs37351677
MGI SNP Detail		 Chr8:45504562 Cpgi20295 within coordinates of
Fat1 within coordinates of
Tssr77124 592 bp downstream
Tssr77125 within coordinates of
 SNP A/G G G G G G G G G G G G G G G A
rs249431238
MGI SNP Detail		 Chr8:45504713 Fat1 within coordinates of
Tssr77124 743 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581362113
MGI SNP Detail		 Chr8:45504835 Fat1 within coordinates of
Tssr77124 865 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G T G G G G G G G G G T G G G G G G G G G G T G G G G G G G G G G
rs226871101
MGI SNP Detail		 Chr8:45504843 Fat1 within coordinates of
Tssr77124 873 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G T G G G T G G G G G G G G G G G G G G G G G
rs247826076
MGI SNP Detail		 Chr8:45504848 Fat1 within coordinates of
Tssr77124 878 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C T C
rs263490955
MGI SNP Detail		 Chr8:45504884 Fat1 within coordinates of
Tssr77124 914 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36779773
MGI SNP Detail		 Chr8:45504974 Fat1 within coordinates of
Tssr77124 1004 bp downstream
 SNP A/G G G G G G A
rs238796858
MGI SNP Detail		 Chr8:45504984 Fat1 within coordinates of
Tssr77124 1014 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs36564674
MGI SNP Detail		 Chr8:45505294 Fat1 within coordinates of
Tssr77124 1324 bp downstream
 SNP A/C A A A A A A C A A A A A A A
rs224524099
MGI SNP Detail		 Chr8:45505328 Tssr77124 1358 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs584906844
MGI SNP Detail		 Chr8:45505371 Tssr77124 1401 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A A A A G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235934971
MGI SNP Detail		 Chr8:45505394 Tssr77124 1424 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264513388
MGI SNP Detail		 Chr8:45505440 Rr662830 within coordinates of
Tssr77124 1470 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234223714
MGI SNP Detail		 Chr8:45505466 Tssr77124 1496 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs253823466
MGI SNP Detail		 Chr8:45505473 Tssr77124 1503 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C C C C C C C C C G C C G C
rs216976631
MGI SNP Detail		 Chr8:45505491 Tssr77124 1521 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs231526130
MGI SNP Detail		 Chr8:45505494 Tssr77124 1524 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T C T
rs37045495
MGI SNP Detail		 Chr8:45505518 Tssr77124 1548 bp downstream
 SNP C/T T T C
rs36950440
MGI SNP Detail		 Chr8:45505519 Tssr77124 1549 bp downstream
 SNP A/G G G G A
rs213625287
MGI SNP Detail		 Chr8:45505586 Tssr77124 1616 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T G T T T T T T G T T T T T T T G T T T
rs579318297
MGI SNP Detail		 Chr8:45505590 Tssr77124 1620 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A A A A A A A A G A A G A
rs230339238
MGI SNP Detail		 Chr8:45505609 Tssr77124 1639 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs37508878
MGI SNP Detail		 Chr8:45505611 Tssr77124 1641 bp downstream
 SNP G/T G G G G T T
rs249244525
MGI SNP Detail		 Chr8:45505625 Tssr77124 1655 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs582737446
MGI SNP Detail		 Chr8:45505648 Tssr77124 1678 bp downstream
 SNP A/G/T T T T T T T T T T T T T T T T T T T T A T T G T T T T G T T T T T T T T T T T T T T T T T T T G T T A T
rs218874629
MGI SNP Detail		 Chr8:45505697 Tssr77124 1727 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A G A
rs241781949
MGI SNP Detail		 Chr8:45505701 Tssr77124 1731 bp downstream
 SNP A/C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G C G G G G G C G G G G G G C G G G G G G G A G G C G
rs259174703
MGI SNP Detail		 Chr8:45505725 Tssr77124 1755 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224577854
MGI SNP Detail		 Chr8:45505756 Tssr77124 1786 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238652865
MGI SNP Detail		 Chr8:45505800 Tssr77124 1830 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs250121991
MGI SNP Detail		 Chr8:45505801 Tssr77124 1831 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs38173285
MGI SNP Detail		 Chr8:45505830 Tssr77124 1860 bp downstream
 SNP C/T T T C C C C
rs235946824
MGI SNP Detail		 Chr8:45505835 Tssr77124 1865 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs266151470
MGI SNP Detail		 Chr8:45505839 Tssr77124 1869 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36369046
MGI SNP Detail		 Chr8:45505845 Tssr77124 1875 bp downstream
 SNP C/T T T C C T
rs249401023
MGI SNP Detail		 Chr8:45505877 Tssr77124 1907 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs37023401
MGI SNP Detail		 Chr8:45505889 Tssr77124 1919 bp downstream
 SNP C/T C C T
rs227270506
MGI SNP Detail		 Chr8:45505949 Tssr77124 1979 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 77 of 77
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory