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Mouse SNP Summary
Symbol
Name
ID 		Tssr77658
transcription start site region 77658
MGI:6005425

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs225742597
MGI SNP Detail		 Chr8:69539421 Slc18a1 within coordinates of
Tssr77658 1984 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs581005826
MGI SNP Detail		 Chr8:69539473 Slc18a1 within coordinates of
Tssr77658 1932 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs255405868
MGI SNP Detail		 Chr8:69539498 Slc18a1 within coordinates of
Tssr77658 1907 bp upstream
 SNP A/C A A A C C A A A A A A C C C C C C A C A A C A A A A C A A A A A C C C A A A A C A A A A A A A C A A C A
rs220751830
MGI SNP Detail		 Chr8:69539527 Slc18a1 within coordinates of
Tssr77658 1878 bp upstream
 SNP A/C C C A A C C C C C C A A A A A A C A C C A C C C C A C C C C C A A C C C C A C C C C C C C A C C A C
rs213796430
MGI SNP Detail		 Chr8:69539563 Slc18a1 within coordinates of
Tssr77658 1842 bp upstream
 SNP A/G G A
rs224645192
MGI SNP Detail		 Chr8:69539584 Slc18a1 within coordinates of
Tssr77658 1821 bp upstream
 SNP G G G
rs220498910
MGI SNP Detail		 Chr8:69539629 Slc18a1 within coordinates of
Tssr77658 1776 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs36274162
MGI SNP Detail		 Chr8:69539657 Slc18a1 within coordinates of
Tssr77658 1748 bp upstream
 SNP A/T A T A A A T A A A T T A T A A
rs38395301
MGI SNP Detail		 Chr8:69539704 Slc18a1 within coordinates of
Tssr77658 1701 bp upstream
 SNP A/G G G G G G A G G G G G G G
rs39051764
MGI SNP Detail		 Chr8:69539709 Slc18a1 within coordinates of
Tssr77658 1696 bp upstream
 SNP C/T C T C C C T C C C C T T C T C T
rs36989607
MGI SNP Detail		 Chr8:69539732 Slc18a1 within coordinates of
Tssr77658 1673 bp upstream
 SNP C/G G C G G G C G G G G C C G C G G
rs263553077
MGI SNP Detail		 Chr8:69539793 Slc18a1 within coordinates of
Tssr77658 1612 bp upstream
 SNP A A A
rs36815680
MGI SNP Detail		 Chr8:69539798 Slc18a1 within coordinates of
Tssr77658 1607 bp upstream
 SNP A/C C C C C A C C A C A A
rs584723534
MGI SNP Detail		 Chr8:69539879 Slc18a1 within coordinates of
Tssr77658 1526 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs245925502
MGI SNP Detail		 Chr8:69539928 Slc18a1 within coordinates of
Tssr77658 1477 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs223648808
MGI SNP Detail		 Chr8:69540083 Slc18a1 within coordinates of
Tssr77658 1322 bp upstream
 SNP C/T C C C T C T C C C C C C T T T T T T C T C C T C C C C T C C C C C T T T C C C C T C C C C C C C C C C C C
rs215249963
MGI SNP Detail		 Chr8:69540133 Slc18a1 within coordinates of
Tssr77658 1272 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228113917
MGI SNP Detail		 Chr8:69540257 Slc18a1 within coordinates of
Tssr77658 1148 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs248094779
MGI SNP Detail		 Chr8:69540286 Slc18a1 within coordinates of
Tssr77658 1119 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs49801632
MGI SNP Detail		 Chr8:69540413 Slc18a1 within coordinates of
Tssr77658 992 bp upstream
 SNP C/T T C T T
rs240306577
MGI SNP Detail		 Chr8:69540422 Slc18a1 within coordinates of
Tssr77658 983 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260773320
MGI SNP Detail		 Chr8:69540472 Slc18a1 within coordinates of
Tssr77658 933 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212730323
MGI SNP Detail		 Chr8:69540562 Slc18a1 within coordinates of
Tssr77658 843 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs37073664
MGI SNP Detail		 Chr8:69540567 Slc18a1 within coordinates of
Tssr77658 838 bp upstream
 SNP C/T C C T C C C C C C C C T T C T C C
rs37969427
MGI SNP Detail		 Chr8:69540578 Slc18a1 within coordinates of
Tssr77658 827 bp upstream
 SNP C/T C C T C C C T C C C C T T C T C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs38859733
MGI SNP Detail		 Chr8:69540632 Slc18a1 within coordinates of
Tssr77658 773 bp upstream
 SNP A/G A G A A A G A A A A G G A G A G
rs239653501
MGI SNP Detail		 Chr8:69540638 Slc18a1 within coordinates of
Tssr77658 767 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs37527303
MGI SNP Detail		 Chr8:69540652 Slc18a1 within coordinates of
Tssr77658 753 bp upstream
 SNP C/T T T T T T T T T T T T T T T C
rs51847284
MGI SNP Detail		 Chr8:69540662 Slc18a1 within coordinates of
Tssr77658 743 bp upstream
 SNP G/T G T G G
rs107717999
MGI SNP Detail		 Chr8:69540671 Slc18a1 within coordinates of
Tssr77658 734 bp upstream
 SNP C/T C T C C
rs45703719
MGI SNP Detail		 Chr8:69540693 Slc18a1 within coordinates of
Tssr77658 712 bp upstream
 SNP A/T T A T T T
rs226094382
MGI SNP Detail		 Chr8:69540726 Slc18a1 within coordinates of
Tssr77658 679 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs240007451
MGI SNP Detail		 Chr8:69540767 Slc18a1 within coordinates of
Tssr77658 638 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs45766418
MGI SNP Detail		 Chr8:69540780 Slc18a1 within coordinates of
Tssr77658 625 bp upstream
 SNP A/G G A G G G
rs228209850
MGI SNP Detail		 Chr8:69540902 Slc18a1 within coordinates of
Tssr77658 503 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs37573089
MGI SNP Detail		 Chr8:69540922 Slc18a1 within coordinates of
Tssr77658 483 bp upstream
 SNP C/G G G G G G C G G G G G G G G
rs219353033
MGI SNP Detail		 Chr8:69540947 Slc18a1 within coordinates of
Tssr77658 458 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs36505611
MGI SNP Detail		 Chr8:69540984 Slc18a1 within coordinates of
Tssr77658 421 bp upstream
 SNP G/T T T T T T T T T T G T T T T
rs36859348
MGI SNP Detail		 Chr8:69541068 Slc18a1 within coordinates of
Tssr77658 337 bp upstream
 SNP A/G G G G G G G G G G A G G G G
rs213084608
MGI SNP Detail		 Chr8:69541090 Slc18a1 within coordinates of
Tssr77658 315 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs38222132
MGI SNP Detail		 Chr8:69541114 Slc18a1 within coordinates of
Tssr77658 291 bp upstream
 SNP A/G A A A A A A A A A G A A A A
rs37620437
MGI SNP Detail		 Chr8:69541162 Cpgi20406 within coordinates of
Rr400869 within coordinates of
Slc18a1 within coordinates of
Tssr77658 243 bp upstream
 SNP A/C A A A A A A A A A C A A A A
rs214949603
MGI SNP Detail		 Chr8:69541211 Cpgi20406 within coordinates of
Rr400869 within coordinates of
Slc18a1 within coordinates of
Tssr77658 194 bp upstream
 SNP A/C/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A C A A A A
rs233388384
MGI SNP Detail		 Chr8:69541283 Cpgi20406 within coordinates of
Rr400869 within coordinates of
Slc18a1 within coordinates of
Tssr77658 122 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C
rs263613379
MGI SNP Detail		 Chr8:69541420 Atp6v1b2 within coordinates of
Cpgi20406 within coordinates of
Rr400869 within coordinates of
Slc18a1 within coordinates of
Tssr77658 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs13470535
MGI SNP Detail		 Chr8:69541493 Atp6v1b2 within coordinates of
Cpgi20406 within coordinates of
Slc18a1 within coordinates of
Tssr77658 45 bp downstream
 SNP A/C C C C C C C A C C C C C C C A C
rs33179000
MGI SNP Detail		 Chr8:69541601 Atp6v1b2 within coordinates of
Cpgi20406 within coordinates of
Slc18a1 within coordinates of
Tssr77658 153 bp downstream
 SNP G/T T T G G G T T G G G G G T G
rs256626494
MGI SNP Detail		 Chr8:69541606 Atp6v1b2 within coordinates of
Cpgi20406 within coordinates of
Slc18a1 within coordinates of
Tssr77658 158 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36540833
MGI SNP Detail		 Chr8:69541638 Atp6v1b2 within coordinates of
Cpgi20406 within coordinates of
Slc18a1 within coordinates of
Tssr77658 190 bp downstream
 SNP A/C C C C C C C C C C C C C C A
rs37348916
MGI SNP Detail		 Chr8:69541699 Atp6v1b2 within coordinates of
Cpgi20406 within coordinates of
Slc18a1 within coordinates of
Tssr77658 251 bp downstream
 SNP A/T A A A A A A A A A A A A A T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs38762137
MGI SNP Detail		 Chr8:69541727 Atp6v1b2 within coordinates of
Cpgi20406 within coordinates of
Slc18a1 within coordinates of
Tssr77658 279 bp downstream
 SNP C/G G G G G G G G G G C G G G G
rs259411078
MGI SNP Detail		 Chr8:69541898 Atp6v1b2 within coordinates of
Cpgi20406 within coordinates of
Tssr77658 450 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228184563
MGI SNP Detail		 Chr8:69541914 Atp6v1b2 within coordinates of
Cpgi20406 within coordinates of
Tssr77658 466 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T C T
rs247678624
MGI SNP Detail		 Chr8:69541957 Atp6v1b2 within coordinates of
Cpgi20406 within coordinates of
Tssr77658 509 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs33474459
MGI SNP Detail		 Chr8:69541974 Atp6v1b2 within coordinates of
Cpgi20406 within coordinates of
Tssr77658 526 bp downstream
 SNP A/G A A G G A G G G G A A A G G G G G G
rs578405991
MGI SNP Detail		 Chr8:69542042 Atp6v1b2 within coordinates of
Cpgi20406 within coordinates of
Tssr77658 594 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs37253416
MGI SNP Detail		 Chr8:69542044 Atp6v1b2 within coordinates of
Cpgi20406 within coordinates of
Tssr77658 596 bp downstream
 SNP A/T T T T T T T A T T T T T T T A
rs227791604
MGI SNP Detail		 Chr8:69542267 Atp6v1b2 within coordinates of
Tssr77658 819 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs37212225
MGI SNP Detail		 Chr8:69542273 Atp6v1b2 within coordinates of
Tssr77658 825 bp downstream
 SNP A/G A A A A A A G A A A A A A G
rs32649529
MGI SNP Detail		 Chr8:69542471 Atp6v1b2 within coordinates of
Tssr77658 1023 bp downstream
 SNP C/T C C T C C C T C C C T T C T T
rs38536676
MGI SNP Detail		 Chr8:69542481 Atp6v1b2 within coordinates of
Tssr77658 1033 bp downstream
 SNP A/T T T T T T A T T T T T T T
rs225287234
MGI SNP Detail		 Chr8:69542554 Atp6v1b2 within coordinates of
Tssr77658 1106 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244422732
MGI SNP Detail		 Chr8:69542655 Atp6v1b2 within coordinates of
Tssr77658 1207 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs33510081
MGI SNP Detail		 Chr8:69542679 Atp6v1b2 within coordinates of
Tssr77658 1231 bp downstream
 SNP A/C A C A A C
rs33036691
MGI SNP Detail		 Chr8:69542681 Atp6v1b2 within coordinates of
Tssr77658 1233 bp downstream
 SNP A/C A C A A C
rs32961565
MGI SNP Detail		 Chr8:69542683 Atp6v1b2 within coordinates of
Tssr77658 1235 bp downstream
 SNP A/C A C A
rs32672759
MGI SNP Detail		 Chr8:69542685 Atp6v1b2 within coordinates of
Tssr77658 1237 bp downstream
 SNP A/C A C A
rs581891436
MGI SNP Detail		 Chr8:69542687 Atp6v1b2 within coordinates of
Tssr77658 1239 bp downstream
 SNP A/C C C C C C C C C A C C C C C C A A A C C C C C C C A C C C A A C C C C C C C C C
rs38973480
MGI SNP Detail		 Chr8:69542799 Atp6v1b2 within coordinates of
Tssr77658 1351 bp downstream
 SNP C/G G G G G G G G G G G G G G G C
rs233371818
MGI SNP Detail		 Chr8:69542877 Atp6v1b2 within coordinates of
Tssr77658 1429 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs36575170
MGI SNP Detail		 Chr8:69542956 Atp6v1b2 within coordinates of
Tssr77658 1508 bp downstream
 SNP C/T T T T T T T T T T T C T T T T
rs36521616
MGI SNP Detail		 Chr8:69542981 Atp6v1b2 within coordinates of
Tssr77658 1533 bp downstream
 SNP A/C C C C C C C C C C C C C C C A
rs39300684
MGI SNP Detail		 Chr8:69543113 Atp6v1b2 within coordinates of
Tssr77658 1665 bp downstream
 SNP A/C A A A A A A A A A A A A A C
rs37544399
MGI SNP Detail		 Chr8:69543155 Atp6v1b2 within coordinates of
Tssr77658 1707 bp downstream
 SNP C/T T C C T T C C C T T T C C C C C
rs37668345
MGI SNP Detail		 Chr8:69543168 Atp6v1b2 within coordinates of
Tssr77658 1720 bp downstream
 SNP A/G A A A A A A A A A A A A A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219862582
MGI SNP Detail		 Chr8:69543188 Atp6v1b2 within coordinates of
Tssr77658 1740 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs253106406
MGI SNP Detail		 Chr8:69543434 Atp6v1b2 within coordinates of
Tssr77658 1986 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 77 of 77
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory