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Mouse SNP Summary
Symbol
Name
ID 		Tssr77720
transcription start site region 77720
MGI:6005487

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Showing SNP(s) 1 - 63 of 63

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219532742
MGI SNP Detail		 Chr8:70685314 Armc6 within coordinates of
Tssr77720 1977 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A G
rs238619616
MGI SNP Detail		 Chr8:70685412 Armc6 within coordinates of
Tssr77720 1879 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A T
rs257521005
MGI SNP Detail		 Chr8:70685491 Armc6 within coordinates of
Tssr77720 1800 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A C
rs225265683
MGI SNP Detail		 Chr8:70685565 Armc6 within coordinates of
Tssr77720 1726 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A G
rs250643401
MGI SNP Detail		 Chr8:70685640 Armc6 within coordinates of
Tssr77720 1651 bp upstream
 SNP A/G A A A A A A A A A G G A A A A G G
rs264625404
MGI SNP Detail		 Chr8:70685654 Armc6 within coordinates of
Tssr77720 1637 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G A
rs227694435
MGI SNP Detail		 Chr8:70685665 Armc6 within coordinates of
Tssr77720 1626 bp upstream
 SNP C/T T T T T T T T T T C T T T T T T C
rs583128197
MGI SNP Detail		 Chr8:70685689 Armc6 within coordinates of
Tssr77720 1602 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G A
rs243979129
MGI SNP Detail		 Chr8:70685737 Armc6 within coordinates of
Tssr77720 1554 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T G
rs257297527
MGI SNP Detail		 Chr8:70685745 Armc6 within coordinates of
Tssr77720 1546 bp upstream
 SNP G/T T T T T T T T T T T G T T T T G T
rs226366623
MGI SNP Detail		 Chr8:70685755 Armc6 within coordinates of
Tssr77720 1536 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A G
rs246285683
MGI SNP Detail		 Chr8:70685759 Armc6 within coordinates of
Tssr77720 1532 bp upstream
 SNP A/G A A A A A A A A A G G A A A A G G
rs215771783
MGI SNP Detail		 Chr8:70685837 Armc6 within coordinates of
Tssr77720 1454 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A G
rs239413302
MGI SNP Detail		 Chr8:70685843 Armc6 within coordinates of
Tssr77720 1448 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G A
rs260147714
MGI SNP Detail		 Chr8:70685913 Armc6 within coordinates of
Tssr77720 1378 bp upstream
 SNP A/G G G G G G G G G G A G G G G G G A
rs212022830
MGI SNP Detail		 Chr8:70686057 Armc6 within coordinates of
Tssr77720 1234 bp upstream
 SNP C/T T T T T T T T T T C T T T T T T C
rs236295963
MGI SNP Detail		 Chr8:70686087 Armc6 within coordinates of
Tssr77720 1204 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G T
rs248995525
MGI SNP Detail		 Chr8:70686205 Armc6 within coordinates of
Tssr77720 1086 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs219467641
MGI SNP Detail		 Chr8:70686302 Armc6 within coordinates of
Tssr77720 989 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A
rs33068473
MGI SNP Detail		 Chr8:70686569 Armc6 within coordinates of
Cpgi20446 within coordinates of
Tssr77720 722 bp upstream
 SNP A/G A A G G A A A
rs251432533
MGI SNP Detail		 Chr8:70686601 Armc6 within coordinates of
Cpgi20446 within coordinates of
Tssr77720 690 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225513426
MGI SNP Detail		 Chr8:70686635 Armc6 within coordinates of
Cpgi20446 within coordinates of
Tssr77720 656 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32633103
MGI SNP Detail		 Chr8:70686704 Armc6 within coordinates of
Cpgi20446 within coordinates of
Tssr77720 587 bp upstream
 SNP A/G A A G G A
rs266230544
MGI SNP Detail		 Chr8:70686761 Armc6 within coordinates of
Cpgi20446 within coordinates of
Tssr77720 530 bp upstream
Tssr81601 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G G G G G G G G G G G
rs220947761
MGI SNP Detail		 Chr8:70686765 Armc6 within coordinates of
Cpgi20446 within coordinates of
Tssr77720 526 bp upstream
Tssr81601 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33610974
MGI SNP Detail		 Chr8:70686809 Armc6 within coordinates of
Cpgi20446 within coordinates of
Tssr77720 482 bp upstream
Tssr81601 within coordinates of
 SNP C/T T T C C T T T
rs257217191
MGI SNP Detail		 Chr8:70686867 Armc6 within coordinates of
Cpgi20446 within coordinates of
Sugp2 within coordinates of
Tssr77717 within coordinates of
Tssr77720 424 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs226287840
MGI SNP Detail		 Chr8:70686928 Armc6 within coordinates of
Cpgi20446 within coordinates of
Sugp2 within coordinates of
Tssr77720 363 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T
rs586536272
MGI SNP Detail		 Chr8:70687292 Cpgi20446 within coordinates of
Rr400897 within coordinates of
Sugp2 within coordinates of
Tssr77720 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs52197444
MGI SNP Detail		 Chr8:70687335 Cpgi20446 within coordinates of
Sugp2 within coordinates of
Tssr77720 30 bp downstream
 SNP G/T G G T G
rs263476251
MGI SNP Detail		 Chr8:70687441 Cpgi20446 within coordinates of
Sugp2 within coordinates of
Tssr77720 136 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs46965955
MGI SNP Detail		 Chr8:70687512 Cpgi20446 within coordinates of
Sugp2 within coordinates of
Tssr77720 207 bp downstream
 SNP G G G G G
rs579670182
MGI SNP Detail		 Chr8:70687513 Cpgi20446 within coordinates of
Sugp2 within coordinates of
Tssr77720 208 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs254612477
MGI SNP Detail		 Chr8:70687635 Sugp2 within coordinates of
Tssr77720 330 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212150678
MGI SNP Detail		 Chr8:70687719 Sugp2 within coordinates of
Tssr77720 414 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228700863
MGI SNP Detail		 Chr8:70687731 Sugp2 within coordinates of
Tssr77720 426 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46259766
MGI SNP Detail		 Chr8:70687769 Sugp2 within coordinates of
Tssr77720 464 bp downstream
 SNP A/G A G A A
rs213717773
MGI SNP Detail		 Chr8:70687822 Sugp2 within coordinates of
Tssr77720 517 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs583947341
MGI SNP Detail		 Chr8:70687857 Sugp2 within coordinates of
Tssr77720 552 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs587154314
MGI SNP Detail		 Chr8:70687889 Sugp2 within coordinates of
Tssr77720 584 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs581260151
MGI SNP Detail		 Chr8:70687934 Sugp2 within coordinates of
Tssr77720 629 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs232233747
MGI SNP Detail		 Chr8:70687971 Sugp2 within coordinates of
Tssr77720 666 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs251359326
MGI SNP Detail		 Chr8:70688003 Sugp2 within coordinates of
Tssr77720 698 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216933511
MGI SNP Detail		 Chr8:70688026 Sugp2 within coordinates of
Tssr77720 721 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs584673717
MGI SNP Detail		 Chr8:70688369 Sugp2 within coordinates of
Tssr77720 1064 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs586923832
MGI SNP Detail		 Chr8:70688494 Sugp2 within coordinates of
Tssr77720 1189 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242381222
MGI SNP Detail		 Chr8:70688581 Sugp2 within coordinates of
Tssr77720 1276 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs261112400
MGI SNP Detail		 Chr8:70688590 Sugp2 within coordinates of
Tssr77720 1285 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T T G G G G G G G T G G G G G G G
rs220465952
MGI SNP Detail		 Chr8:70688680 Sugp2 within coordinates of
Tssr77720 1375 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51002911
MGI SNP Detail		 Chr8:70688683 Sugp2 within coordinates of
Tssr77720 1378 bp downstream
 SNP C/T C T C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251604994
MGI SNP Detail		 Chr8:70688846 Sugp2 within coordinates of
Tssr77720 1541 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs51029010
MGI SNP Detail		 Chr8:70688968 Sugp2 within coordinates of
Tssr77720 1663 bp downstream
 SNP C/T T C T T T
rs48254996
MGI SNP Detail		 Chr8:70688976 Sugp2 within coordinates of
Tssr77720 1671 bp downstream
 SNP A/C C A C C
rs265647634
MGI SNP Detail		 Chr8:70688990 Sugp2 within coordinates of
Tssr77720 1685 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs49030733
MGI SNP Detail		 Chr8:70689005 Sugp2 within coordinates of
Tssr77720 1700 bp downstream
 SNP C/T C T C C
rs47052889
MGI SNP Detail		 Chr8:70689014 Sugp2 within coordinates of
Tssr77720 1709 bp downstream
 SNP A/T A T A A
rs261385550
MGI SNP Detail		 Chr8:70689025 Sugp2 within coordinates of
Tssr77720 1720 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs263616334
MGI SNP Detail		 Chr8:70689045 Sugp2 within coordinates of
Tssr77720 1740 bp downstream
 SNP G G G
rs243796976
MGI SNP Detail		 Chr8:70689071 Sugp2 within coordinates of
Tssr77720 1766 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs214386254
MGI SNP Detail		 Chr8:70689079 Sugp2 within coordinates of
Tssr77720 1774 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232169118
MGI SNP Detail		 Chr8:70689114 Sugp2 within coordinates of
Tssr77720 1809 bp downstream
 SNP G G G
rs252363508
MGI SNP Detail		 Chr8:70689170 Sugp2 within coordinates of
Tssr77720 1865 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217339867
MGI SNP Detail		 Chr8:70689280 Sugp2 within coordinates of
Tssr77720 1975 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 63 of 63
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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