About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Tssr77829
transcription start site region 77829
MGI:6005596

<< first < prev1 next > last >>
Showing SNP(s) 1 - 50 of 50

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253014303
MGI SNP Detail		 Chr8:71227589 Pik3r2 within coordinates of
Rr186787 within coordinates of
Tssr77829 1902 bp upstream
 SNP A/T A A A A T A A A A T A A A A A A A A A A A T A A A A A A A A A A T A A A A A A T A A A A A A A A A A A A
rs218104015
MGI SNP Detail		 Chr8:71227632 Pik3r2 within coordinates of
Rr186787 within coordinates of
Tssr77829 1859 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581471241
MGI SNP Detail		 Chr8:71227661 Pik3r2 within coordinates of
Rr186787 within coordinates of
Tssr77829 1830 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G
rs229181504
MGI SNP Detail		 Chr8:71227690 Pik3r2 within coordinates of
Rr186787 within coordinates of
Tssr77829 1801 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247524247
MGI SNP Detail		 Chr8:71227834 Pik3r2 within coordinates of
Rr186787 within coordinates of
Tssr77829 1657 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs47224623
MGI SNP Detail		 Chr8:71227988 Pik3r2 within coordinates of
Rr186787 within coordinates of
Tssr77829 1503 bp upstream
 SNP G G G G
rs230791003
MGI SNP Detail		 Chr8:71228000 Pik3r2 within coordinates of
Rr186787 within coordinates of
Tssr77829 1491 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260177574
MGI SNP Detail		 Chr8:71228208 Pik3r2 within coordinates of
Rr186787 within coordinates of
Tssr77829 1283 bp upstream
 SNP A A A
rs578554448
MGI SNP Detail		 Chr8:71228336 Pik3r2 within coordinates of
Rr186787 within coordinates of
Tssr77829 1155 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T
rs582255890
MGI SNP Detail		 Chr8:71228337 Pik3r2 within coordinates of
Rr186787 within coordinates of
Tssr77829 1154 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C
rs214933908
MGI SNP Detail		 Chr8:71228347 Pik3r2 within coordinates of
Rr186787 within coordinates of
Tssr77829 1144 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585061959
MGI SNP Detail		 Chr8:71228444 Pik3r2 within coordinates of
Rr186787 within coordinates of
Tssr77829 1047 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T
rs578501722
MGI SNP Detail		 Chr8:71228445 Pik3r2 within coordinates of
Rr186787 within coordinates of
Tssr77829 1046 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C
rs240354221
MGI SNP Detail		 Chr8:71228520 Cpgi20500 within coordinates of
Pik3r2 within coordinates of
Rr186787 within coordinates of
Tssr77829 971 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs51959967
MGI SNP Detail		 Chr8:71228633 Cpgi20500 within coordinates of
Pik3r2 within coordinates of
Rr186787 within coordinates of
Tssr77829 858 bp upstream
 SNP A/G G A A A
rs226664963
MGI SNP Detail		 Chr8:71228652 Cpgi20500 within coordinates of
Pik3r2 within coordinates of
Rr186787 within coordinates of
Tssr77829 839 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G T T
rs243078969
MGI SNP Detail		 Chr8:71228668 Cpgi20500 within coordinates of
Pik3r2 within coordinates of
Rr186787 within coordinates of
Tssr77829 823 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227524003
MGI SNP Detail		 Chr8:71229092 Cpgi20500 within coordinates of
Pik3r2 within coordinates of
Rr186787 within coordinates of
Tssr77829 399 bp upstream
 SNP A A A
rs218609787
MGI SNP Detail		 Chr8:71229101 Cpgi20500 within coordinates of
Pik3r2 within coordinates of
Rr186787 within coordinates of
Tssr77829 390 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238519693
MGI SNP Detail		 Chr8:71229120 Cpgi20500 within coordinates of
Pik3r2 within coordinates of
Rr186787 within coordinates of
Tssr77829 371 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs265232056
MGI SNP Detail		 Chr8:71229135 Cpgi20500 within coordinates of
Pik3r2 within coordinates of
Rr186787 within coordinates of
Tssr77829 356 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs223961805
MGI SNP Detail		 Chr8:71229166 Cpgi20500 within coordinates of
Pik3r2 within coordinates of
Rr186787 within coordinates of
Tssr77829 325 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs245182527
MGI SNP Detail		 Chr8:71229202 Cpgi20500 within coordinates of
Pik3r2 within coordinates of
Rr186787 within coordinates of
Tssr77829 289 bp upstream
 SNP C/T T C
rs263936562
MGI SNP Detail		 Chr8:71229252 Cpgi20500 within coordinates of
Pik3r2 within coordinates of
Rr186787 within coordinates of
Tssr77829 239 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs582809467
MGI SNP Detail		 Chr8:71229323 Cpgi20500 within coordinates of
Pik3r2 within coordinates of
Rr186787 within coordinates of
Rr400915 within coordinates of
Tssr77829 168 bp upstream
Tssr81674 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229219606
MGI SNP Detail		 Chr8:71229468 Cpgi20500 within coordinates of
Rr186787 within coordinates of
Rr400915 within coordinates of
Tssr77828 within coordinates of
Tssr77829 23 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs242333651
MGI SNP Detail		 Chr8:71229497 Cpgi20500 within coordinates of
Rr186787 within coordinates of
Rr400915 within coordinates of
Tssr77829 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C T C C C C C C C C C C
rs254595365
MGI SNP Detail		 Chr8:71229530 2010320M18Rik within coordinates of
Cpgi20500 within coordinates of
Rr186787 within coordinates of
Rr400915 within coordinates of
Tssr77829 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C T C C C C C C C C C C
rs224513541
MGI SNP Detail		 Chr8:71229544 2010320M18Rik within coordinates of
Cpgi20500 within coordinates of
Rr186787 within coordinates of
Rr400915 within coordinates of
Tssr77829 3 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C
rs586506366
MGI SNP Detail		 Chr8:71229575 2010320M18Rik within coordinates of
Cpgi20500 within coordinates of
Rr186787 within coordinates of
Tssr77829 34 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G
rs250762386
MGI SNP Detail		 Chr8:71229669 2010320M18Rik within coordinates of
Cpgi20500 within coordinates of
Rr186787 within coordinates of
Tssr77829 128 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215397692
MGI SNP Detail		 Chr8:71229723 2010320M18Rik within coordinates of
Cpgi20500 within coordinates of
Rr186787 within coordinates of
Tssr77829 182 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T T T T T T T T T T T T T T C T T T T
rs238021848
MGI SNP Detail		 Chr8:71229936 2010320M18Rik within coordinates of
Cpgi20500 within coordinates of
Rr186787 within coordinates of
Rr368551 within coordinates of
Tssr77829 395 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G T T
rs580196029
MGI SNP Detail		 Chr8:71230137 2010320M18Rik within coordinates of
Cpgi20500 within coordinates of
Rr186787 within coordinates of
Tssr77829 596 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs3700656
MGI SNP Detail		 Chr8:71230215 2010320M18Rik within coordinates of
Cpgi20500 within coordinates of
Rr186787 within coordinates of
Tssr77829 674 bp downstream
 SNP A/T T T A A T T T
rs218500591
MGI SNP Detail		 Chr8:71230371 Rr186787 within coordinates of
Tssr77829 830 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs583365948
MGI SNP Detail		 Chr8:71230491 Rr186787 within coordinates of
Tssr77829 950 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs236661561
MGI SNP Detail		 Chr8:71230544 Rr186787 within coordinates of
Tssr77829 1003 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs586050323
MGI SNP Detail		 Chr8:71230645 Rr186787 within coordinates of
Tssr77829 1104 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C
rs250035071
MGI SNP Detail		 Chr8:71230707 Rr186787 within coordinates of
Tssr77829 1166 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T
rs219176559
MGI SNP Detail		 Chr8:71230769 Mast3 within coordinates of
Rr186787 within coordinates of
Tssr77829 1228 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs231296627
MGI SNP Detail		 Chr8:71230791 Mast3 within coordinates of
Rr186787 within coordinates of
Tssr77829 1250 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs257508217
MGI SNP Detail		 Chr8:71230835 Mast3 within coordinates of
Rr186787 within coordinates of
Tssr77829 1294 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs223915504
MGI SNP Detail		 Chr8:71230860 Mast3 within coordinates of
Rr186787 within coordinates of
Tssr77829 1319 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs13467459
MGI SNP Detail		 Chr8:71231044 Mast3 within coordinates of
Rr186787 within coordinates of
Tssr77829 1503 bp downstream
 SNP C/T C T T C C C
rs265864546
MGI SNP Detail		 Chr8:71231084 Mast3 within coordinates of
Rr186787 within coordinates of
Tssr77829 1543 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs33297028
MGI SNP Detail		 Chr8:71231263 Mast3 within coordinates of
Tssr77829 1722 bp downstream
 SNP C/T T C C T T T
rs235751793
MGI SNP Detail		 Chr8:71231448 Mast3 within coordinates of
Tssr77829 1907 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254630874
MGI SNP Detail		 Chr8:71231457 Mast3 within coordinates of
Tssr77829 1916 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225236223
MGI SNP Detail		 Chr8:71231460 Mast3 within coordinates of
Tssr77829 1919 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
<< first < prev1 next > last >>
Showing SNP(s) 1 - 50 of 50
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
Building initial tooltip...