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Mouse SNP Summary
Symbol
Name
ID 		Tssr77875
transcription start site region 77875
MGI:6005642

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222075681
MGI SNP Detail		 Chr8:72021321 Rr186833 within coordinates of
Tssr77875 1990 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs244141057
MGI SNP Detail		 Chr8:72021339 Rr186833 within coordinates of
Tssr77875 1972 bp upstream
 SNP G/T G G G T G G G G T G G G G G G G G G G T G G G G G G G G G T G G G G G G T G G G G G G G G G G G T G
rs8262702
MGI SNP Detail		 Chr8:72021357 Rr186833 within coordinates of
Tssr77875 1954 bp upstream
 SNP C/G C C C C C C C C C C C C G
rs52130712
MGI SNP Detail		 Chr8:72021487 Rr186833 within coordinates of
Tssr77875 1824 bp upstream
 SNP C/T C T C C
rs240179319
MGI SNP Detail		 Chr8:72021536 Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77870 within coordinates of
Tssr77875 1775 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs8236731
MGI SNP Detail		 Chr8:72021671 Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 1640 bp upstream
 SNP A/G A A A A A A A A A A A A G
rs8236732
MGI SNP Detail		 Chr8:72021700 Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 1611 bp upstream
 SNP A/C A A C C A A A C A A A A A A A C
rs8236386
MGI SNP Detail		 Chr8:72021717 Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 1594 bp upstream
 SNP A/G G G A A G G G A G G G G G G G G
rs8236387
MGI SNP Detail		 Chr8:72021735 Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 1576 bp upstream
 SNP C/T C C C C C C C C C C C T C
rs8236733
MGI SNP Detail		 Chr8:72021865 Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 1446 bp upstream
 SNP G/T G G G G G G G G G G T G G G G G G G G G G G G
rs8236734
MGI SNP Detail		 Chr8:72021919 Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 1392 bp upstream
 SNP A/G A A A G G A A A G A G G A A A A G A G A A A G A G A
rs33084012
MGI SNP Detail		 Chr8:72021990 Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 1321 bp upstream
 SNP C/G G G C G G G
rs259365526
MGI SNP Detail		 Chr8:72022003 Cpgi20548 within coordinates of
Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 1308 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs8236353
MGI SNP Detail		 Chr8:72022048 Cpgi20548 within coordinates of
Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 1263 bp upstream
 SNP C/T C C C C C C C T C C C C C
rs247750839
MGI SNP Detail		 Chr8:72022086 Cpgi20548 within coordinates of
Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 1225 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs8236355
MGI SNP Detail		 Chr8:72022169 Cpgi20548 within coordinates of
Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 1142 bp upstream
 SNP C/T C C C C C C C T C C C C C
rs8262703
MGI SNP Detail		 Chr8:72022224 Cpgi20548 within coordinates of
Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 1087 bp upstream
 SNP A/G G G G G G G G G G G G G A
rs8236735
MGI SNP Detail		 Chr8:72022310 Cpgi20548 within coordinates of
Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77872 within coordinates of
Tssr77875 1001 bp upstream
 SNP A/G G G G G G G G G G G G G A
rs8262705
MGI SNP Detail		 Chr8:72022321 Cpgi20548 within coordinates of
Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77872 within coordinates of
Tssr77875 990 bp upstream
 SNP A/G G G G G G G G G G G G G A
rs238963292
MGI SNP Detail		 Chr8:72022442 Cpgi20548 within coordinates of
Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 869 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs8236359
MGI SNP Detail		 Chr8:72022469 Cpgi20548 within coordinates of
Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 842 bp upstream
 SNP G/T G G G G G G G G G G T G G G G G G G G G G G
rs8236736
MGI SNP Detail		 Chr8:72022470 Cpgi20548 within coordinates of
Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 841 bp upstream
 SNP A/G A A A A A A A A A A A A G
rs8262706
MGI SNP Detail		 Chr8:72022471 Cpgi20548 within coordinates of
Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 840 bp upstream
 SNP A/G A A A A A A A A A A A A G
rs8236360
MGI SNP Detail		 Chr8:72022519 Cpgi20548 within coordinates of
Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 792 bp upstream
 SNP C/G G G G G G G G G G G G G C
rs227366388
MGI SNP Detail		 Chr8:72022610 Cpgi20548 within coordinates of
Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 701 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32575877
MGI SNP Detail		 Chr8:72022723 Cpgi20548 within coordinates of
Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 588 bp upstream
 SNP A/C A A C C C
rs8262709
MGI SNP Detail		 Chr8:72022923 Cpgi20549 within coordinates of
Rr186833 within coordinates of
Rr400934 within coordinates of
Slc27a1 within coordinates of
Tssr77875 388 bp upstream
 SNP C/T C C C C C C C C C C C C T
rs222670727
MGI SNP Detail		 Chr8:72022942 Cpgi20549 within coordinates of
Rr186833 within coordinates of
Rr400934 within coordinates of
Slc27a1 within coordinates of
Tssr77875 369 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs8262710
MGI SNP Detail		 Chr8:72022983 Cpgi20549 within coordinates of
Rr186833 within coordinates of
Rr400934 within coordinates of
Slc27a1 within coordinates of
Tssr77875 328 bp upstream
 SNP A/C A A A A A A A A C A A A
rs8262708
MGI SNP Detail		 Chr8:72022994 Cpgi20549 within coordinates of
Rr186833 within coordinates of
Rr400934 within coordinates of
Slc27a1 within coordinates of
Tssr77875 317 bp upstream
 SNP C/T T T C C T T T C T C C T T T T C T C T T C T C T
rs8262707
MGI SNP Detail		 Chr8:72023005 Cpgi20549 within coordinates of
Rr186833 within coordinates of
Rr400934 within coordinates of
Slc27a1 within coordinates of
Tssr77875 306 bp upstream
 SNP C/T C T T C C C T C C C C C C C C
rs228226079
MGI SNP Detail		 Chr8:72023088 Cpgi20549 within coordinates of
Rr186833 within coordinates of
Rr400934 within coordinates of
Slc27a1 within coordinates of
Tssr77875 223 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs6263295
MGI SNP Detail		 Chr8:72023132 Cpgi20549 within coordinates of
Rr186833 within coordinates of
Rr400934 within coordinates of
Slc27a1 within coordinates of
Tssr77875 179 bp upstream
 SNP G/T G G G T T G G G T G T G G G G G T G T G G T G G G
rs8262714
MGI SNP Detail		 Chr8:72023166 Cpgi20549 within coordinates of
Rr186833 within coordinates of
Rr400934 within coordinates of
Slc27a1 within coordinates of
Tssr77875 145 bp upstream
 SNP A/G A A A A A A A A A A A A G
rs8262717
MGI SNP Detail		 Chr8:72023284 Cpgi20549 within coordinates of
Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 27 bp upstream
 SNP A/C C C C C C C C C C C C C A
rs8262716
MGI SNP Detail		 Chr8:72023313 Cpgi20549 within coordinates of
Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 within coordinates of
 SNP C/T T T T T T T T T T T T T C
rs8262715
MGI SNP Detail		 Chr8:72023410 Cpgi20549 within coordinates of
Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 41 bp downstream
Tssr77876 within coordinates of
 SNP C/T C C C C C C C C C C C T C
rs8262719
MGI SNP Detail		 Chr8:72023584 Cpgi20549 within coordinates of
Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 215 bp downstream
 SNP C/T C C C C C T C
rs213786749
MGI SNP Detail		 Chr8:72023614 Cpgi20549 within coordinates of
Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 245 bp downstream
 SNP A/C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T C T
rs8262718
MGI SNP Detail		 Chr8:72023618 Cpgi20549 within coordinates of
Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 249 bp downstream
 SNP A/G A A A G G G A G A G G A A A G G G A G G A G G
rs245206484
MGI SNP Detail		 Chr8:72023705 Cpgi20549 within coordinates of
Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 336 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33575650
MGI SNP Detail		 Chr8:72023711 Cpgi20549 within coordinates of
Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 342 bp downstream
 SNP C/T T T C C T T T
rs33472840
MGI SNP Detail		 Chr8:72023782 Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 413 bp downstream
 SNP A/G G G A G G A G A G G G G A A A G G
rs32687587
MGI SNP Detail		 Chr8:72023798 Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 429 bp downstream
 SNP C/T C C T C C T C T C C C T T T C C
rs220259215
MGI SNP Detail		 Chr8:72023805 Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 436 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs33562008
MGI SNP Detail		 Chr8:72023836 Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 467 bp downstream
 SNP A/G A A G G A A A
rs256475064
MGI SNP Detail		 Chr8:72023960 Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 591 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs222162330
MGI SNP Detail		 Chr8:72023968 Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 599 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239795067
MGI SNP Detail		 Chr8:72024054 Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 685 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs252966838
MGI SNP Detail		 Chr8:72024083 Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 714 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222214728
MGI SNP Detail		 Chr8:72024257 Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 888 bp downstream
 SNP C/T C C T C T C C T C C C T T T T T T C T C C T C C C C T C C C C C T T T C C C C T C C C C C C C C C C C
rs579163683
MGI SNP Detail		 Chr8:72024290 Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 921 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs32544059
MGI SNP Detail		 Chr8:72024332 Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 963 bp downstream
 SNP C/T T C C T T T
rs242395418
MGI SNP Detail		 Chr8:72024508 Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 1139 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs228035010
MGI SNP Detail		 Chr8:72024525 Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 1156 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs244718044
MGI SNP Detail		 Chr8:72024558 Rr186833 within coordinates of
Slc27a1 within coordinates of
Tssr77875 1189 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262260004
MGI SNP Detail		 Chr8:72024809 Rr177567 within coordinates of
Slc27a1 within coordinates of
Tssr77875 1440 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs230729128
MGI SNP Detail		 Chr8:72024811 Rr177567 within coordinates of
Slc27a1 within coordinates of
Tssr77875 1442 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs585075677
MGI SNP Detail		 Chr8:72024849 Rr177567 within coordinates of
Slc27a1 within coordinates of
Tssr77875 1480 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244970648
MGI SNP Detail		 Chr8:72024855 Rr177567 within coordinates of
Slc27a1 within coordinates of
Tssr77875 1486 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215651753
MGI SNP Detail		 Chr8:72024885 Rr177567 within coordinates of
Slc27a1 within coordinates of
Tssr77875 1516 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs228349718
MGI SNP Detail		 Chr8:72024911 Rr177567 within coordinates of
Slc27a1 within coordinates of
Tssr77875 1542 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247436823
MGI SNP Detail		 Chr8:72024962 Rr177567 within coordinates of
Slc27a1 within coordinates of
Tssr77875 1593 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33262164
MGI SNP Detail		 Chr8:72024999 Rr177567 within coordinates of
Slc27a1 within coordinates of
Tssr77875 1630 bp downstream
 SNP C/T C C T C C T C T C C C C C T C C C
rs235361356
MGI SNP Detail		 Chr8:72025025 Slc27a1 within coordinates of
Tssr77875 1656 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs261636708
MGI SNP Detail		 Chr8:72025149 Slc27a1 within coordinates of
Tssr77875 1780 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs33465076
MGI SNP Detail		 Chr8:72025186 Slc27a1 within coordinates of
Tssr77875 1817 bp downstream
 SNP A/T T A T T T
rs233122375
MGI SNP Detail		 Chr8:72025208 Slc27a1 within coordinates of
Tssr77875 1839 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32735819
MGI SNP Detail		 Chr8:72025228 Slc27a1 within coordinates of
Tssr77875 1859 bp downstream
 SNP A/T A T T A A A
rs221974287
MGI SNP Detail		 Chr8:72025274 Slc27a1 within coordinates of
Tssr77875 1905 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242333012
MGI SNP Detail		 Chr8:72025303 Slc27a1 within coordinates of
Tssr77875 1934 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 71 of 71
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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