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Mouse SNP Summary
Symbol
Name
ID 		Tssr78280
transcription start site region 78280
MGI:6006047

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Showing SNP(s) 1 - 49 of 49

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs50973983
MGI SNP Detail		 Chr8:84391411 Tssr78280 1925 bp upstream
 SNP C/T T T T T C
rs37230850
MGI SNP Detail		 Chr8:84391457 Tssr78280 1879 bp upstream
 SNP A/G A A A A G A A G G
rs262275172
MGI SNP Detail		 Chr8:84391518 Rr666278 within coordinates of
Tssr78280 1818 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T C T T T T T T T T T T T T T T T T T T T
rs231027855
MGI SNP Detail		 Chr8:84391544 Rr666278 within coordinates of
Tssr78280 1792 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48433194
MGI SNP Detail		 Chr8:84391557 Rr666278 within coordinates of
Tssr78280 1779 bp upstream
 SNP C/T T T T C
rs254590507
MGI SNP Detail		 Chr8:84391558 Rr666278 within coordinates of
Tssr78280 1778 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228335683
MGI SNP Detail		 Chr8:84391598 Rr666278 within coordinates of
Tssr78280 1738 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G A G G G G G G G G G G G G
rs247436894
MGI SNP Detail		 Chr8:84391753 Rr666278 within coordinates of
Tssr78280 1583 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs216202075
MGI SNP Detail		 Chr8:84391781 Rr666278 within coordinates of
Tssr78280 1555 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs232460336
MGI SNP Detail		 Chr8:84391815 Rr666278 within coordinates of
Tssr78280 1521 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs255463527
MGI SNP Detail		 Chr8:84391848 Tssr78280 1488 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs8253617
MGI SNP Detail		 Chr8:84392327 Tssr78280 1009 bp upstream
 SNP A/G G G G G G G A G G A G G G G A G A A
rs236571609
MGI SNP Detail		 Chr8:84392337 Tssr78280 999 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs8253616
MGI SNP Detail		 Chr8:84392362 Tssr78280 974 bp upstream
 SNP A/G A G
rs8253615
MGI SNP Detail		 Chr8:84392412 Tssr78280 924 bp upstream
 SNP A/C A C C
rs582887288
MGI SNP Detail		 Chr8:84392508 Tssr78280 828 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250679391
MGI SNP Detail		 Chr8:84392542 Tssr78280 794 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs8253614
MGI SNP Detail		 Chr8:84392704 Tssr78280 632 bp upstream
 SNP C/T T T T T T T T T T T C
rs8253613
MGI SNP Detail		 Chr8:84392710 Tssr78280 626 bp upstream
 SNP C/T C C C C C C C C C C C T
rs8253612
MGI SNP Detail		 Chr8:84392779 Tssr78280 557 bp upstream
 SNP A/C A A A A A C A A
rs216946441
MGI SNP Detail		 Chr8:84392797 Tssr78280 539 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T G G T T T T T G G T T T G T T T T T T
rs8236747
MGI SNP Detail		 Chr8:84392805 Tssr78280 531 bp upstream
 SNP C/T T T T T T T T T T T T T T T C
rs8254488
MGI SNP Detail		 Chr8:84392831 Rr666279 within coordinates of
Tssr78280 505 bp upstream
 SNP C/T T T T T T C T T T T C C T C T T C T C C T T C C C T
rs8254487
MGI SNP Detail		 Chr8:84392860 Rr666279 within coordinates of
Tssr78280 476 bp upstream
 SNP C/G C C C C G C C C G C C C G G G
rs246022166
MGI SNP Detail		 Chr8:84392881 Rr666279 within coordinates of
Tssr78280 455 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs8253630
MGI SNP Detail		 Chr8:84392966 Rr666279 within coordinates of
Tssr78280 370 bp upstream
 SNP A/G G G G G G G G G G G G G A
rs8253629
MGI SNP Detail		 Chr8:84392980 Rr666279 within coordinates of
Tssr78280 356 bp upstream
 SNP A/G G G G G G G G G G G G G A
rs8253628
MGI SNP Detail		 Chr8:84393038 Rr666279 within coordinates of
Tssr78280 298 bp upstream
 SNP G/T G G G G G G G G G G G G T
rs8253627
MGI SNP Detail		 Chr8:84393047 Rr666279 within coordinates of
Tssr78280 289 bp upstream
 SNP A/G A A A A A A A A A A A G
rs8253610
MGI SNP Detail		 Chr8:84393282 Pkn1 within coordinates of
Rr666279 within coordinates of
Tssr78279 within coordinates of
Tssr78280 54 bp upstream
 SNP C/T C C C C C C C C C C T
rs3697479
MGI SNP Detail		 Chr8:84393369 Pkn1 within coordinates of
Ptger1 within coordinates of
Rr666280 within coordinates of
Tssr78280 23 bp downstream
 SNP A/G A A A A A G G A A A G
rs263186655
MGI SNP Detail		 Chr8:84393618 Pkn1 within coordinates of
Ptger1 within coordinates of
Rr666280 within coordinates of
Tssr78280 272 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs8238231
MGI SNP Detail		 Chr8:84393649 Pkn1 within coordinates of
Ptger1 within coordinates of
Rr666280 within coordinates of
Tssr78280 303 bp downstream
 SNP A/G A A A A A A A G
rs233165454
MGI SNP Detail		 Chr8:84393678 Pkn1 within coordinates of
Ptger1 within coordinates of
Rr666280 within coordinates of
Tssr78280 332 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs36448246
MGI SNP Detail		 Chr8:84393716 Pkn1 within coordinates of
Ptger1 within coordinates of
Rr666280 within coordinates of
Tssr78280 370 bp downstream
 SNP A/G G G G G G G G G G G A G G G G
rs13473235
MGI SNP Detail		 Chr8:84393729 Pkn1 within coordinates of
Ptger1 within coordinates of
Rr666280 within coordinates of
Tssr78280 383 bp downstream
 SNP C/T T T T T T T T C C T C T T C T T C C T
rs13473236
MGI SNP Detail		 Chr8:84393751 Pkn1 within coordinates of
Ptger1 within coordinates of
Rr666280 within coordinates of
Tssr78280 405 bp downstream
 SNP C/T C C C C C C C T T C T C C T C C T T C
rs8238230
MGI SNP Detail		 Chr8:84393827 Pkn1 within coordinates of
Ptger1 within coordinates of
Rr666280 within coordinates of
Tssr78280 481 bp downstream
 SNP A/G A A A A A A G
rs8236748
MGI SNP Detail		 Chr8:84393967 Pkn1 within coordinates of
Ptger1 within coordinates of
Rr666280 within coordinates of
Tssr78280 621 bp downstream
 SNP C/T T T T T T T T T T T T T T T C
rs38949938
MGI SNP Detail		 Chr8:84393968 Pkn1 within coordinates of
Ptger1 within coordinates of
Rr666280 within coordinates of
Tssr78280 622 bp downstream
 SNP A/T T T T T T T T T T T A T T T T
rs37450579
MGI SNP Detail		 Chr8:84394164 Pkn1 within coordinates of
Ptger1 within coordinates of
Tssr78280 818 bp downstream
 SNP A/G A A A A G A A A A
rs8254486
MGI SNP Detail		 Chr8:84394166 Pkn1 within coordinates of
Ptger1 within coordinates of
Tssr78280 820 bp downstream
 SNP A/G A A A A A A G A A A A G G A G A A G A G A A G G G
rs8236750
MGI SNP Detail		 Chr8:84394187 Pkn1 within coordinates of
Ptger1 within coordinates of
Tssr78280 841 bp downstream
 SNP A/G G G G G G G G G G G G G G A
rs8253606
MGI SNP Detail		 Chr8:84394325 Pkn1 within coordinates of
Ptger1 within coordinates of
Tssr78280 979 bp downstream
 SNP C/T C C C C C C C C C C C C T
rs8253607
MGI SNP Detail		 Chr8:84394344 Cpgi20651 within coordinates of
Pkn1 within coordinates of
Ptger1 within coordinates of
Tssr78280 998 bp downstream
 SNP A/G G G G G G G G G G G G G A
rs8236751
MGI SNP Detail		 Chr8:84394503 Cpgi20651 within coordinates of
Pkn1 within coordinates of
Ptger1 within coordinates of
Rr666281 within coordinates of
Tssr78280 1157 bp downstream
 SNP C/T C C C C C C C C C C T C C C C C C C C
rs8238229
MGI SNP Detail		 Chr8:84394618 Cpgi20651 within coordinates of
Pkn1 within coordinates of
Ptger1 within coordinates of
Tssr78280 1272 bp downstream
 SNP C/T C C C C C C C C T C C C C C C C C C
rs8253623
MGI SNP Detail		 Chr8:84394650 Cpgi20651 within coordinates of
Pkn1 within coordinates of
Ptger1 within coordinates of
Tssr78280 1304 bp downstream
 SNP A/G A G G A
rs8253622
MGI SNP Detail		 Chr8:84395260 Cpgi20651 within coordinates of
Pkn1 within coordinates of
Ptger1 within coordinates of
Tssr78280 1914 bp downstream
 SNP C/T T T T T T T T T T C
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Showing SNP(s) 1 - 49 of 49
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory