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Mouse SNP Summary
Symbol
Name
ID 		Tssr78573
transcription start site region 78573
MGI:6006340

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261627891
MGI SNP Detail		 Chr8:87470166 Gm63869 within coordinates of
Siah1a within coordinates of
Tssr78573 1962 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229275775
MGI SNP Detail		 Chr8:87470224 Gm63869 within coordinates of
Siah1a within coordinates of
Tssr78573 1904 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240901099
MGI SNP Detail		 Chr8:87470327 Gm63869 within coordinates of
Siah1a within coordinates of
Tssr78573 1801 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs37263194
MGI SNP Detail		 Chr8:87470426 Gm63869 within coordinates of
Siah1a within coordinates of
Tssr78573 1702 bp upstream
 SNP C/T C C C C C C T C T T
rs229199825
MGI SNP Detail		 Chr8:87470477 Gm63869 within coordinates of
Siah1a within coordinates of
Tssr78573 1651 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs580993313
MGI SNP Detail		 Chr8:87470547 Gm63869 within coordinates of
Siah1a within coordinates of
Tssr78573 1581 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs245255480
MGI SNP Detail		 Chr8:87470608 Gm63869 within coordinates of
Siah1a within coordinates of
Tssr78573 1520 bp upstream
 SNP A/G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G A G G G G
rs216976995
MGI SNP Detail		 Chr8:87470705 Gm63869 within coordinates of
Siah1a within coordinates of
Tssr78573 1423 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs584752604
MGI SNP Detail		 Chr8:87470775 Gm63869 within coordinates of
Siah1a within coordinates of
Tssr78573 1353 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229755205
MGI SNP Detail		 Chr8:87470786 Gm63869 within coordinates of
Siah1a within coordinates of
Tssr78573 1342 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A
rs255947369
MGI SNP Detail		 Chr8:87470804 Gm63869 within coordinates of
Siah1a within coordinates of
Tssr78573 1324 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs211830586
MGI SNP Detail		 Chr8:87470813 Gm63869 within coordinates of
Siah1a within coordinates of
Tssr78573 1315 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs230436072
MGI SNP Detail		 Chr8:87470869 Gm63869 within coordinates of
Siah1a within coordinates of
Tssr78573 1259 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs254022390
MGI SNP Detail		 Chr8:87470874 Gm63869 within coordinates of
Siah1a within coordinates of
Tssr78573 1254 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs217128652
MGI SNP Detail		 Chr8:87470953 Gm63869 within coordinates of
Siah1a within coordinates of
Tssr78573 1175 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs234328656
MGI SNP Detail		 Chr8:87470977 Gm63869 within coordinates of
Siah1a within coordinates of
Tssr78573 1151 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs259860959
MGI SNP Detail		 Chr8:87471092 Gm63869 within coordinates of
Rr666882 within coordinates of
Siah1a within coordinates of
Tssr78573 1036 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs222409751
MGI SNP Detail		 Chr8:87471099 Gm63869 within coordinates of
Rr666882 within coordinates of
Siah1a within coordinates of
Tssr78573 1029 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs47982996
MGI SNP Detail		 Chr8:87471182 Gm63869 within coordinates of
Rr666882 within coordinates of
Siah1a within coordinates of
Tssr78573 946 bp upstream
 SNP A/G A A G
rs261147560
MGI SNP Detail		 Chr8:87471284 Gm63869 within coordinates of
Rr666882 within coordinates of
Siah1a within coordinates of
Tssr78573 844 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs221817629
MGI SNP Detail		 Chr8:87471356 Gm63869 within coordinates of
Rr666882 within coordinates of
Siah1a within coordinates of
Tssr78573 772 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241025477
MGI SNP Detail		 Chr8:87471376 Gm63869 within coordinates of
Rr666882 within coordinates of
Siah1a within coordinates of
Tssr78573 752 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259931943
MGI SNP Detail		 Chr8:87471539 Gm63869 within coordinates of
Rr666882 within coordinates of
Siah1a within coordinates of
Tssr78573 589 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs220841851
MGI SNP Detail		 Chr8:87471565 Gm63869 within coordinates of
Rr666882 within coordinates of
Siah1a within coordinates of
Tssr78573 563 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs239155057
MGI SNP Detail		 Chr8:87471626 Gm63869 within coordinates of
Rr666882 within coordinates of
Siah1a within coordinates of
Tssr78573 502 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263563584
MGI SNP Detail		 Chr8:87471705 Cpgi20765 within coordinates of
Gm63869 within coordinates of
Rr666882 within coordinates of
Siah1a within coordinates of
Tssr78573 423 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C T C
rs230223018
MGI SNP Detail		 Chr8:87471811 Cpgi20765 within coordinates of
Gm63869 within coordinates of
Rr666882 within coordinates of
Siah1a within coordinates of
Tssr78573 317 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251388609
MGI SNP Detail		 Chr8:87471897 Cpgi20765 within coordinates of
Gm63869 within coordinates of
Rr666882 within coordinates of
Siah1a within coordinates of
Tssr78573 231 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264620766
MGI SNP Detail		 Chr8:87471907 Cpgi20765 within coordinates of
Gm63869 within coordinates of
Rr666882 within coordinates of
Siah1a within coordinates of
Tssr78573 221 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224749527
MGI SNP Detail		 Chr8:87471951 Cpgi20765 within coordinates of
Gm63869 within coordinates of
Rr666882 within coordinates of
Siah1a within coordinates of
Tssr78573 177 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs247802781
MGI SNP Detail		 Chr8:87472137 Cpgi20765 within coordinates of
Rr666884 within coordinates of
Siah1a within coordinates of
Tssr78573 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217073391
MGI SNP Detail		 Chr8:87472153 Cpgi20765 within coordinates of
Rr666884 within coordinates of
Siah1a within coordinates of
Tssr78573 10 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs233468508
MGI SNP Detail		 Chr8:87472222 Cpgi20765 within coordinates of
Rr666884 within coordinates of
Siah1a within coordinates of
Tssr78573 79 bp downstream
Tssr78575 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258682890
MGI SNP Detail		 Chr8:87472404 Cpgi20765 within coordinates of
Gm10638 within coordinates of
Rr666884 within coordinates of
Siah1a within coordinates of
Tssr78573 261 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs578934420
MGI SNP Detail		 Chr8:87472526 Cpgi20765 within coordinates of
Gm10638 within coordinates of
Rr666884 within coordinates of
Siah1a within coordinates of
Tssr78573 383 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs581537322
MGI SNP Detail		 Chr8:87472538 Cpgi20765 within coordinates of
Gm10638 within coordinates of
Rr666884 within coordinates of
Siah1a within coordinates of
Tssr78573 395 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C T
rs214253662
MGI SNP Detail		 Chr8:87472649 Cpgi20765 within coordinates of
Gm10638 within coordinates of
Rr666885 within coordinates of
Tssr78573 506 bp downstream
Tssr82293 within coordinates of
 SNP C/T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs239503145
MGI SNP Detail		 Chr8:87472722 Cpgi20765 within coordinates of
Gm10638 within coordinates of
Rr666885 within coordinates of
Tssr78573 579 bp downstream
Tssr82294 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs255739837
MGI SNP Detail		 Chr8:87472741 Cpgi20765 within coordinates of
Gm10638 within coordinates of
Rr666885 within coordinates of
Tssr78573 598 bp downstream
Tssr82294 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A G A A A A A A A G A A A A
rs218945330
MGI SNP Detail		 Chr8:87472752 Cpgi20765 within coordinates of
Gm10638 within coordinates of
Rr666885 within coordinates of
Tssr78573 609 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs234502392
MGI SNP Detail		 Chr8:87472793 Cpgi20765 within coordinates of
Gm10638 within coordinates of
Rr666885 within coordinates of
Tssr78573 650 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs253346765
MGI SNP Detail		 Chr8:87472880 Cpgi20765 within coordinates of
Gm10638 within coordinates of
Rr666885 within coordinates of
Tssr78573 737 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs220782125
MGI SNP Detail		 Chr8:87472957 Cpgi20765 within coordinates of
Gm10638 within coordinates of
Rr666885 within coordinates of
Tssr78573 814 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C
rs246499204
MGI SNP Detail		 Chr8:87473021 Cpgi20765 within coordinates of
Gm10638 within coordinates of
Rr666885 within coordinates of
Tssr78573 878 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs265103912
MGI SNP Detail		 Chr8:87473190 Cpgi20765 within coordinates of
Gm10638 within coordinates of
Tssr78573 1047 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs222527636
MGI SNP Detail		 Chr8:87473194 Cpgi20765 within coordinates of
Gm10638 within coordinates of
Tssr78573 1051 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246883895
MGI SNP Detail		 Chr8:87473239 Cpgi20765 within coordinates of
Gm10638 within coordinates of
Tssr78573 1096 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs261377798
MGI SNP Detail		 Chr8:87473241 Cpgi20765 within coordinates of
Gm10638 within coordinates of
Tssr78573 1098 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224882275
MGI SNP Detail		 Chr8:87473327 Cpgi20765 within coordinates of
Gm10638 within coordinates of
Tssr78573 1184 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs6215099
MGI SNP Detail		 Chr8:87473328 Cpgi20765 within coordinates of
Gm10638 within coordinates of
Tssr78573 1185 bp downstream
 SNP G/T G T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261102756
MGI SNP Detail		 Chr8:87473364 Cpgi20765 within coordinates of
Gm10638 within coordinates of
Tssr78573 1221 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227169769
MGI SNP Detail		 Chr8:87473373 Cpgi20765 within coordinates of
Gm10638 within coordinates of
Tssr78573 1230 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252805679
MGI SNP Detail		 Chr8:87473521 Gm10638 within coordinates of
Tssr78573 1378 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs6216224
MGI SNP Detail		 Chr8:87473527 Gm10638 within coordinates of
Tssr78573 1384 bp downstream
 SNP C/T T C
rs237392753
MGI SNP Detail		 Chr8:87473628 Gm10638 within coordinates of
Tssr78573 1485 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253422241
MGI SNP Detail		 Chr8:87473629 Gm10638 within coordinates of
Tssr78573 1486 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585198625
MGI SNP Detail		 Chr8:87473689 Tssr78573 1546 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213118997
MGI SNP Detail		 Chr8:87473700 Tssr78573 1557 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A C A A A A A A A A A A C A A A A A A A A A A A A A A C A A A A A A C A
rs234651994
MGI SNP Detail		 Chr8:87473726 Tssr78573 1583 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs13479880
MGI SNP Detail		 Chr8:87473757 Tssr78573 1614 bp downstream
 SNP A/C C C A C C C C A A A A A A C C A A C A A C A A C A C C C A C C A C A A A C C C C C A A C A C C C
rs215355801
MGI SNP Detail		 Chr8:87473803 Tssr78573 1660 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A C A A A A A A A A A A C A A A A A A A A A A A A A A C A A A A A A C A
rs241342893
MGI SNP Detail		 Chr8:87473904 Tssr78573 1761 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs257138804
MGI SNP Detail		 Chr8:87473959 Tssr78573 1816 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
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Showing SNP(s) 1 - 63 of 63
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory