About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Tssr78793
transcription start site region 78793
MGI:6006560

<< first < prev1 next > last >>
Showing SNP(s) 1 - 44 of 44

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237600059
MGI SNP Detail
Chr8:94535206 Tssr78793 1994 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252125327
MGI SNP Detail
Chr8:94535229 Tssr78793 1971 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs584671921
MGI SNP Detail
Chr8:94535324 Tssr78793 1876 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs222602640
MGI SNP Detail
Chr8:94535352 Tssr78793 1848 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G A G G G G G G A G G G G G G G G G G G G
rs32612408
MGI SNP Detail
Chr8:94535405 Tssr78793 1795 bp upstream
SNP A/T T A A A
rs263264711
MGI SNP Detail
Chr8:94535465 Tssr78793 1735 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs232020983
MGI SNP Detail
Chr8:94535495 Tssr78793 1705 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578819256
MGI SNP Detail
Chr8:94535589 Tssr78793 1611 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs241419459
MGI SNP Detail
Chr8:94535678 Tssr78793 1522 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G G A G G G G G G A G G G G G G G A G G G G
rs258812522
MGI SNP Detail
Chr8:94535821 Tssr78793 1379 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224354744
MGI SNP Detail
Chr8:94535893 Tssr78793 1307 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T C T T T T T T C T T T T T T T C T T T T
rs242253159
MGI SNP Detail
Chr8:94536029 Tssr78793 1171 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C T C C C C C C T C C C C C C C C C C C C
rs214132082
MGI SNP Detail
Chr8:94536050 Tssr78793 1150 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A A A A A A A C A A A A A A C A A A A A A A C A A A A
rs229430552
MGI SNP Detail
Chr8:94536172 Tssr78793 1028 bp upstream
SNP A/G A A A G A G G G G A G G G G G G G G G G G G G G G G G G G G G A A G G G G G G A G G G G G G A G G G G A G
rs258002433
MGI SNP Detail
Chr8:94536214 Tssr78793 986 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A T A A A A A A T A A A A A A A A A A A A
rs215387477
MGI SNP Detail
Chr8:94536316 Tssr78793 884 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs242749677
MGI SNP Detail
Chr8:94536437 Cpgi20831 within coordinates of
Rr187112 within coordinates of
Tssr78793 763 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T A T T T T T T A T T T T T T T T T T T T
rs254723478
MGI SNP Detail
Chr8:94536468 Cpgi20831 within coordinates of
Rr187112 within coordinates of
Tssr78793 732 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs6202180
MGI SNP Detail
Chr8:94536476 Cpgi20831 within coordinates of
Rr187112 within coordinates of
Tssr78793 724 bp upstream
SNP A/G G A
rs6202671
MGI SNP Detail
Chr8:94536524 Cpgi20831 within coordinates of
Rr187112 within coordinates of
Tssr78793 676 bp upstream
SNP A/G G A
rs252409307
MGI SNP Detail
Chr8:94536550 Cpgi20831 within coordinates of
Rr187112 within coordinates of
Tssr78793 650 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs6203172
MGI SNP Detail
Chr8:94536583 Cpgi20831 within coordinates of
Rr187112 within coordinates of
Tssr78793 617 bp upstream
SNP G/T T G
rs6203302
MGI SNP Detail
Chr8:94536664 Cpgi20831 within coordinates of
Rr187112 within coordinates of
Tssr78793 536 bp upstream
SNP A/C A C
rs6203778
MGI SNP Detail
Chr8:94536719 Cpgi20831 within coordinates of
Rr187112 within coordinates of
Tssr78793 481 bp upstream
SNP A/G A G
rs226947401
MGI SNP Detail
Chr8:94536810 Cpgi20831 within coordinates of
Rr187112 within coordinates of
Tssr78793 390 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs240969838
MGI SNP Detail
Chr8:94536951 Cpgi20831 within coordinates of
Rr187112 within coordinates of
Tssr78793 249 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs581950256
MGI SNP Detail
Chr8:94536952 Cpgi20831 within coordinates of
Rr187112 within coordinates of
Tssr78793 248 bp upstream
SNP C/G G G G G G G G G G G G G G G C G G G G G G G G G C G G G G G G G G
rs258858582
MGI SNP Detail
Chr8:94537022 Cpgi20831 within coordinates of
Rr187112 within coordinates of
Tssr78793 178 bp upstream
SNP G/T G T G T T T T T T T T G T G T T T G G G T T G G G T T G G G G
rs579203663
MGI SNP Detail
Chr8:94537039 Cpgi20831 within coordinates of
Rr187112 within coordinates of
Tssr78793 161 bp upstream
SNP A/G G G G G G G G G G G G G G G A G G G G G G G G G A G G G G G G G
rs582819165
MGI SNP Detail
Chr8:94537040 Cpgi20831 within coordinates of
Rr187112 within coordinates of
Tssr78793 160 bp upstream
SNP C/T C C C C C C C C C C C T C C T C C C C C C C C C T C C C C C C C
rs585616182
MGI SNP Detail
Chr8:94537071 Cpgi20831 within coordinates of
Rr187112 within coordinates of
Tssr78793 129 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G
rs580136863
MGI SNP Detail
Chr8:94537079 Cpgi20831 within coordinates of
Rr187112 within coordinates of
Tssr78793 121 bp upstream
SNP C/G C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C
rs224169265
MGI SNP Detail
Chr8:94537392 Cpgi20831 within coordinates of
Gnao1 within coordinates of
Rr187112 within coordinates of
Tssr78793 113 bp downstream
SNP C/T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs235875239
MGI SNP Detail
Chr8:94537712 Cpgi20831 within coordinates of
Gnao1 within coordinates of
Rr187112 within coordinates of
Tssr78793 433 bp downstream
Tssr78802 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262757055
MGI SNP Detail
Chr8:94537862 Cpgi20831 within coordinates of
Gnao1 within coordinates of
Rr187112 within coordinates of
Tssr78793 583 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C T C C C C C C T C C C C C C C C C C C C
rs229841640
MGI SNP Detail
Chr8:94538092 Cpgi20831 within coordinates of
Gnao1 within coordinates of
Rr187112 within coordinates of
Tssr78793 813 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G G G G G G C G G G G G G C G G G G G G G C G G G G
rs252827981
MGI SNP Detail
Chr8:94538132 Cpgi20831 within coordinates of
Gnao1 within coordinates of
Rr187112 within coordinates of
Tssr78793 853 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs215724383
MGI SNP Detail
Chr8:94538153 Cpgi20831 within coordinates of
Gnao1 within coordinates of
Rr187112 within coordinates of
Tssr78793 874 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229031539
MGI SNP Detail
Chr8:94538201 Gnao1 within coordinates of
Rr187112 within coordinates of
Tssr78793 922 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T C C T T T T T C C T T T T T T C T C T C
rs247742894
MGI SNP Detail
Chr8:94538642 4930488L21Rik within coordinates of
Gnao1 within coordinates of
Rr187112 within coordinates of
Tssr78793 1363 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs213207136
MGI SNP Detail
Chr8:94538911 4930488L21Rik within coordinates of
Gnao1 within coordinates of
Rr187112 within coordinates of
Tssr78793 1632 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A G A A A A A A A G A G
rs230120062
MGI SNP Detail
Chr8:94539168 4930488L21Rik within coordinates of
Gnao1 within coordinates of
Rr187112 within coordinates of
Tssr78793 1889 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C A C C C C C C A C C C C C C C C C C C C
rs252442018
MGI SNP Detail
Chr8:94539253 4930488L21Rik within coordinates of
Gnao1 within coordinates of
Rr187112 within coordinates of
Tssr78793 1974 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T T T T T T T A A T T T T T A A T T T T T A T A T
rs214240707
MGI SNP Detail
Chr8:94539273 4930488L21Rik within coordinates of
Gnao1 within coordinates of
Rr187112 within coordinates of
Tssr78793 1994 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
<< first < prev1 next > last >>
Showing SNP(s) 1 - 44 of 44

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
12/17/2024
MGI 6.24
The Jackson Laboratory