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Mouse SNP Summary
Symbol
Name
ID 		Tssr79173
transcription start site region 79173
MGI:6006940

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Showing SNP(s) 1 - 46 of 46

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs215482280
MGI SNP Detail		 Chr8:106361626 Gm5914 within coordinates of
Tssr79173 1932 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs228188527
MGI SNP Detail		 Chr8:106361667 Gm5914 within coordinates of
Tssr79173 1891 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254120216
MGI SNP Detail		 Chr8:106361733 Gm5914 within coordinates of
Tssr79173 1825 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T C T T T T T T C T T T T T T T T T T T T
rs219161961
MGI SNP Detail		 Chr8:106361815 Gm5914 within coordinates of
Rr185893 within coordinates of
Tssr79173 1743 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234766543
MGI SNP Detail		 Chr8:106361882 Gm5914 within coordinates of
Rr185893 within coordinates of
Tssr79173 1676 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C A C C C C C C A C C C C C C C C C C C C
rs261505514
MGI SNP Detail		 Chr8:106362056 Gm5914 within coordinates of
Rr185893 within coordinates of
Tssr79173 1502 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213629775
MGI SNP Detail		 Chr8:106362100 Gm5914 within coordinates of
Rr185893 within coordinates of
Tssr79173 1458 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs232147357
MGI SNP Detail		 Chr8:106362176 Gm5914 within coordinates of
Rr185893 within coordinates of
Tssr79173 1382 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A A T A A A A T A A A A A A T A A A A A A A T A A A A
rs251114377
MGI SNP Detail		 Chr8:106362248 Gm5914 within coordinates of
Rr185893 within coordinates of
Tssr79173 1310 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221372282
MGI SNP Detail		 Chr8:106362273 Gm5914 within coordinates of
Rr185893 within coordinates of
Tssr79173 1285 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249844585
MGI SNP Detail		 Chr8:106362286 Gm5914 within coordinates of
Rr185893 within coordinates of
Tssr79173 1272 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T C T T T T T T C T T T T T T T T T T T T
rs260726730
MGI SNP Detail		 Chr8:106362382 Cpgi20943 within coordinates of
Gm5914 within coordinates of
Rr185893 within coordinates of
Tssr79173 1176 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219666207
MGI SNP Detail		 Chr8:106362412 Cpgi20943 within coordinates of
Gm5914 within coordinates of
Rr185893 within coordinates of
Tssr79173 1146 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs241795344
MGI SNP Detail		 Chr8:106362434 Cpgi20943 within coordinates of
Gm5914 within coordinates of
Rr185893 within coordinates of
Tssr79169 within coordinates of
Tssr79173 1124 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257091890
MGI SNP Detail		 Chr8:106362498 Cpgi20943 within coordinates of
Gm5914 within coordinates of
Rr185893 within coordinates of
Tssr79173 1060 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226138402
MGI SNP Detail		 Chr8:106362517 Cpgi20943 within coordinates of
Gm5914 within coordinates of
Rr185893 within coordinates of
Tssr79173 1041 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240143148
MGI SNP Detail		 Chr8:106362699 Cpgi20943 within coordinates of
Gm5914 within coordinates of
Rr185893 within coordinates of
Tssr79173 859 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259369179
MGI SNP Detail		 Chr8:106362702 Cpgi20943 within coordinates of
Gm5914 within coordinates of
Rr185893 within coordinates of
Tssr79173 856 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs232663236
MGI SNP Detail		 Chr8:106362906 Cpgi20943 within coordinates of
Gm5914 within coordinates of
Rr185893 within coordinates of
Tssr79173 652 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs259328785
MGI SNP Detail		 Chr8:106362912 Cpgi20943 within coordinates of
Gm5914 within coordinates of
Rr185893 within coordinates of
Tssr79173 646 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G A G G G G G A G G G G G G G G G G G G
rs219501972
MGI SNP Detail		 Chr8:106362932 Cpgi20943 within coordinates of
Gm5914 within coordinates of
Rr185893 within coordinates of
Tssr79173 626 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C G C C G C C C C G C C C G C C C C C G C C C C C C C G C C C
rs228208276
MGI SNP Detail		 Chr8:106363115 Cpgi20943 within coordinates of
Gm5914 within coordinates of
Rr185893 within coordinates of
Tssr79173 443 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A
rs243137201
MGI SNP Detail		 Chr8:106363520 Cpgi20943 within coordinates of
Ctcf within coordinates of
Gm5914 within coordinates of
Rr185893 within coordinates of
Tssr79173 38 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs213767580
MGI SNP Detail		 Chr8:106363752 Cpgi20943 within coordinates of
Ctcf within coordinates of
Gm5914 within coordinates of
Rr185893 within coordinates of
Tssr79173 141 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T
rs232092379
MGI SNP Detail		 Chr8:106363786 Cpgi20943 within coordinates of
Ctcf within coordinates of
Gm5914 within coordinates of
Rr185893 within coordinates of
Tssr79173 175 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C T C C C C C C T C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251237610
MGI SNP Detail		 Chr8:106363979 Cpgi20943 within coordinates of
Ctcf within coordinates of
Gm5914 within coordinates of
Rr185893 within coordinates of
Tssr79173 368 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs215773577
MGI SNP Detail		 Chr8:106364323 Cpgi20943 within coordinates of
Ctcf within coordinates of
Rr185893 within coordinates of
Tssr79173 712 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs239389310
MGI SNP Detail		 Chr8:106364340 Cpgi20943 within coordinates of
Ctcf within coordinates of
Rr185893 within coordinates of
Tssr79173 729 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264064654
MGI SNP Detail		 Chr8:106364409 Cpgi20943 within coordinates of
Ctcf within coordinates of
Rr185893 within coordinates of
Tssr79173 798 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G A G G G G G G A G G G G G G G G G G G G
rs220111921
MGI SNP Detail		 Chr8:106364476 Cpgi20943 within coordinates of
Ctcf within coordinates of
Rr185893 within coordinates of
Tssr79173 865 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244806006
MGI SNP Detail		 Chr8:106364691 Ctcf within coordinates of
Rr185893 within coordinates of
Tssr79173 1080 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250914543
MGI SNP Detail		 Chr8:106364735 Ctcf within coordinates of
Rr185893 within coordinates of
Tssr79173 1124 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219996875
MGI SNP Detail		 Chr8:106364796 Ctcf within coordinates of
Rr185893 within coordinates of
Tssr79173 1185 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240078588
MGI SNP Detail		 Chr8:106364826 Ctcf within coordinates of
Rr185893 within coordinates of
Tssr79173 1215 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs259502655
MGI SNP Detail		 Chr8:106364840 Ctcf within coordinates of
Rr185893 within coordinates of
Tssr79173 1229 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233405577
MGI SNP Detail		 Chr8:106364972 Ctcf within coordinates of
Rr185893 within coordinates of
Tssr79173 1361 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247815828
MGI SNP Detail		 Chr8:106364973 Ctcf within coordinates of
Rr185893 within coordinates of
Tssr79173 1362 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs266226779
MGI SNP Detail		 Chr8:106364974 Ctcf within coordinates of
Rr185893 within coordinates of
Tssr79173 1363 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs227887942
MGI SNP Detail		 Chr8:106364993 Ctcf within coordinates of
Rr185893 within coordinates of
Tssr79173 1382 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs243262870
MGI SNP Detail		 Chr8:106365006 Ctcf within coordinates of
Rr185893 within coordinates of
Tssr79173 1395 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs255476730
MGI SNP Detail		 Chr8:106365242 Ctcf within coordinates of
Rr185893 within coordinates of
Tssr79173 1631 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A G A A A A A A G A A A A A A A G A A A A
rs226173135
MGI SNP Detail		 Chr8:106365295 Ctcf within coordinates of
Rr185893 within coordinates of
Tssr79173 1684 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245219510
MGI SNP Detail		 Chr8:106365315 Ctcf within coordinates of
Rr185893 within coordinates of
Tssr79173 1704 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216656705
MGI SNP Detail		 Chr8:106365350 Ctcf within coordinates of
Rr185893 within coordinates of
Tssr79173 1739 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs241885983
MGI SNP Detail		 Chr8:106365429 Ctcf within coordinates of
Rr185893 within coordinates of
Tssr79173 1818 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30920916
MGI SNP Detail		 Chr8:106365581 Ctcf within coordinates of
Rr185893 within coordinates of
Tssr79173 1970 bp downstream
 SNP A/G G G G G G G A G G
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Showing SNP(s) 1 - 46 of 46
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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