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Mouse SNP Summary
Symbol
Name
ID
Tssr79361
transcription start site region 79361
MGI:6007128

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221192395
MGI SNP Detail
Chr8:110338865 Gm64800 within coordinates of
Tssr79361 1995 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T T T T T T T A T T T T T T A T T T T T T T A T T T T
rs244375590
MGI SNP Detail
Chr8:110338915 Gm64800 within coordinates of
Tssr79361 1945 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255477820
MGI SNP Detail
Chr8:110338969 Gm64800 within coordinates of
Tssr79361 1891 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs579099498
MGI SNP Detail
Chr8:110339067 Gm64800 within coordinates of
Tssr79361 1793 bp upstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs582596066
MGI SNP Detail
Chr8:110339069 Gm64800 within coordinates of
Tssr79361 1791 bp upstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs585940733
MGI SNP Detail
Chr8:110339073 Gm64800 within coordinates of
Tssr79361 1787 bp upstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs579901264
MGI SNP Detail
Chr8:110339075 Gm64800 within coordinates of
Tssr79361 1785 bp upstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs583099038
MGI SNP Detail
Chr8:110339077 Gm64800 within coordinates of
Tssr79361 1783 bp upstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs585543115
MGI SNP Detail
Chr8:110339093 Gm64800 within coordinates of
Tssr79361 1767 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs223086879
MGI SNP Detail
Chr8:110339234 Gm64800 within coordinates of
Tssr79361 1626 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C C C C C C C A C C C C C C A C C C C C C C A C C C C
rs241569325
MGI SNP Detail
Chr8:110339236 Gm64800 within coordinates of
Tssr79361 1624 bp upstream
SNP C/G/T T T T T T T T T T T T T T T T T T T T C T T G T T T T T T T T T T G T T T T T T G T T T T T T T C T T T T
rs579463282
MGI SNP Detail
Chr8:110339279 Gm64800 within coordinates of
Tssr79361 1581 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C C C C C C C A C C C C C C A C C C C C C C C C C C C
rs584081722
MGI SNP Detail
Chr8:110339281 Gm64800 within coordinates of
Tssr79361 1579 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G G G G G G G T G G G G G G G G G G G G G G G G G G
rs259476922
MGI SNP Detail
Chr8:110339350 Gm64800 within coordinates of
Tssr79361 1510 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231293783
MGI SNP Detail
Chr8:110339356 Gm64800 within coordinates of
Tssr79361 1504 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C C C C C C C A C C C C C C A C C C C C C C A C C C C
rs243229524
MGI SNP Detail
Chr8:110339462 Gm64800 within coordinates of
Tssr79361 1398 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T T T T T T T A T T T T T T A T T T T T T T A T T T T
rs264917878
MGI SNP Detail
Chr8:110339477 Gm64800 within coordinates of
Tssr79361 1383 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T C T T T T T T C T T T T T T T C T T T T
rs227818173
MGI SNP Detail
Chr8:110339529 Gm64800 within coordinates of
Tssr79361 1331 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C T C C C C C C T C C C C C C C T C C C C
rs242200908
MGI SNP Detail
Chr8:110339559 Gm64800 within coordinates of
Tssr79361 1301 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs217212924
MGI SNP Detail
Chr8:110339748 Gm64800 within coordinates of
Tssr79361 1112 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs31182288
MGI SNP Detail
Chr8:110339749 Gm64800 within coordinates of
Tssr79361 1111 bp upstream
SNP A/G A A A A G A A A G A A G
rs245989760
MGI SNP Detail
Chr8:110339922 Gm64800 within coordinates of
Tssr79361 938 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T C T T T T T T C T T T T T T T C T T T T
rs215679183
MGI SNP Detail
Chr8:110340027 Gm64800 within coordinates of
Tssr79361 833 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238739456
MGI SNP Detail
Chr8:110340064 Gm64800 within coordinates of
Tssr79361 796 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256724494
MGI SNP Detail
Chr8:110340134 Gm64800 within coordinates of
Tssr79361 726 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212985361
MGI SNP Detail
Chr8:110340175 Gm64800 within coordinates of
Tssr79361 685 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C T C C C C C C T C C C C C C C C C C C C
rs587535118
MGI SNP Detail
Chr8:110340179 Gm64800 within coordinates of
Tssr79361 681 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs229729806
MGI SNP Detail
Chr8:110340208 Gm64800 within coordinates of
Tssr79361 652 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T C T T T T T T C T T T T T T T T T T T T
rs255535110
MGI SNP Detail
Chr8:110340303 Gm64800 within coordinates of
Tssr79361 557 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223001485
MGI SNP Detail
Chr8:110340327 Gm64800 within coordinates of
Tssr79361 533 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33119996
MGI SNP Detail
Chr8:110340400 Gm64800 within coordinates of
Tssr79361 460 bp upstream
SNP A/G A G
rs580347179
MGI SNP Detail
Chr8:110340487 Gm64800 within coordinates of
Tssr79361 373 bp upstream
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs241485338
MGI SNP Detail
Chr8:110340508 Gm64800 within coordinates of
Tssr79361 352 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A G A A A A A A G A A A A A A A G A A A
rs253261722
MGI SNP Detail
Chr8:110340557 Gm64800 within coordinates of
Tssr79361 303 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs223813281
MGI SNP Detail
Chr8:110340581 Gm64800 within coordinates of
Tssr79361 279 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs246057275
MGI SNP Detail
Chr8:110340634 Gm64800 within coordinates of
Tssr79361 226 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C T C C C C C C T C C C C C C C T C C C C
rs31182290
MGI SNP Detail
Chr8:110340671 Gm64800 within coordinates of
Tssr79361 189 bp upstream
SNP A/C C C C C C C C C C C A C C A C
rs31182293
MGI SNP Detail
Chr8:110340729 Gm64800 within coordinates of
Tssr79361 131 bp upstream
SNP C/T T T T T T T C T T T C T T T
rs241695985
MGI SNP Detail
Chr8:110340732 Gm64800 within coordinates of
Tssr79361 128 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G G A G G G G G G A G G G G G G G G G G G G
rs259180706
MGI SNP Detail
Chr8:110340740 Gm64800 within coordinates of
Tssr79361 120 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs228285075
MGI SNP Detail
Chr8:110340744 Gm64800 within coordinates of
Tssr79361 116 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C T C C C C C C T C C C C C C C C C C C C
rs31183206
MGI SNP Detail
Chr8:110340767 Tssr79361 93 bp upstream
SNP G/T G G G G G G G G G T G G T G
rs265499379
MGI SNP Detail
Alliance Variant
Chr8:110340835 Pkd1l3 mRNA-UTR
Tssr79361 25 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs31183209
MGI SNP Detail
Alliance Variant
Chr8:110340844 Pkd1l3 mRNA-UTR
Tssr79361 16 bp upstream
SNP A/G G G G G G G A G G G A G G A G
rs254858885
MGI SNP Detail
Alliance Variant
Chr8:110340891 Pkd1l3 mRNA-UTR
Tssr79361 20 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs31183212
MGI SNP Detail
Alliance Variant
Chr8:110341009 Pkd1l3 mRNA-UTR
Tssr79361 138 bp downstream
SNP C/T C T T T T T
rs212458821
MGI SNP Detail
Alliance Variant
Chr8:110341043 Pkd1l3 mRNA-UTR
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 172 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31183775
MGI SNP Detail
Alliance Variant
Chr8:110341044 Pkd1l3 mRNA-UTR
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 173 bp downstream
SNP A/G A G A A G A G
rs248599290
MGI SNP Detail
Alliance Variant
Chr8:110341059 Pkd1l3 mRNA-UTR
Pkd1l3 Noncoding-Transcript-Variant
Rr669717 within coordinates of
Tssr79361 188 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs31183778
MGI SNP Detail
Alliance Variant
Chr8:110341157 Pkd1l3 Coding-Synonymous
Pkd1l3 Noncoding-Transcript-Variant
Rr669717 within coordinates of
Tssr79361 286 bp downstream
SNP A/G G G G G A G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216470502
MGI SNP Detail
Alliance Variant
Chr8:110341200 Pkd1l3 Coding-NonSynonymous
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 329 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs235111195
MGI SNP Detail
Alliance Variant
Chr8:110341222 Pkd1l3 Coding-NonSynonymous
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 351 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31183781
MGI SNP Detail
Alliance Variant
Chr8:110341237 Pkd1l3 Coding-NonSynonymous
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 366 bp downstream
SNP C/G G G G G G C G G G C G G C G
rs223614989
MGI SNP Detail
Alliance Variant
Chr8:110341393 Pkd1l3 Coding-NonSynonymous
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 522 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31184524
MGI SNP Detail
Alliance Variant
Chr8:110341433 Pkd1l3 Coding-Synonymous
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 562 bp downstream
SNP A/G G G G G G G A G G G A G G A G
rs31184526
MGI SNP Detail
Alliance Variant
Chr8:110341466 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 595 bp downstream
SNP A/C C C C A C C C C C C C
rs220554499
MGI SNP Detail
Alliance Variant
Chr8:110341481 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 610 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241611776
MGI SNP Detail
Alliance Variant
Chr8:110341498 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 627 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs583836115
MGI SNP Detail
Alliance Variant
Chr8:110341533 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 662 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs587259995
MGI SNP Detail
Alliance Variant
Chr8:110341534 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 663 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C A C C C C C C A C C C C C C C C C C C C
rs259278063
MGI SNP Detail
Alliance Variant
Chr8:110341576 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 705 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T C T T T T T T C T T T T T T T T T T T T
rs221526141
MGI SNP Detail
Alliance Variant
Chr8:110341699 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 828 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239900140
MGI SNP Detail
Alliance Variant
Chr8:110341788 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 917 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263099915
MGI SNP Detail
Alliance Variant
Chr8:110341803 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 932 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T C T T T T T T C T T T T T T T C T T T T
rs581119861
MGI SNP Detail
Alliance Variant
Chr8:110341804 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 933 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T C T T T T T T C T T T T T T T T T T T T
rs231156277
MGI SNP Detail
Alliance Variant
Chr8:110341827 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 956 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C C C C C C C G C C C C C C G C C C C C C C G C C C C
rs250716582
MGI SNP Detail
Alliance Variant
Chr8:110341844 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 973 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264849246
MGI SNP Detail
Alliance Variant
Chr8:110341848 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 977 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G A G G G G G G A G G G G G G G G G G G G
rs223960969
MGI SNP Detail
Alliance Variant
Chr8:110341872 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1001 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T C T T T T T T C T T T T T T T C T T T T
rs248461178
MGI SNP Detail
Alliance Variant
Chr8:110341879 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1008 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216484175
MGI SNP Detail
Alliance Variant
Chr8:110341888 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1017 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C T C C C C C C T C C C C C C C C C C C C
rs234506315
MGI SNP Detail
Alliance Variant
Chr8:110341889 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1018 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs257628143
MGI SNP Detail
Alliance Variant
Chr8:110341892 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1021 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C T C C C C C C T C C C C C C C C C C C C
rs215035520
MGI SNP Detail
Alliance Variant
Chr8:110341908 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1037 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G G G G G G G C G G G G G G C G G G G G G G C G G G G
rs238418883
MGI SNP Detail
Alliance Variant
Chr8:110341978 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1107 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs256697462
MGI SNP Detail
Alliance Variant
Chr8:110341999 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1128 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G A G G G A G G G G G G A G G G G G G G G G G G G
rs218287694
MGI SNP Detail
Alliance Variant
Chr8:110342045 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1174 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs31184529
MGI SNP Detail
Alliance Variant
Chr8:110342094 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1223 bp downstream
SNP A/G G G G G G G G A G G G
rs252647307
MGI SNP Detail
Alliance Variant
Chr8:110342226 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1355 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs586785070
MGI SNP Detail
Alliance Variant
Chr8:110342252 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1381 bp downstream
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs580631761
MGI SNP Detail
Alliance Variant
Chr8:110342253 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1382 bp downstream
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs245434670
MGI SNP Detail
Alliance Variant
Chr8:110342268 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1397 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs265329315
MGI SNP Detail
Alliance Variant
Chr8:110342280 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1409 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223275971
MGI SNP Detail
Alliance Variant
Chr8:110342304 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1433 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs245814095
MGI SNP Detail
Alliance Variant
Chr8:110342321 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1450 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A G A A A A A A G A A A A A A A G A A A A
rs31181256
MGI SNP Detail
Alliance Variant
Chr8:110342351 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1480 bp downstream
SNP C/T C C C C T C C C T C C T
rs224141936
MGI SNP Detail
Alliance Variant
Chr8:110342425 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1554 bp downstream
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs31181259
MGI SNP Detail
Alliance Variant
Chr8:110342446 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1575 bp downstream
SNP A/G A A A A A G A A A G A A G A
rs260349286
MGI SNP Detail
Alliance Variant
Chr8:110342485 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1614 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A A A C A A A C A A A A A A C A A A A A A A A A A A
rs579299218
MGI SNP Detail
Alliance Variant
Chr8:110342535 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1664 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227922228
MGI SNP Detail
Alliance Variant
Chr8:110342598 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1727 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31181262
MGI SNP Detail
Alliance Variant
Chr8:110342628 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1757 bp downstream
SNP A/G G G G G G A G G G A G G A G
rs31182155
MGI SNP Detail
Alliance Variant
Chr8:110342639 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1768 bp downstream
SNP A/G G G A A G A A G A G G
rs230408264
MGI SNP Detail
Alliance Variant
Chr8:110342684 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1813 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254527717
MGI SNP Detail
Alliance Variant
Chr8:110342693 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1822 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212461462
MGI SNP Detail
Alliance Variant
Chr8:110342744 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1873 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T C T T T T T T C T T T T T T T C T T T T
rs235485687
MGI SNP Detail
Alliance Variant
Chr8:110342797 Pkd1l3 Intron
Pkd1l3 Noncoding-Transcript-Variant
Tssr79361 1926 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
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Showing SNP(s) 1 - 97 of 97

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory