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Mouse SNP Summary
Symbol
Name
ID 		Tssr80518
transcription start site region 80518
MGI:6008285

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222955920
MGI SNP Detail		 Chr8:17583219 Csmd1 within coordinates of
Gm63936 within coordinates of
Rr660278 within coordinates of
Tssr80518 1987 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C C A A A A C A A C C C A C A A A A A A A C A A A A
rs245333636
MGI SNP Detail		 Chr8:17583288 Csmd1 within coordinates of
Gm63936 within coordinates of
Tssr80518 1918 bp downstream
 SNP C/G/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C G C C C C
rs255724119
MGI SNP Detail		 Chr8:17583322 Csmd1 within coordinates of
Gm63936 within coordinates of
Tssr80518 1884 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs227525882
MGI SNP Detail		 Chr8:17583342 Csmd1 within coordinates of
Gm63936 within coordinates of
Tssr80518 1864 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240957346
MGI SNP Detail		 Chr8:17583390 Csmd1 within coordinates of
Gm63936 within coordinates of
Tssr80518 1816 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258298070
MGI SNP Detail		 Chr8:17583408 Csmd1 within coordinates of
Gm63936 within coordinates of
Tssr80518 1798 bp downstream
 SNP A/C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G G C C C C G C C G G G C G C C C C C C C A C C C C
rs226891160
MGI SNP Detail		 Chr8:17583491 Csmd1 within coordinates of
Gm63936 within coordinates of
Tssr80518 1715 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T T C T T C C C T C T T T T T T T C T T T T
rs238488915
MGI SNP Detail		 Chr8:17583513 Csmd1 within coordinates of
Gm63936 within coordinates of
Tssr80518 1693 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265058836
MGI SNP Detail		 Chr8:17583562 Csmd1 within coordinates of
Gm63936 within coordinates of
Tssr80518 1644 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G G A A A A G A A G G G A G A A A A A A A A A A A A
rs228760380
MGI SNP Detail		 Chr8:17583587 Csmd1 within coordinates of
Gm63936 within coordinates of
Tssr80518 1619 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252581536
MGI SNP Detail		 Chr8:17583734 Csmd1 within coordinates of
Gm63936 within coordinates of
Tssr80518 1472 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218942160
MGI SNP Detail		 Chr8:17583762 Csmd1 within coordinates of
Gm63936 within coordinates of
Tssr80518 1444 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G G C C C C C C C G G G C G C C C C C C C C C C C C
rs233934483
MGI SNP Detail		 Chr8:17583844 Csmd1 within coordinates of
Gm63936 within coordinates of
Tssr80518 1362 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A A C C C C A C C A A A C A C C C C C C C A C C C C
rs579922482
MGI SNP Detail		 Chr8:17583930 Csmd1 within coordinates of
Gm63936 within coordinates of
Tssr80518 1276 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T C T T T T T T T T T T T T
rs583336083
MGI SNP Detail		 Chr8:17583999 Csmd1 within coordinates of
Gm63936 within coordinates of
Tssr80518 1207 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T C
rs215011740
MGI SNP Detail		 Chr8:17584082 Csmd1 within coordinates of
Gm63936 within coordinates of
Tssr80518 1124 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C G G G C C C C C C C C C C C C C C
rs585235519
MGI SNP Detail		 Chr8:17584135 Csmd1 within coordinates of
Gm63936 within coordinates of
Tssr80518 1071 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232372977
MGI SNP Detail		 Chr8:17584156 Csmd1 within coordinates of
Gm63936 within coordinates of
Tssr80518 1050 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A
rs250952595
MGI SNP Detail		 Chr8:17584206 Csmd1 within coordinates of
Gm63936 within coordinates of
Tssr80518 1000 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs212873391
MGI SNP Detail		 Chr8:17584257 Csmd1 within coordinates of
Gm63936 within coordinates of
Rr660279 within coordinates of
Tssr80518 949 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235754907
MGI SNP Detail		 Chr8:17584258 Csmd1 within coordinates of
Gm63936 within coordinates of
Rr660279 within coordinates of
Tssr80518 948 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G G A A A A G A A G G G A G A A A A A A A G A A A A
rs261196704
MGI SNP Detail		 Chr8:17584378 Csmd1 within coordinates of
Gm63936 within coordinates of
Rr660279 within coordinates of
Tssr80518 828 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A G G G G G G G A A A G G G G G G G G G G G G G G
rs226988894
MGI SNP Detail		 Chr8:17584386 Csmd1 within coordinates of
Gm63936 within coordinates of
Rr660279 within coordinates of
Tssr80518 820 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G G T T T T G T T G G G T G T T T T T T T G T T T T
rs241111991
MGI SNP Detail		 Chr8:17584398 Csmd1 within coordinates of
Gm63936 within coordinates of
Rr660279 within coordinates of
Tssr80518 808 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252098066
MGI SNP Detail		 Chr8:17584776 Cpgi20134 within coordinates of
Csmd1 within coordinates of
Gm63936 within coordinates of
Rr660279 within coordinates of
Tssr80518 430 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G T T G G G G G G G T T T G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs220939182
MGI SNP Detail		 Chr8:17585065 Cpgi20134 within coordinates of
Csmd1 within coordinates of
Gm63936 within coordinates of
Rr660279 within coordinates of
Tssr80518 141 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G C C G G G G G G G C C C G G G G G G G G G G G G G G
rs238426945
MGI SNP Detail		 Chr8:17585105 Cpgi20134 within coordinates of
Csmd1 within coordinates of
Gm63936 within coordinates of
Rr660279 within coordinates of
Tssr80518 101 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs579629734
MGI SNP Detail		 Chr8:17585224 Cpgi20134 within coordinates of
Csmd1 within coordinates of
Gm63936 within coordinates of
Rr660279 within coordinates of
Tssr80518 11 bp upstream
Tssr80519 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A A T T T T T T T A A A T T T T T T T T T T T T T T
rs262389134
MGI SNP Detail		 Chr8:17585718 Cpgi20134 within coordinates of
Gm63936 within coordinates of
Rr660280 within coordinates of
Tssr80518 505 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs229328938
MGI SNP Detail		 Chr8:17585737 Cpgi20134 within coordinates of
Gm63936 within coordinates of
Rr660280 within coordinates of
Tssr80518 524 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32898212
MGI SNP Detail		 Chr8:17585740 Cpgi20134 within coordinates of
Gm63936 within coordinates of
Rr660280 within coordinates of
Tssr80518 527 bp upstream
 SNP A/C A A C A C A
rs266143941
MGI SNP Detail		 Chr8:17585784 Cpgi20134 within coordinates of
Gm63936 within coordinates of
Rr660280 within coordinates of
Tssr80518 571 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T T C C C C C C C T T T C C C C C C C C C C C C C C
rs228474930
MGI SNP Detail		 Chr8:17585852 Gm63936 within coordinates of
Tssr80518 639 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247166515
MGI SNP Detail		 Chr8:17585865 Gm63936 within coordinates of
Tssr80518 652 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs214952536
MGI SNP Detail		 Chr8:17585883 Gm63936 within coordinates of
Tssr80518 670 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs226319753
MGI SNP Detail		 Chr8:17585890 Gm63936 within coordinates of
Tssr80518 677 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs244807033
MGI SNP Detail		 Chr8:17585892 Gm63936 within coordinates of
Tssr80518 679 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212449574
MGI SNP Detail		 Chr8:17585910 Gm63936 within coordinates of
Tssr80518 697 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G G A A A A G A A G G G A G A A A A A A A G A A A A
rs235879478
MGI SNP Detail		 Chr8:17585931 Gm63936 within coordinates of
Tssr80518 718 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249458037
MGI SNP Detail		 Chr8:17586085 Gm63936 within coordinates of
Tssr80518 872 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219630742
MGI SNP Detail		 Chr8:17586124 Gm63936 within coordinates of
Tssr80518 911 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs234617100
MGI SNP Detail		 Chr8:17586262 Gm63936 within coordinates of
Tssr80518 1049 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252223946
MGI SNP Detail		 Chr8:17586317 Gm63936 within coordinates of
Tssr80518 1104 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs221015857
MGI SNP Detail		 Chr8:17586323 Gm63936 within coordinates of
Tssr80518 1110 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs232248245
MGI SNP Detail		 Chr8:17586324 Gm63936 within coordinates of
Tssr80518 1111 bp upstream
 SNP A/C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs262115190
MGI SNP Detail		 Chr8:17586445 Gm63936 within coordinates of
Tssr80518 1232 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221644489
MGI SNP Detail		 Chr8:17586446 Gm63936 within coordinates of
Tssr80518 1233 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244172906
MGI SNP Detail		 Chr8:17586474 Gm63936 within coordinates of
Tssr80518 1261 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs264404058
MGI SNP Detail		 Chr8:17586480 Gm63936 within coordinates of
Tssr80518 1267 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222683746
MGI SNP Detail		 Chr8:17586540 Gm63936 within coordinates of
Tssr80518 1327 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs241254101
MGI SNP Detail		 Chr8:17586569 Gm63936 within coordinates of
Tssr80518 1356 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258945829
MGI SNP Detail		 Chr8:17586596 Gm63936 within coordinates of
Tssr80518 1383 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs226438843
MGI SNP Detail		 Chr8:17586629 Gm63936 within coordinates of
Tssr80518 1416 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250435743
MGI SNP Detail		 Chr8:17586703 Gm63936 within coordinates of
Tssr80518 1490 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264813243
MGI SNP Detail		 Chr8:17586818 Gm63936 within coordinates of
Tssr80518 1605 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A A G G G G A G G A A A G A G G G G G G G A G G G G
rs227274788
MGI SNP Detail		 Chr8:17586845 Gm63936 within coordinates of
Tssr80518 1632 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T T C T T C C C T C T T T T T T T T T T T T
rs259811294
MGI SNP Detail		 Chr8:17586874 Gm63936 within coordinates of
Tssr80518 1661 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs587564828
MGI SNP Detail		 Chr8:17586957 Gm63936 within coordinates of
Tssr80518 1744 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs217574188
MGI SNP Detail		 Chr8:17586963 Gm63936 within coordinates of
Tssr80518 1750 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234709025
MGI SNP Detail		 Chr8:17586974 Gm63936 within coordinates of
Tssr80518 1761 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T T C C C C C C C T T T C T C C C C C C C C C C C C
rs246333405
MGI SNP Detail		 Chr8:17586975 Gm63936 within coordinates of
Tssr80518 1762 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215416106
MGI SNP Detail		 Chr8:17586979 Gm63936 within coordinates of
Tssr80518 1766 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232417164
MGI SNP Detail		 Chr8:17587015 Gm63936 within coordinates of
Tssr80518 1802 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs581645112
MGI SNP Detail		 Chr8:17587139 Gm63936 within coordinates of
Tssr80518 1926 bp upstream
 SNP A/G/T A A A A A A A G A A A A A A A A A A A A A A A A T A A
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Showing SNP(s) 1 - 64 of 64
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory