About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Tssr81328
transcription start site region 81328
MGI:6009095

<< first < prev1 next > last >>
Showing SNP(s) 1 - 67 of 67

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs3688051
MGI SNP Detail		 Chr8:57771451 Hand2os1 within coordinates of
Rr186642 within coordinates of
Rr542 within coordinates of
Tssr81328 1986 bp downstream
 SNP A/G A A A G G A
rs581134760
MGI SNP Detail		 Chr8:57771577 Hand2os1 within coordinates of
Rr186642 within coordinates of
Rr542 within coordinates of
Tssr81328 1860 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs260521206
MGI SNP Detail		 Chr8:57771599 Hand2os1 within coordinates of
Rr186642 within coordinates of
Rr542 within coordinates of
Tssr81328 1838 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229123095
MGI SNP Detail		 Chr8:57771611 Hand2os1 within coordinates of
Rr186642 within coordinates of
Rr542 within coordinates of
Tssr81328 1826 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246210801
MGI SNP Detail		 Chr8:57771647 Hand2os1 within coordinates of
Rr186642 within coordinates of
Rr542 within coordinates of
Tssr81328 1790 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs215710559
MGI SNP Detail		 Chr8:57771648 Hand2os1 within coordinates of
Rr186642 within coordinates of
Rr542 within coordinates of
Tssr81328 1789 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs237612207
MGI SNP Detail		 Chr8:57771744 Hand2os1 within coordinates of
Rr186642 within coordinates of
Rr542 within coordinates of
Tssr81328 1693 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs251157853
MGI SNP Detail		 Chr8:57771778 Hand2os1 within coordinates of
Rr186642 within coordinates of
Rr542 within coordinates of
Tssr81328 1659 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs33302390
MGI SNP Detail		 Chr8:57771797 Hand2os1 within coordinates of
Rr186642 within coordinates of
Rr542 within coordinates of
Tssr81328 1640 bp downstream
 SNP G/T G G T T T G
rs46584804
MGI SNP Detail		 Chr8:57771822 Hand2os1 within coordinates of
Rr186642 within coordinates of
Rr542 within coordinates of
Tssr81328 1615 bp downstream
 SNP G/T G G G G G G G T T G G T G G G G T T G G G T G G G G T T T T
rs32806183
MGI SNP Detail		 Chr8:57771839 Hand2os1 within coordinates of
Rr186642 within coordinates of
Rr542 within coordinates of
Tssr81328 1598 bp downstream
 SNP A/G A A G G G A
rs235036273
MGI SNP Detail		 Chr8:57771857 Hand2os1 within coordinates of
Rr186642 within coordinates of
Rr542 within coordinates of
Tssr81328 1580 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs33277306
MGI SNP Detail		 Chr8:57771869 Hand2os1 within coordinates of
Rr186642 within coordinates of
Rr542 within coordinates of
Tssr81328 1568 bp downstream
 SNP C/G G G C C C G
rs222147646
MGI SNP Detail		 Chr8:57771871 Hand2os1 within coordinates of
Rr186642 within coordinates of
Rr542 within coordinates of
Tssr81328 1566 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235435938
MGI SNP Detail		 Chr8:57771928 Hand2os1 within coordinates of
Rr186642 within coordinates of
Rr542 within coordinates of
Tssr81328 1509 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G G
rs48930834
MGI SNP Detail		 Chr8:57772209 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 1228 bp downstream
 SNP A/C A A C C A
rs225164571
MGI SNP Detail		 Chr8:57772220 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 1217 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246196827
MGI SNP Detail		 Chr8:57772293 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 1144 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs45711004
MGI SNP Detail		 Chr8:57772317 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 1120 bp downstream
 SNP C/T C C T C
rs220264044
MGI SNP Detail		 Chr8:57772370 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 1067 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs237993816
MGI SNP Detail		 Chr8:57772440 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 997 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A
rs260625325
MGI SNP Detail		 Chr8:57772446 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 991 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs229086290
MGI SNP Detail		 Chr8:57772447 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 990 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs584583175
MGI SNP Detail		 Chr8:57772485 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 952 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50364509
MGI SNP Detail		 Chr8:57772514 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 923 bp downstream
 SNP C/G G C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs48358889
MGI SNP Detail		 Chr8:57772550 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 887 bp downstream
 SNP A/C A A C A
rs47640962
MGI SNP Detail		 Chr8:57772629 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 808 bp downstream
 SNP A/G A A G A
rs50495508
MGI SNP Detail		 Chr8:57772723 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 714 bp downstream
 SNP C/T T T C C T
rs211741453
MGI SNP Detail		 Chr8:57772730 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 707 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs236846952
MGI SNP Detail		 Chr8:57772757 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 680 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs51030835
MGI SNP Detail		 Chr8:57772777 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 660 bp downstream
 SNP A/C C A A C
rs46159369
MGI SNP Detail		 Chr8:57772835 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 602 bp downstream
 SNP A/C A C C A
rs48968565
MGI SNP Detail		 Chr8:57772853 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 584 bp downstream
 SNP A/G G G A A G
rs251461451
MGI SNP Detail		 Chr8:57772866 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 571 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs51848311
MGI SNP Detail		 Chr8:57772878 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 559 bp downstream
 SNP G/T T T G G T
rs51251308
MGI SNP Detail		 Chr8:57772888 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 549 bp downstream
 SNP A/G A A G G A
rs51253306
MGI SNP Detail		 Chr8:57772893 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 544 bp downstream
 SNP C/T C C T T C
rs50419359
MGI SNP Detail		 Chr8:57772946 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 491 bp downstream
 SNP G/T T T G G T
rs238154210
MGI SNP Detail		 Chr8:57773067 Cpgi20357 within coordinates of
Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 370 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46508582
MGI SNP Detail		 Chr8:57773305 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 132 bp downstream
 SNP A/G A A G G A
rs223425853
MGI SNP Detail		 Chr8:57773358 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 79 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240535754
MGI SNP Detail		 Chr8:57773389 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81325 within coordinates of
Tssr81328 48 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T
rs263498632
MGI SNP Detail		 Chr8:57773435 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 2 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs46321981
MGI SNP Detail		 Chr8:57773451 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 within coordinates of
 SNP G/T T T G G T
rs243798227
MGI SNP Detail		 Chr8:57773455 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs264551577
MGI SNP Detail		 Chr8:57773458 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 2 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
rs223942032
MGI SNP Detail		 Chr8:57773507 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 51 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G G G G G G G
rs246424642
MGI SNP Detail		 Chr8:57773526 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 70 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs217119261
MGI SNP Detail		 Chr8:57773529 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 73 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C A C C C C C C C C C C C C
rs229548404
MGI SNP Detail		 Chr8:57773549 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 93 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs245642122
MGI SNP Detail		 Chr8:57773653 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 197 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs51733244
MGI SNP Detail		 Chr8:57773814 Hand2os1 within coordinates of
Rr186642 within coordinates of
Tssr81328 358 bp upstream
 SNP G/T G T
rs217031479
MGI SNP Detail		 Chr8:57773902 Cpgi20358 within coordinates of
Rr186642 within coordinates of
Tssr81328 446 bp upstream
Tssr81331 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A A A A A A A T A A A A A A A A A A A A
rs238462144
MGI SNP Detail		 Chr8:57773927 Cpgi20358 within coordinates of
Rr186642 within coordinates of
Tssr81328 471 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs258007666
MGI SNP Detail		 Chr8:57774320 Cpgi20358 within coordinates of
Hand2 within coordinates of
Rr186642 within coordinates of
Tssr81328 864 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs212491851
MGI SNP Detail		 Chr8:57774483 Cpgi20358 within coordinates of
Hand2 within coordinates of
Rr186642 within coordinates of
Tssr81328 1027 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50932130
MGI SNP Detail		 Chr8:57774541 Cpgi20358 within coordinates of
Hand2 within coordinates of
Rr186642 within coordinates of
Tssr81328 1085 bp upstream
 SNP G/T G T
rs254472736
MGI SNP Detail		 Chr8:57774546 Cpgi20358 within coordinates of
Hand2 within coordinates of
Rr186642 within coordinates of
Tssr81328 1090 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs223558302
MGI SNP Detail		 Chr8:57774576 Cpgi20358 within coordinates of
Hand2 within coordinates of
Rr186642 within coordinates of
Tssr81328 1120 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs582525073
MGI SNP Detail		 Chr8:57774602 Cpgi20358 within coordinates of
Hand2 within coordinates of
Rr186642 within coordinates of
Tssr81328 1146 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240495190
MGI SNP Detail		 Chr8:57774625 Cpgi20358 within coordinates of
Hand2 within coordinates of
Rr186642 within coordinates of
Tssr81328 1169 bp upstream
 SNP A/G G G A G A A A A A A G G G G G G G A G A A G G G G A G G G G G G G A G A A A G A G G G G G G
rs263336364
MGI SNP Detail		 Chr8:57774678 Cpgi20358 within coordinates of
Hand2 within coordinates of
Rr186642 within coordinates of
Tssr81328 1222 bp upstream
 SNP C/G C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs222400238
MGI SNP Detail		 Chr8:57774918 Cpgi20358 within coordinates of
Hand2 within coordinates of
Rr186642 within coordinates of
Tssr81328 1462 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246750805
MGI SNP Detail		 Chr8:57774931 Cpgi20358 within coordinates of
Hand2 within coordinates of
Rr186642 within coordinates of
Tssr81328 1475 bp upstream
 SNP A/C C C A C A A A A A C C C C C C C C A C A A C C C C A C C C C C C C A C A A C A C C C C C C C
rs261306134
MGI SNP Detail		 Chr8:57775082 Cpgi20358 within coordinates of
Hand2 within coordinates of
Rr186642 within coordinates of
Tssr81328 1626 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs224066629
MGI SNP Detail		 Chr8:57775118 Cpgi20358 within coordinates of
Hand2 within coordinates of
Rr186642 within coordinates of
Tssr81328 1662 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T C T T T T T T T T T T T T
rs240648605
MGI SNP Detail		 Chr8:57775319 Cpgi20358 within coordinates of
Hand2 within coordinates of
Rr186642 within coordinates of
Tssr81328 1863 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
<< first < prev1 next > last >>
Showing SNP(s) 1 - 67 of 67
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory