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Mouse SNP Summary
Symbol
Name
ID
Tssr84044
transcription start site region 84044
MGI:6011811

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222312767
MGI SNP Detail
Chr9:21632976 Gm26511 within coordinates of
Tssr84044 1924 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240367843
MGI SNP Detail
Chr9:21633003 Gm26511 within coordinates of
Tssr84044 1897 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs257584270
MGI SNP Detail
Chr9:21633027 Gm26511 within coordinates of
Tssr84044 1873 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs220274415
MGI SNP Detail
Chr9:21633166 Gm26511 within coordinates of
Tssr84044 1734 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs237786465
MGI SNP Detail
Chr9:21633202 Gm26511 within coordinates of
Tssr84044 1698 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264902128
MGI SNP Detail
Chr9:21633220 Gm26511 within coordinates of
Tssr84044 1680 bp upstream
SNP C/T T T T T T T T T C T T T T T T T T T C C T T C T T C T C T C T C C C C T C T C T C T T C C T C C T C C C
rs227821088
MGI SNP Detail
Chr9:21633304 Gm26511 within coordinates of
Tssr84044 1596 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A A G A A A A
rs260311737
MGI SNP Detail
Chr9:21633337 Gm26511 within coordinates of
Tssr84044 1563 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs264034562
MGI SNP Detail
Chr9:21633369 Gm26511 within coordinates of
Tssr84044 1531 bp upstream
SNP C/G G G G G G G G G C G G G G G G G G G C C G G C G G C G C G C G C C C C G C G C G C G G C C G C G C G C C C
rs46233056
MGI SNP Detail
Chr9:21633423 Gm26511 within coordinates of
Tssr84044 1477 bp upstream
SNP A/G G G G G G G G G A G
rs47890620
MGI SNP Detail
Chr9:21633546 Gm26511 within coordinates of
Tssr84044 1354 bp upstream
SNP C/G G G G G G G G G G G C G
rs214326735
MGI SNP Detail
Chr9:21633649 Gm26511 within coordinates of
Tssr84044 1251 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs231537437
MGI SNP Detail
Chr9:21633654 Gm26511 within coordinates of
Tssr84044 1246 bp upstream
SNP A/G G G G G G G G G A G G G G G G G G G A G G G G G G A G G G A G A A G A G A G A G G G G A A G A G G G A A G
rs249703262
MGI SNP Detail
Chr9:21633675 Gm26511 within coordinates of
Tssr84044 1225 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G T G G G G G G G G G G G G G G T G G G G
rs211940976
MGI SNP Detail
Chr9:21633685 Gm26511 within coordinates of
Tssr84044 1215 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs240053336
MGI SNP Detail
Chr9:21633687 Gm26511 within coordinates of
Tssr84044 1213 bp upstream
SNP A/G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G A G G G G
rs263631816
MGI SNP Detail
Chr9:21633735 Gm26511 within coordinates of
Tssr84044 1165 bp upstream
SNP C/T C C C C C C C C T C C C C C C C C C T C C C C C C T C C C T C T T C T C T C T C C C C T T C T C C C T T C
rs221162587
MGI SNP Detail
Chr9:21633818 Gm26511 within coordinates of
Tssr84044 1082 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs233946109
MGI SNP Detail
Chr9:21633835 Gm26511 within coordinates of
Tssr84044 1065 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs251548563
MGI SNP Detail
Chr9:21633876 Gm26511 within coordinates of
Tssr84044 1024 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs220305338
MGI SNP Detail
Chr9:21633997 Gm26511 within coordinates of
Tssr84044 903 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs578659974
MGI SNP Detail
Chr9:21634033 Gm26511 within coordinates of
Rr206061 within coordinates of
Tssr84044 867 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs246295634
MGI SNP Detail
Chr9:21634065 Gm26511 within coordinates of
Rr206061 within coordinates of
Tssr84044 835 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262070128
MGI SNP Detail
Chr9:21634088 Gm26511 within coordinates of
Rr206061 within coordinates of
Tssr84044 812 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220323973
MGI SNP Detail
Chr9:21634108 Gm26511 within coordinates of
Rr206061 within coordinates of
Tssr84044 792 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs248479102
MGI SNP Detail
Chr9:21634298 Gm26511 within coordinates of
Rr206061 within coordinates of
Tssr84044 602 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260730345
MGI SNP Detail
Chr9:21634300 Gm26511 within coordinates of
Rr206061 within coordinates of
Tssr84044 600 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46062776
MGI SNP Detail
Chr9:21634344 Gm26511 within coordinates of
Rr206061 within coordinates of
Tssr84044 556 bp upstream
SNP A/G G G A
rs49899299
MGI SNP Detail
Chr9:21634346 Gm26511 within coordinates of
Rr206061 within coordinates of
Tssr84044 554 bp upstream
SNP C/T T T C
rs240530471
MGI SNP Detail
Chr9:21634358 Gm26511 within coordinates of
Rr206061 within coordinates of
Tssr84044 542 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs48460351
MGI SNP Detail
Chr9:21634523 Cpgi21450 within coordinates of
Gm26511 within coordinates of
Rr206061 within coordinates of
Tssr84044 377 bp upstream
SNP A/T T T T T T T T T T T A A T T T
rs258297036
MGI SNP Detail
Chr9:21634641 Cpgi21450 within coordinates of
Gm26511 within coordinates of
Rr206061 within coordinates of
Tssr84044 259 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225704810
MGI SNP Detail
Chr9:21634708 Cpgi21450 within coordinates of
Gm26511 within coordinates of
Rr206061 within coordinates of
Rr401274 within coordinates of
Tssr84044 192 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs47753401
MGI SNP Detail
Chr9:21634710 Cpgi21450 within coordinates of
Gm26511 within coordinates of
Rr206061 within coordinates of
Rr401274 within coordinates of
Tssr84044 190 bp upstream
SNP C/G C C G
rs48659890
MGI SNP Detail
Chr9:21634715 Cpgi21450 within coordinates of
Rr206061 within coordinates of
Rr401274 within coordinates of
Tssr84044 185 bp upstream
SNP A/G G G A
rs234769351
MGI SNP Detail
Chr9:21634722 Cpgi21450 within coordinates of
Rr206061 within coordinates of
Rr401274 within coordinates of
Tssr84044 178 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253716586
MGI SNP Detail
Chr9:21634790 Cpgi21450 within coordinates of
Rr206061 within coordinates of
Rr401274 within coordinates of
Tssr84044 110 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G
rs582091713
MGI SNP Detail
Chr9:21634801 Cpgi21450 within coordinates of
Rr206061 within coordinates of
Rr401274 within coordinates of
Tssr84044 99 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs215645370
MGI SNP Detail
Chr9:21634837 Cpgi21450 within coordinates of
Rr206061 within coordinates of
Rr401274 within coordinates of
Tssr84044 63 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs232549921
MGI SNP Detail
Chr9:21634961 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Rr401274 within coordinates of
Tssr84044 50 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs250141416
MGI SNP Detail
Chr9:21635053 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 142 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214796497
MGI SNP Detail
Chr9:21635098 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 187 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236512744
MGI SNP Detail
Chr9:21635153 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 242 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs261719549
MGI SNP Detail
Chr9:21635167 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 256 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220776201
MGI SNP Detail
Chr9:21635173 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 262 bp downstream
SNP C/G C C C C C C C C G C C C C C C C C C G C C C C C C G C C C C G G C G C G C G C C C C G G C G C C C G G G
rs251680492
MGI SNP Detail
Chr9:21635187 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 276 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254583656
MGI SNP Detail
Chr9:21635252 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 341 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50776485
MGI SNP Detail
Chr9:21635262 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 351 bp downstream
SNP C/T C C C C C C T C C C T C C
rs240611893
MGI SNP Detail
Chr9:21635285 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 374 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G C G G C
rs258378702
MGI SNP Detail
Chr9:21635333 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 422 bp downstream
SNP G/T G G G G G G G G T G G G G G G G G G T G G G G G G T G G G G T T G T G T G T G G G G T T G T G G G T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs230181612
MGI SNP Detail
Chr9:21635341 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 430 bp downstream
SNP C/G C C C C C C C C G C C C C C C C C C G C C C C C C G C C C C G G C G C G C G C C C C G G C G C C C G G C
rs242149789
MGI SNP Detail
Chr9:21635359 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 448 bp downstream
SNP A/G G G G G G G G G A G G G G G G G G G A G G G G G G A G G G A G A A G A G A G A G G G G A A G A G G G A A A
rs49592582
MGI SNP Detail
Chr9:21635370 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 459 bp downstream
SNP C/T C C C C T C C T C
rs233720472
MGI SNP Detail
Chr9:21635391 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 480 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258995834
MGI SNP Detail
Chr9:21635406 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 495 bp downstream
SNP A/G G G G G G G G G A G G G G G G G G G A G G G G G G A G G G A G A A A G A G A G G G G A A G A G G G A A A
rs215725222
MGI SNP Detail
Chr9:21635407 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 496 bp downstream
SNP C/G G G G G G G G G C G G G G G G G G G C G G G G G G C G G G C G C C C G C G C G G G G C C G C G G G C C C
rs226600055
MGI SNP Detail
Chr9:21635412 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 501 bp downstream
SNP A/G A A A A A A A A G A A A A A A A A A G A A A A A A G A A A G A G G G A G A G A A A A G G A G A A A G G G
rs244274362
MGI SNP Detail
Chr9:21635428 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 517 bp downstream
SNP A/G G G G G G G G G A G G G G G G G G G A G G G G G G A G G G A G A A A G A G A G G G G A A G A G G G A A A
rs213314951
MGI SNP Detail
Chr9:21635442 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 531 bp downstream
SNP A/G G G G G G G G G A G G G G G G G G G A G G G G G G A G G G A G A A A G A G A G G G G A A G A G G G A A A
rs238625769
MGI SNP Detail
Chr9:21635452 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 541 bp downstream
SNP C/T T T T T T T T T C T T T T T T T T T C T T T T T T C T T T C T C C C T C T C T T T T C C T C T T T C C C
rs256667709
MGI SNP Detail
Chr9:21635569 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Rr401275 within coordinates of
Tssr84044 658 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs212626233
MGI SNP Detail
Chr9:21635666 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Rr401275 within coordinates of
Tssr84044 755 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240585701
MGI SNP Detail
Chr9:21635705 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Rr401275 within coordinates of
Tssr84044 794 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G C G G G G G G C G G G G G G G G G G G
rs254674368
MGI SNP Detail
Chr9:21635776 Ldlr within coordinates of
Rr206061 within coordinates of
Rr401275 within coordinates of
Tssr84044 865 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs222068785
MGI SNP Detail
Chr9:21635838 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 927 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240645613
MGI SNP Detail
Chr9:21635850 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 939 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs252131519
MGI SNP Detail
Chr9:21635865 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 954 bp downstream
SNP C/T C C C C C C C C T C C C C C C C C C T C C C C C C T C C C T T T C T C T C T C C C C T T C T C C T T T
rs222637888
MGI SNP Detail
Chr9:21635885 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 974 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245027558
MGI SNP Detail
Chr9:21635919 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1008 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261471066
MGI SNP Detail
Chr9:21636159 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1248 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227075748
MGI SNP Detail
Chr9:21636169 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1258 bp downstream
SNP A/C A A A A A A A A C A A A A A A A A A C C A A C A A C A C A C A C C C C A C A C A C A A C C A C C A C C C
rs240732882
MGI SNP Detail
Chr9:21636266 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1355 bp downstream
SNP C/G C C C C C C C C G C C C C C C C C C G G C C C C C G C C C G C G G C G C G C G C C C C G G C G C C G G C
rs257910642
MGI SNP Detail
Chr9:21636373 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1462 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226637723
MGI SNP Detail
Chr9:21636589 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1678 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs244356640
MGI SNP Detail
Chr9:21636592 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1681 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs46489667
MGI SNP Detail
Chr9:21636630 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1719 bp downstream
SNP A/G A A A A G A A A A A G
rs228276321
MGI SNP Detail
Chr9:21636670 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1759 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212413850
MGI SNP Detail
Chr9:21636710 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1799 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs243470255
MGI SNP Detail
Chr9:21636719 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1808 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248278253
MGI SNP Detail
Chr9:21636720 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1809 bp downstream
SNP A/G A A A A A A A A G A A A A A A A A A G G A A A A A G A A A G A G G A G A G A G A A A A G G A G A G A G G G
rs216138759
MGI SNP Detail
Chr9:21636728 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1817 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234203386
MGI SNP Detail
Chr9:21636796 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1885 bp downstream
SNP C/T T T T T T T T T C T T T T T T T T T C C T T T T T C T T T C T C C T C T C T C T T T T C C T C C T C C C
rs252197717
MGI SNP Detail
Chr9:21636833 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1922 bp downstream
SNP A/G G G G G G G G G A G G G G G G G G G A G G G G G G A G G G G A A G A G A G A G G G G A A G A G G A A A
rs222238071
MGI SNP Detail
Chr9:21636845 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1934 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C T C C C C C C C C C C C
rs585492648
MGI SNP Detail
Chr9:21636846 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1935 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A G A A A A A A A A A A A
rs235522305
MGI SNP Detail
Chr9:21636888 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1977 bp downstream
SNP A/G A A A A A A A A G A A A A A A A A A G G A A G A A G A G A A G G G A G A G A G A A G G A G A G A G G G
rs580473739
MGI SNP Detail
Chr9:21636910 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1999 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C A C C C C C C C C C C C C
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Showing SNP(s) 1 - 87 of 87

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory