About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Tssr84044
transcription start site region 84044
MGI:6011811

<< first < prev1 next > last >>
Showing SNP(s) 1 - 87 of 87

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222312767
MGI SNP Detail		 Chr9:21632976 Gm26511 within coordinates of
Tssr84044 1924 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240367843
MGI SNP Detail		 Chr9:21633003 Gm26511 within coordinates of
Tssr84044 1897 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs257584270
MGI SNP Detail		 Chr9:21633027 Gm26511 within coordinates of
Tssr84044 1873 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs220274415
MGI SNP Detail		 Chr9:21633166 Gm26511 within coordinates of
Tssr84044 1734 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs237786465
MGI SNP Detail		 Chr9:21633202 Gm26511 within coordinates of
Tssr84044 1698 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264902128
MGI SNP Detail		 Chr9:21633220 Gm26511 within coordinates of
Tssr84044 1680 bp upstream
 SNP C/T T T T T T T T T C T T T T T T T T T C C T T C T T C T C T C T C C C C T C T C T C T T C C T C C T C C C
rs227821088
MGI SNP Detail		 Chr9:21633304 Gm26511 within coordinates of
Tssr84044 1596 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A A G A A A A
rs260311737
MGI SNP Detail		 Chr9:21633337 Gm26511 within coordinates of
Tssr84044 1563 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs264034562
MGI SNP Detail		 Chr9:21633369 Gm26511 within coordinates of
Tssr84044 1531 bp upstream
 SNP C/G G G G G G G G G C G G G G G G G G G C C G G C G G C G C G C G C C C C G C G C G C G G C C G C G C G C C C
rs46233056
MGI SNP Detail		 Chr9:21633423 Gm26511 within coordinates of
Tssr84044 1477 bp upstream
 SNP A/G G G G G G G G G A G
rs47890620
MGI SNP Detail		 Chr9:21633546 Gm26511 within coordinates of
Tssr84044 1354 bp upstream
 SNP C/G G G G G G G G G G G C G
rs214326735
MGI SNP Detail		 Chr9:21633649 Gm26511 within coordinates of
Tssr84044 1251 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs231537437
MGI SNP Detail		 Chr9:21633654 Gm26511 within coordinates of
Tssr84044 1246 bp upstream
 SNP A/G G G G G G G G G A G G G G G G G G G A G G G G G G A G G G A G A A G A G A G A G G G G A A G A G G G A A G
rs249703262
MGI SNP Detail		 Chr9:21633675 Gm26511 within coordinates of
Tssr84044 1225 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G T G G G G G G G G G G G G G G T G G G G
rs211940976
MGI SNP Detail		 Chr9:21633685 Gm26511 within coordinates of
Tssr84044 1215 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs240053336
MGI SNP Detail		 Chr9:21633687 Gm26511 within coordinates of
Tssr84044 1213 bp upstream
 SNP A/G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G A G G G G
rs263631816
MGI SNP Detail		 Chr9:21633735 Gm26511 within coordinates of
Tssr84044 1165 bp upstream
 SNP C/T C C C C C C C C T C C C C C C C C C T C C C C C C T C C C T C T T C T C T C T C C C C T T C T C C C T T C
rs221162587
MGI SNP Detail		 Chr9:21633818 Gm26511 within coordinates of
Tssr84044 1082 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs233946109
MGI SNP Detail		 Chr9:21633835 Gm26511 within coordinates of
Tssr84044 1065 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs251548563
MGI SNP Detail		 Chr9:21633876 Gm26511 within coordinates of
Tssr84044 1024 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs220305338
MGI SNP Detail		 Chr9:21633997 Gm26511 within coordinates of
Tssr84044 903 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs578659974
MGI SNP Detail		 Chr9:21634033 Gm26511 within coordinates of
Rr206061 within coordinates of
Tssr84044 867 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs246295634
MGI SNP Detail		 Chr9:21634065 Gm26511 within coordinates of
Rr206061 within coordinates of
Tssr84044 835 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262070128
MGI SNP Detail		 Chr9:21634088 Gm26511 within coordinates of
Rr206061 within coordinates of
Tssr84044 812 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220323973
MGI SNP Detail		 Chr9:21634108 Gm26511 within coordinates of
Rr206061 within coordinates of
Tssr84044 792 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs248479102
MGI SNP Detail		 Chr9:21634298 Gm26511 within coordinates of
Rr206061 within coordinates of
Tssr84044 602 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260730345
MGI SNP Detail		 Chr9:21634300 Gm26511 within coordinates of
Rr206061 within coordinates of
Tssr84044 600 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46062776
MGI SNP Detail		 Chr9:21634344 Gm26511 within coordinates of
Rr206061 within coordinates of
Tssr84044 556 bp upstream
 SNP A/G G G A
rs49899299
MGI SNP Detail		 Chr9:21634346 Gm26511 within coordinates of
Rr206061 within coordinates of
Tssr84044 554 bp upstream
 SNP C/T T T C
rs240530471
MGI SNP Detail		 Chr9:21634358 Gm26511 within coordinates of
Rr206061 within coordinates of
Tssr84044 542 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs48460351
MGI SNP Detail		 Chr9:21634523 Cpgi21450 within coordinates of
Gm26511 within coordinates of
Rr206061 within coordinates of
Tssr84044 377 bp upstream
 SNP A/T T T T T T T T T T T A A T T T
rs258297036
MGI SNP Detail		 Chr9:21634641 Cpgi21450 within coordinates of
Gm26511 within coordinates of
Rr206061 within coordinates of
Tssr84044 259 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225704810
MGI SNP Detail		 Chr9:21634708 Cpgi21450 within coordinates of
Gm26511 within coordinates of
Rr206061 within coordinates of
Rr401274 within coordinates of
Tssr84044 192 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs47753401
MGI SNP Detail		 Chr9:21634710 Cpgi21450 within coordinates of
Gm26511 within coordinates of
Rr206061 within coordinates of
Rr401274 within coordinates of
Tssr84044 190 bp upstream
 SNP C/G C C G
rs48659890
MGI SNP Detail		 Chr9:21634715 Cpgi21450 within coordinates of
Rr206061 within coordinates of
Rr401274 within coordinates of
Tssr84044 185 bp upstream
 SNP A/G G G A
rs234769351
MGI SNP Detail		 Chr9:21634722 Cpgi21450 within coordinates of
Rr206061 within coordinates of
Rr401274 within coordinates of
Tssr84044 178 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253716586
MGI SNP Detail		 Chr9:21634790 Cpgi21450 within coordinates of
Rr206061 within coordinates of
Rr401274 within coordinates of
Tssr84044 110 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G
rs582091713
MGI SNP Detail		 Chr9:21634801 Cpgi21450 within coordinates of
Rr206061 within coordinates of
Rr401274 within coordinates of
Tssr84044 99 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs215645370
MGI SNP Detail		 Chr9:21634837 Cpgi21450 within coordinates of
Rr206061 within coordinates of
Rr401274 within coordinates of
Tssr84044 63 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs232549921
MGI SNP Detail		 Chr9:21634961 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Rr401274 within coordinates of
Tssr84044 50 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs250141416
MGI SNP Detail		 Chr9:21635053 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 142 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214796497
MGI SNP Detail		 Chr9:21635098 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 187 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236512744
MGI SNP Detail		 Chr9:21635153 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 242 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs261719549
MGI SNP Detail		 Chr9:21635167 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 256 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220776201
MGI SNP Detail		 Chr9:21635173 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 262 bp downstream
 SNP C/G C C C C C C C C G C C C C C C C C C G C C C C C C G C C C C G G C G C G C G C C C C G G C G C C C G G G
rs251680492
MGI SNP Detail		 Chr9:21635187 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 276 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254583656
MGI SNP Detail		 Chr9:21635252 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 341 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50776485
MGI SNP Detail		 Chr9:21635262 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 351 bp downstream
 SNP C/T C C C C C C T C C C T C C
rs240611893
MGI SNP Detail		 Chr9:21635285 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 374 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G C G G C
rs258378702
MGI SNP Detail		 Chr9:21635333 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 422 bp downstream
 SNP G/T G G G G G G G G T G G G G G G G G G T G G G G G G T G G G G T T G T G T G T G G G G T T G T G G G T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs230181612
MGI SNP Detail		 Chr9:21635341 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 430 bp downstream
 SNP C/G C C C C C C C C G C C C C C C C C C G C C C C C C G C C C C G G C G C G C G C C C C G G C G C C C G G C
rs242149789
MGI SNP Detail		 Chr9:21635359 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 448 bp downstream
 SNP A/G G G G G G G G G A G G G G G G G G G A G G G G G G A G G G A G A A G A G A G A G G G G A A G A G G G A A A
rs49592582
MGI SNP Detail		 Chr9:21635370 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 459 bp downstream
 SNP C/T C C C C T C C T C
rs233720472
MGI SNP Detail		 Chr9:21635391 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 480 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258995834
MGI SNP Detail		 Chr9:21635406 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 495 bp downstream
 SNP A/G G G G G G G G G A G G G G G G G G G A G G G G G G A G G G A G A A A G A G A G G G G A A G A G G G A A A
rs215725222
MGI SNP Detail		 Chr9:21635407 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 496 bp downstream
 SNP C/G G G G G G G G G C G G G G G G G G G C G G G G G G C G G G C G C C C G C G C G G G G C C G C G G G C C C
rs226600055
MGI SNP Detail		 Chr9:21635412 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 501 bp downstream
 SNP A/G A A A A A A A A G A A A A A A A A A G A A A A A A G A A A G A G G G A G A G A A A A G G A G A A A G G G
rs244274362
MGI SNP Detail		 Chr9:21635428 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 517 bp downstream
 SNP A/G G G G G G G G G A G G G G G G G G G A G G G G G G A G G G A G A A A G A G A G G G G A A G A G G G A A A
rs213314951
MGI SNP Detail		 Chr9:21635442 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 531 bp downstream
 SNP A/G G G G G G G G G A G G G G G G G G G A G G G G G G A G G G A G A A A G A G A G G G G A A G A G G G A A A
rs238625769
MGI SNP Detail		 Chr9:21635452 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 541 bp downstream
 SNP C/T T T T T T T T T C T T T T T T T T T C T T T T T T C T T T C T C C C T C T C T T T T C C T C T T T C C C
rs256667709
MGI SNP Detail		 Chr9:21635569 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Rr401275 within coordinates of
Tssr84044 658 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs212626233
MGI SNP Detail		 Chr9:21635666 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Rr401275 within coordinates of
Tssr84044 755 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240585701
MGI SNP Detail		 Chr9:21635705 Cpgi21450 within coordinates of
Ldlr within coordinates of
Rr206061 within coordinates of
Rr401275 within coordinates of
Tssr84044 794 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G C G G G G G G C G G G G G G G G G G G
rs254674368
MGI SNP Detail		 Chr9:21635776 Ldlr within coordinates of
Rr206061 within coordinates of
Rr401275 within coordinates of
Tssr84044 865 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs222068785
MGI SNP Detail		 Chr9:21635838 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 927 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240645613
MGI SNP Detail		 Chr9:21635850 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 939 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs252131519
MGI SNP Detail		 Chr9:21635865 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 954 bp downstream
 SNP C/T C C C C C C C C T C C C C C C C C C T C C C C C C T C C C T T T C T C T C T C C C C T T C T C C T T T
rs222637888
MGI SNP Detail		 Chr9:21635885 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 974 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245027558
MGI SNP Detail		 Chr9:21635919 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1008 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261471066
MGI SNP Detail		 Chr9:21636159 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1248 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227075748
MGI SNP Detail		 Chr9:21636169 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1258 bp downstream
 SNP A/C A A A A A A A A C A A A A A A A A A C C A A C A A C A C A C A C C C C A C A C A C A A C C A C C A C C C
rs240732882
MGI SNP Detail		 Chr9:21636266 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1355 bp downstream
 SNP C/G C C C C C C C C G C C C C C C C C C G G C C C C C G C C C G C G G C G C G C G C C C C G G C G C C G G C
rs257910642
MGI SNP Detail		 Chr9:21636373 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1462 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226637723
MGI SNP Detail		 Chr9:21636589 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1678 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs244356640
MGI SNP Detail		 Chr9:21636592 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1681 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs46489667
MGI SNP Detail		 Chr9:21636630 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1719 bp downstream
 SNP A/G A A A A G A A A A A G
rs228276321
MGI SNP Detail		 Chr9:21636670 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1759 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212413850
MGI SNP Detail		 Chr9:21636710 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1799 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs243470255
MGI SNP Detail		 Chr9:21636719 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1808 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248278253
MGI SNP Detail		 Chr9:21636720 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1809 bp downstream
 SNP A/G A A A A A A A A G A A A A A A A A A G G A A A A A G A A A G A G G A G A G A G A A A A G G A G A G A G G G
rs216138759
MGI SNP Detail		 Chr9:21636728 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1817 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234203386
MGI SNP Detail		 Chr9:21636796 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1885 bp downstream
 SNP C/T T T T T T T T T C T T T T T T T T T C C T T T T T C T T T C T C C T C T C T C T T T T C C T C C T C C C
rs252197717
MGI SNP Detail		 Chr9:21636833 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1922 bp downstream
 SNP A/G G G G G G G G G A G G G G G G G G G A G G G G G G A G G G G A A G A G A G A G G G G A A G A G G A A A
rs222238071
MGI SNP Detail		 Chr9:21636845 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1934 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C T C C C C C C C C C C C
rs585492648
MGI SNP Detail		 Chr9:21636846 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1935 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A G A A A A A A A A A A A
rs235522305
MGI SNP Detail		 Chr9:21636888 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1977 bp downstream
 SNP A/G A A A A A A A A G A A A A A A A A A G G A A G A A G A G A A G G G A G A G A G A A G G A G A G A G G G
rs580473739
MGI SNP Detail		 Chr9:21636910 Ldlr within coordinates of
Rr206061 within coordinates of
Tssr84044 1999 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C A C C C C C C C C C C C C
<< first < prev1 next > last >>
Showing SNP(s) 1 - 87 of 87
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory