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Mouse SNP Summary
Symbol
Name
ID 		Tssr84528
transcription start site region 84528
MGI:6012295

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Showing SNP(s) 1 - 56 of 56

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238677658
MGI SNP Detail		 Chr9:41492513 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 1807 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs30317864
MGI SNP Detail		 Chr9:41492647 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84526 within coordinates of
Tssr84528 1673 bp upstream
 SNP G/T G G T G G
rs51536939
MGI SNP Detail		 Chr9:41492653 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 1667 bp upstream
 SNP C/G G G G G G G G G C C G G
rs30471965
MGI SNP Detail		 Chr9:41492682 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 1638 bp upstream
 SNP G/T G G G G G T G G G G G T G T G G
rs255529379
MGI SNP Detail		 Chr9:41492706 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 1614 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs49904499
MGI SNP Detail		 Chr9:41492757 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 1563 bp upstream
 SNP A/G A A A A A A A A A A A G A
rs242418500
MGI SNP Detail		 Chr9:41493031 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 1289 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262098177
MGI SNP Detail		 Chr9:41493082 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 1238 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs223557874
MGI SNP Detail		 Chr9:41493105 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 1215 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247874987
MGI SNP Detail		 Chr9:41493212 Gm28119 within coordinates of
Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 1108 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs52553687
MGI SNP Detail		 Chr9:41493318 Gm28119 within coordinates of
Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 1002 bp upstream
 SNP A/G G G G G G A G G G G G G G G
rs52092826
MGI SNP Detail		 Chr9:41493421 Gm28119 within coordinates of
Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 899 bp upstream
 SNP C/G G C
rs581878673
MGI SNP Detail		 Chr9:41493423 Gm28119 within coordinates of
Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 897 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs52530395
MGI SNP Detail		 Chr9:41493429 Gm28119 within coordinates of
Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 891 bp upstream
 SNP C/G G C
rs585507815
MGI SNP Detail		 Chr9:41493431 Gm28119 within coordinates of
Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 889 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs52364883
MGI SNP Detail		 Chr9:41493437 Gm28119 within coordinates of
Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 883 bp upstream
 SNP C/G G C
rs227537439
MGI SNP Detail		 Chr9:41493596 Gm28119 within coordinates of
Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 724 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs240772321
MGI SNP Detail		 Chr9:41493652 Gm28119 within coordinates of
Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 668 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29729612
MGI SNP Detail		 Chr9:41493813 Gm28119 within coordinates of
Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 507 bp upstream
 SNP A/T T T T T T T A A T T T T T T A T T
rs227947617
MGI SNP Detail		 Chr9:41493925 Gm28119 within coordinates of
Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 395 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs249701503
MGI SNP Detail		 Chr9:41494000 Gm28119 within coordinates of
Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 320 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30334043
MGI SNP Detail		 Chr9:41494050 Gm28119 within coordinates of
Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 270 bp upstream
 SNP A/T A A A A A A T T A A A A T A T A A
rs30526460
MGI SNP Detail		 Chr9:41494105 Gm28119 within coordinates of
Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 215 bp upstream
 SNP A/G A A A A A A G G A A A A G A G A A
rs246151465
MGI SNP Detail		 Chr9:41494144 Gm28119 within coordinates of
Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 176 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T
rs260554982
MGI SNP Detail		 Chr9:41494154 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 166 bp upstream
 SNP C/G G C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs215574318
MGI SNP Detail		 Chr9:41494160 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 160 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235943858
MGI SNP Detail		 Chr9:41494238 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 82 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs255593584
MGI SNP Detail		 Chr9:41494249 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 71 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29695081
MGI SNP Detail		 Chr9:41494366 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 28 bp downstream
 SNP A/G A A A A A G G A A A G A A
rs237463589
MGI SNP Detail		 Chr9:41494367 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 29 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs579787134
MGI SNP Detail		 Chr9:41494569 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 231 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48058956
MGI SNP Detail		 Chr9:41494712 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 374 bp downstream
 SNP A/G G G G G G A G G G G G G G G
rs33739353
MGI SNP Detail		 Chr9:41494759 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 421 bp downstream
 SNP A/G G G A G G G
rs49743869
MGI SNP Detail		 Chr9:41494774 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 436 bp downstream
 SNP A/G G G G G A G G G G
rs252020158
MGI SNP Detail		 Chr9:41494855 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 517 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221971947
MGI SNP Detail		 Chr9:41494901 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 563 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33750111
MGI SNP Detail		 Chr9:41494925 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 587 bp downstream
 SNP A/G A A A A A A G G A A A A G A A G A A
rs259826093
MGI SNP Detail		 Chr9:41494982 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 644 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220259175
MGI SNP Detail		 Chr9:41495057 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 719 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244877913
MGI SNP Detail		 Chr9:41495070 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 732 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262275651
MGI SNP Detail		 Chr9:41495091 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 753 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs230914296
MGI SNP Detail		 Chr9:41495320 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 982 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs246204540
MGI SNP Detail		 Chr9:41495410 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 1072 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30130223
MGI SNP Detail		 Chr9:41495577 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 1239 bp downstream
 SNP A/T T T T A T A T A A A T T T A T A A T T
rs228349025
MGI SNP Detail		 Chr9:41495712 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 1374 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs249220564
MGI SNP Detail		 Chr9:41495722 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 1384 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212697523
MGI SNP Detail		 Chr9:41495729 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 1391 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs51980976
MGI SNP Detail		 Chr9:41495744 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 1406 bp downstream
 SNP G/T G G G G G G T G G G G G G G G
rs584002145
MGI SNP Detail		 Chr9:41495927 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 1589 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs586455322
MGI SNP Detail		 Chr9:41495960 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 1622 bp downstream
 SNP C/T C C C T C C C C C C C C C T C C C C C C C C C C T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239847143
MGI SNP Detail		 Chr9:41496008 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 1670 bp downstream
 SNP C C C
rs264700524
MGI SNP Detail		 Chr9:41496019 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 1681 bp downstream
 SNP C C C
rs580017190
MGI SNP Detail		 Chr9:41496023 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 1685 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs107729099
MGI SNP Detail		 Chr9:41496208 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 1870 bp downstream
 SNP G G
rs215028777
MGI SNP Detail		 Chr9:41496218 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 1880 bp downstream
 SNP C C C C C C C C C C C C C C
rs228865670
MGI SNP Detail		 Chr9:41496219 Gm69589 within coordinates of
Mir100hg within coordinates of
Tssr84528 1881 bp downstream
 SNP C/T T C
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Showing SNP(s) 1 - 56 of 56
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory