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Mouse SNP Summary
Symbol
Name
ID 		Tssr85008
transcription start site region 85008
MGI:6012775

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Showing SNP(s) 1 - 72 of 72

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs580837900
MGI SNP Detail		 Chr9:49012024 Tssr85008 1996 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs584436605
MGI SNP Detail		 Chr9:49012039 Tssr85008 1981 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs578339719
MGI SNP Detail		 Chr9:49012040 Tssr85008 1980 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs39730668
MGI SNP Detail		 Chr9:49012351 Tssr85008 1669 bp upstream
 SNP C/G C C C C C C C C G G C C C C
rs229699805
MGI SNP Detail		 Chr9:49012352 Tssr85008 1668 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585176311
MGI SNP Detail		 Chr9:49012423 Tssr85008 1597 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29795127
MGI SNP Detail		 Chr9:49012439 Tssr85008 1581 bp upstream
 SNP A/C A C A
rs33693927
MGI SNP Detail		 Chr9:49012440 Tssr85008 1580 bp upstream
 SNP G/T T G T
rs38331239
MGI SNP Detail		 Chr9:49012501 Tssr85008 1519 bp upstream
 SNP A/G G G G G G G A G G A A G G G G
rs579140141
MGI SNP Detail		 Chr9:49012523 Tssr85008 1497 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C C A A A A C A A A A A A A A A A A A A A C A A A C
rs582563146
MGI SNP Detail		 Chr9:49012524 Tssr85008 1496 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs211829836
MGI SNP Detail		 Chr9:49012556 Tssr85008 1464 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs585610331
MGI SNP Detail		 Chr9:49012611 Tssr85008 1409 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235006541
MGI SNP Detail		 Chr9:49012628 Tssr85008 1392 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C C G G G G C G G G G G G G G G G G G G G C G G G G
rs252338980
MGI SNP Detail		 Chr9:49012652 Tssr85008 1368 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs216315322
MGI SNP Detail		 Chr9:49012674 Tssr85008 1346 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs37226338
MGI SNP Detail		 Chr9:49012762 Tssr85008 1258 bp upstream
 SNP C/T C C C C C C T C C T T C C C C
rs258205979
MGI SNP Detail		 Chr9:49012765 Tssr85008 1255 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs222663217
MGI SNP Detail		 Chr9:49012798 Tssr85008 1222 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238336725
MGI SNP Detail		 Chr9:49012838 Tssr85008 1182 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249947843
MGI SNP Detail		 Chr9:49012875 Tssr85008 1145 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs223566189
MGI SNP Detail		 Chr9:49012885 Tssr85008 1135 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242177858
MGI SNP Detail		 Chr9:49012886 Tssr85008 1134 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265724460
MGI SNP Detail		 Chr9:49012926 Tssr85008 1094 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A A G G G G A G G G G G G G G G G G G G G G G G G G
rs231741691
MGI SNP Detail		 Chr9:49012962 Tssr85008 1058 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G G C G G G G C G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs246993336
MGI SNP Detail		 Chr9:49012985 Tssr85008 1035 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs262755814
MGI SNP Detail		 Chr9:49013004 Tssr85008 1016 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C T C C C C
rs225306608
MGI SNP Detail		 Chr9:49013044 Tssr85008 976 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242953251
MGI SNP Detail		 Chr9:49013056 Tssr85008 964 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C T C C C C
rs211940591
MGI SNP Detail		 Chr9:49013058 Tssr85008 962 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T
rs37692281
MGI SNP Detail		 Chr9:49013059 Tssr85008 961 bp upstream
 SNP C/T T T T T T T T T T C C T T T T
rs37648522
MGI SNP Detail		 Chr9:49013075 Tssr85008 945 bp upstream
 SNP A/G G G G G G G A G G G G G G G G
rs253739930
MGI SNP Detail		 Chr9:49013152 Tssr85008 868 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs216935973
MGI SNP Detail		 Chr9:49013173 Tssr85008 847 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs8275143
MGI SNP Detail		 Chr9:49013260 Tssr85008 760 bp upstream
 SNP A/G A A A A A A A A G
rs8275144
MGI SNP Detail		 Chr9:49013266 Tssr85008 754 bp upstream
 SNP A/G G G G G G G G G A
rs8275145
MGI SNP Detail		 Chr9:49013275 Tssr85008 745 bp upstream
 SNP C/T C C C C C C C T
rs8275146
MGI SNP Detail		 Chr9:49013416 Tssr85008 604 bp upstream
 SNP C/T C C C C C C C T
rs36768794
MGI SNP Detail		 Chr9:49013467 Tssr85008 553 bp upstream
 SNP A/T T T T T T T T T A A T T T T
rs36704324
MGI SNP Detail		 Chr9:49013515 Tssr85008 505 bp upstream
 SNP C/T C C C C C C C C C T T C C C C
rs8275147
MGI SNP Detail		 Chr9:49013540 Tssr85008 480 bp upstream
 SNP A/G G G G G G G A
rs8275148
MGI SNP Detail		 Chr9:49013557 Tssr85008 463 bp upstream
 SNP A/T T T T T T T T A
rs8275149
MGI SNP Detail		 Chr9:49013595 Tssr85008 425 bp upstream
 SNP A/T T T T T A T
rs8275150
MGI SNP Detail		 Chr9:49013633 Rr678512 within coordinates of
Tssr85008 387 bp upstream
 SNP C/G C C C C C G
rs8275151
MGI SNP Detail		 Chr9:49013707 Rr678512 within coordinates of
Tssr85008 313 bp upstream
 SNP A/G A A A A A A A G
rs244201910
MGI SNP Detail		 Chr9:49013751 Rr678512 within coordinates of
Tssr85008 269 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C C G G G G C G G G G G G G G G G G G G G C G G G G
rs8275254
MGI SNP Detail		 Chr9:49013884 Rr678512 within coordinates of
Tssr85008 136 bp upstream
 SNP A/G G G G G G G G G G A
rs219321361
MGI SNP Detail		 Chr9:49013994 Rr678512 within coordinates of
Tmprss5 within coordinates of
Tssr85008 26 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs8275255
MGI SNP Detail		 Chr9:49014153 Tmprss5 within coordinates of
Tssr85008 101 bp downstream
 SNP C/T T T T T T T T T T T T T C
rs253766560
MGI SNP Detail		 Chr9:49014164 Tmprss5 within coordinates of
Tssr85008 112 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs8275256
MGI SNP Detail		 Chr9:49014172 Tmprss5 within coordinates of
Tssr85008 120 bp downstream
 SNP C/T T T T T T T T T T T T T C
rs8275257
MGI SNP Detail		 Chr9:49014198 Tmprss5 within coordinates of
Tssr85008 146 bp downstream
 SNP C/T C C C C C C T C C C C C C C
rs8275258
MGI SNP Detail		 Chr9:49014219 Tmprss5 within coordinates of
Tssr85008 167 bp downstream
 SNP C/T T T T T T T T T T T T C T T C T T T T T T T C T
rs8275157
MGI SNP Detail		 Chr9:49014364 Tmprss5 within coordinates of
Tssr85008 312 bp downstream
 SNP A/G A A A A A A A A A A A A G
rs16800592
MGI SNP Detail		 Chr9:49014442 Tmprss5 within coordinates of
Tssr85008 390 bp downstream
 SNP C/T C C C C C C C C C C C T
rs8275156
MGI SNP Detail		 Chr9:49014452 Tmprss5 within coordinates of
Tssr85008 400 bp downstream
 SNP G/T T T T T T T T T T G
rs8275155
MGI SNP Detail		 Chr9:49014604 Tmprss5 within coordinates of
Tssr85008 552 bp downstream
 SNP C/G C C C C C C C C C C G
rs8275153
MGI SNP Detail		 Chr9:49014612 Tmprss5 within coordinates of
Tssr85008 560 bp downstream
 SNP C/G C C C C C C C C C C G
rs579563765
MGI SNP Detail		 Chr9:49014696 Tmprss5 within coordinates of
Tssr85008 644 bp downstream
 SNP C/T T T T T C T T T T T T T T T T T T T T T T T T T T T T
rs586464085
MGI SNP Detail		 Chr9:49014770 Tmprss5 within coordinates of
Tssr85008 718 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs580294789
MGI SNP Detail		 Chr9:49014783 Tmprss5 within coordinates of
Tssr85008 731 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs243898240
MGI SNP Detail		 Chr9:49014926 Tmprss5 within coordinates of
Tssr85008 874 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs583711549
MGI SNP Detail		 Chr9:49015033 Tmprss5 within coordinates of
Tssr85008 981 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T
rs586776966
MGI SNP Detail		 Chr9:49015038 Tmprss5 within coordinates of
Tssr85008 986 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs579918759
MGI SNP Detail		 Chr9:49015043 Tmprss5 within coordinates of
Tssr85008 991 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs583423687
MGI SNP Detail		 Chr9:49015048 Tmprss5 within coordinates of
Tssr85008 996 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs217804364
MGI SNP Detail		 Chr9:49015559 Tmprss5 within coordinates of
Tssr85008 1507 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs235806514
MGI SNP Detail		 Chr9:49015664 Tmprss5 within coordinates of
Tssr85008 1612 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs8275341
MGI SNP Detail		 Chr9:49015700 Tmprss5 within coordinates of
Tssr85008 1648 bp downstream
 SNP A/C C C C C C C C C C C C A
rs8275342
MGI SNP Detail		 Chr9:49015766 Tmprss5 within coordinates of
Tssr85008 1714 bp downstream
 SNP A/C A A A A A A A A A A A C
rs16799454
MGI SNP Detail		 Chr9:49015888 Tmprss5 within coordinates of
Tssr85008 1836 bp downstream
 SNP C/T C C C C C C C C C C C C T
rs16799455
MGI SNP Detail		 Chr9:49015896 Tmprss5 within coordinates of
Tssr85008 1844 bp downstream
 SNP A/C C C C C C C C C C C C C A
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Showing SNP(s) 1 - 72 of 72
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory