About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Tssr85515
transcription start site region 85515
MGI:6013282

<< first < prev1 next > last >>
Showing SNP(s) 1 - 67 of 67

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32824911
MGI SNP Detail
Chr9:61415016 Tssr85515 1979 bp upstream
SNP A/C A A A A A A A A A A C A A A A
rs32824913
MGI SNP Detail
Chr9:61415018 Tssr85515 1977 bp upstream
SNP A/T A A T A A A T A A T A A A A
rs32825635
MGI SNP Detail
Chr9:61415145 Tssr85515 1850 bp upstream
SNP A/G A A A A A A G A A A G A A A A
rs263057460
MGI SNP Detail
Chr9:61415191 Tssr85515 1804 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs32825637
MGI SNP Detail
Chr9:61415289 Tssr85515 1706 bp upstream
SNP A/G A A G A A A G A A G G A A A A
rs32825639
MGI SNP Detail
Chr9:61415485 Tssr85515 1510 bp upstream
SNP C/T T T C T T T T T T C T T T T T
rs32825641
MGI SNP Detail
Chr9:61415544 Tssr85515 1451 bp upstream
SNP A/C A A A A A A C A A A A A A A A
rs226367057
MGI SNP Detail
Chr9:61415607 Tssr85515 1388 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32825643
MGI SNP Detail
Chr9:61415646 Tssr85515 1349 bp upstream
SNP C/T C C C C C C T C C C C C C C C
rs213278980
MGI SNP Detail
Chr9:61415788 Tssr85515 1207 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs32826405
MGI SNP Detail
Chr9:61415865 Tssr85515 1130 bp upstream
SNP A/G G G G G G G G G G A G G G G
rs32826407
MGI SNP Detail
Chr9:61415894 Tssr85515 1101 bp upstream
SNP A/C C C C C C C A C C C C C C C C
rs260325976
MGI SNP Detail
Chr9:61415908 Tssr85515 1087 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215926403
MGI SNP Detail
Chr9:61415915 Tssr85515 1080 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs241368673
MGI SNP Detail
Chr9:61415925 Tssr85515 1070 bp upstream
SNP C/T T T T T C T T T T T T T T T T T T T T C T T C T T T T C C C T T C C T C C T T C C C C C T T T T C T T T C
rs32826409
MGI SNP Detail
Chr9:61415985 Tssr85515 1010 bp upstream
SNP G/T G G T G G G G G G T T G G G G
rs214945732
MGI SNP Detail
Chr9:61415997 Tssr85515 998 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs229817723
MGI SNP Detail
Chr9:61416027 Tssr85515 968 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs250384905
MGI SNP Detail
Chr9:61416112 Tssr85515 883 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs222681591
MGI SNP Detail
Chr9:61416213 Tssr85515 782 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs242451225
MGI SNP Detail
Chr9:61416312 Tssr85515 683 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs262743252
MGI SNP Detail
Chr9:61416345 Tssr85515 650 bp upstream
SNP C/T T T T T C T T T T T T T T T T T T T T C T T C T T T T C C C T T C C T C C T T C C C C C T T T T C T T T C
rs32819644
MGI SNP Detail
Chr9:61416500 Tssr85515 495 bp upstream
SNP C/T T T C T T T T T C T T T T
rs245653019
MGI SNP Detail
Chr9:61416506 Tssr85515 489 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs262672944
MGI SNP Detail
Chr9:61416539 Rr680558 within coordinates of
Tssr85515 456 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs226331632
MGI SNP Detail
Chr9:61416541 Rr680558 within coordinates of
Tssr85515 454 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs236179313
MGI SNP Detail
Chr9:61416598 Rr680558 within coordinates of
Tssr85515 397 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32819646
MGI SNP Detail
Chr9:61416828 Rr680558 within coordinates of
Tssr85515 167 bp upstream
SNP C/T C C T C C C T C C T T C C C C
rs228883011
MGI SNP Detail
Chr9:61416857 Rr680558 within coordinates of
Tssr85515 138 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G
rs32819648
MGI SNP Detail
Chr9:61416873 Rr680558 within coordinates of
Tssr85515 122 bp upstream
SNP C/T T T C T T T C T T C C T T T T
rs586187010
MGI SNP Detail
Chr9:61416913 Rr680558 within coordinates of
Tssr85515 82 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216204045
MGI SNP Detail
Chr9:61416933 Rr680558 within coordinates of
Tssr85515 62 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs232460367
MGI SNP Detail
Chr9:61416972 Cpgi21882 within coordinates of
Rr680558 within coordinates of
Tssr85515 23 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255430843
MGI SNP Detail
Chr9:61417006 Cpgi21882 within coordinates of
Rr680558 within coordinates of
Tssr85515 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs32819650
MGI SNP Detail
Chr9:61417039 Cpgi21882 within coordinates of
Rr680559 within coordinates of
Tssr85515 24 bp downstream
SNP C/T T T C T T T C T T C C T T T T
rs229796514
MGI SNP Detail
Chr9:61417054 Cpgi21882 within coordinates of
Rr680559 within coordinates of
Tssr85515 39 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs250343275
MGI SNP Detail
Chr9:61417083 Cpgi21882 within coordinates of
Rr680559 within coordinates of
Tssr85515 68 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs6290137
MGI SNP Detail
Chr9:61417098 Cpgi21882 within coordinates of
Rr680559 within coordinates of
Tssr85515 83 bp downstream
SNP C/T T T C T T T T C C T T C C T T T T
rs242963432
MGI SNP Detail
Chr9:61417121 Cpgi21882 within coordinates of
Rr680559 within coordinates of
Tssr85515 106 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32819653
MGI SNP Detail
Chr9:61417230 Rr680559 within coordinates of
Tssr85515 215 bp downstream
SNP A/G G G G G G G A G G G G G G G G
rs224737922
MGI SNP Detail
Chr9:61417232 Rr680559 within coordinates of
Tssr85515 217 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs6290822
MGI SNP Detail
Chr9:61417276 Rr680559 within coordinates of
Tssr85515 261 bp downstream
SNP A/G A G
rs32820674
MGI SNP Detail
Chr9:61417392 Rr680559 within coordinates of
Tssr85515 377 bp downstream
SNP A/G G G A G G G G G G A G G G G G
rs32820676
MGI SNP Detail
Chr9:61417395 Rr680559 within coordinates of
Tssr85515 380 bp downstream
SNP C/T C C C C C C T C C C C C C C C
rs6306396
MGI SNP Detail
Chr9:61417771 Rr680559 within coordinates of
Tssr85515 756 bp downstream
SNP A/G G G A G A A G
rs254916956
MGI SNP Detail
Chr9:61418105 Rr680559 within coordinates of
Tssr85515 1090 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs579875009
MGI SNP Detail
Chr9:61418260 Rr680559 within coordinates of
Tssr85515 1245 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G A G G G G G G G G G G G G G G G G G G
rs32820678
MGI SNP Detail
Chr9:61418293 Rr680559 within coordinates of
Tssr85515 1278 bp downstream
SNP C/G C C G C C C C C G C C C C
rs251814159
MGI SNP Detail
Chr9:61418298 Rr680559 within coordinates of
Tssr85515 1283 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32820679
MGI SNP Detail
Chr9:61418469 Rr680559 within coordinates of
Tssr85515 1454 bp downstream
SNP A/G A A G A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs233159662
MGI SNP Detail
Chr9:61418543 Rr680559 within coordinates of
Tssr85515 1528 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs250814238
MGI SNP Detail
Chr9:61418602 Tssr85515 1587 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A G A A A A A A A A A A A A
rs214555032
MGI SNP Detail
Chr9:61418604 Tssr85515 1589 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C T C C C C C C C C C C C C
rs586234817
MGI SNP Detail
Chr9:61418612 Tssr85515 1597 bp downstream
SNP C/T T T T T C T T T T T T T T T T T T T T T T T T T T T T T C T T C T T C C T T C T C C C T T T T T T T T C
rs224424461
MGI SNP Detail
Chr9:61418655 Tssr85515 1640 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C
rs244447654
MGI SNP Detail
Chr9:61418694 Tssr85515 1679 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs216530231
MGI SNP Detail
Chr9:61418726 Tssr85515 1711 bp downstream
SNP A/G A A A A G A A A A A A A A A A A A A A A A A A A A A A A G A A G A A G G A A G A G G G A A A A A A A A G
rs240198625
MGI SNP Detail
Chr9:61418728 Tssr85515 1713 bp downstream
SNP C/T C C C C T C C C C C C C C C C C C C C C C C C C C C C C T C C T C C T T C C T C T T T C C C C C C C C T
rs257189520
MGI SNP Detail
Chr9:61418735 Tssr85515 1720 bp downstream
SNP A/G A A A A G A A A A A A A A A A A A A A G A A G A A A A G G A A G G A G G A A G G G G G A A A A A A A A G
rs32820681
MGI SNP Detail
Chr9:61418796 Tssr85515 1781 bp downstream
SNP C/G G G C G G G G G G C G G G G
rs32820683
MGI SNP Detail
Chr9:61418859 Tssr85515 1844 bp downstream
SNP G/T G G T G G G G T G G G
rs250215282
MGI SNP Detail
Chr9:61418899 Tssr85515 1884 bp downstream
SNP C/T T T T T C T T T T T T T T T T T T T T C T T C T T T T C C T T C C T C C T T C C C C T T T T C T T T T
rs217765412
MGI SNP Detail
Chr9:61418901 Tssr85515 1886 bp downstream
SNP C/T T T T T C T T T T T T T T T T T T T T C T T C T T T T C C T T C C T C C T T C C C C C T T T T C T T T T
rs230473537
MGI SNP Detail
Chr9:61418931 Tssr85515 1916 bp downstream
SNP G/T T T T T G T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T G T G G T T T T T T T T G
rs252467479
MGI SNP Detail
Chr9:61418932 Tssr85515 1917 bp downstream
SNP A/C C C C C A C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C A C C C C C C C C A
rs222159265
MGI SNP Detail
Chr9:61418933 Tssr85515 1918 bp downstream
SNP C/T T T T T C T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T C C T T T T T T T T C
rs248667873
MGI SNP Detail
Chr9:61418934 Tssr85515 1919 bp downstream
SNP C/T C C C C T C C C C C C C C C C C C C C C C C C C C C C C T C C T C C T C C C T T C C C C C C C C T
<< first < prev1 next > last >>
Showing SNP(s) 1 - 67 of 67

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
12/17/2024
MGI 6.24
The Jackson Laboratory

Building initial tooltip...