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Mouse SNP Summary
Symbol
Name
ID
Tssr85624
transcription start site region 85624
MGI:6013391

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Showing SNP(s) 1 - 73 of 73

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs585143877
MGI SNP Detail
Chr9:64696290 Tssr85624 1948 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A A A A G A A A A A A
rs579195213
MGI SNP Detail
Chr9:64696292 Tssr85624 1946 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A A A G A A A A A A
rs245412938
MGI SNP Detail
Chr9:64696306 Tssr85624 1932 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T A T A T T T T T T T T T T T T A T T T T T A T A T T T T
rs213631611
MGI SNP Detail
Chr9:64696316 Tssr85624 1922 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs32854220
MGI SNP Detail
Chr9:64696338 Tssr85624 1900 bp upstream
SNP C/T T T C C T T T C C C
rs258611709
MGI SNP Detail
Chr9:64696360 Tssr85624 1878 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T A A
rs229762490
MGI SNP Detail
Chr9:64696361 Tssr85624 1877 bp upstream
SNP A/T T A
rs239344441
MGI SNP Detail
Chr9:64696545 Tssr85624 1693 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33708631
MGI SNP Detail
Chr9:64696604 Tssr85624 1634 bp upstream
SNP C/T C T C C T C
rs218085166
MGI SNP Detail
Chr9:64696608 Tssr85624 1630 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32854222
MGI SNP Detail
Chr9:64696648 Tssr85624 1590 bp upstream
SNP A/G G G A G G G G G A A A G G G
rs29833860
MGI SNP Detail
Chr9:64696676 Tssr85624 1562 bp upstream
SNP C/T T T C T T T T T C C C T T T
rs582614237
MGI SNP Detail
Chr9:64696890 Rr401455 within coordinates of
Tssr85624 1348 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs29885677
MGI SNP Detail
Chr9:64696903 Rr401455 within coordinates of
Tssr85624 1335 bp upstream
SNP A/T A T T A T
rs387180857
MGI SNP Detail
Chr9:64696989 Rr401455 within coordinates of
Tssr85624 1249 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A A A
rs33742758
MGI SNP Detail
Chr9:64697026 Tssr85624 1212 bp upstream
SNP C/T T C C T C
rs248455075
MGI SNP Detail
Chr9:64697080 Tssr85624 1158 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264594379
MGI SNP Detail
Chr9:64697148 Tssr85624 1090 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs234420028
MGI SNP Detail
Chr9:64697168 Tssr85624 1070 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244509583
MGI SNP Detail
Chr9:64697209 Tssr85624 1029 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G A G G G G G G A G G G G
rs256582112
MGI SNP Detail
Chr9:64697244 Tssr85624 994 bp upstream
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs240477588
MGI SNP Detail
Chr9:64697247 Tssr85624 991 bp upstream
SNP C/G G C
rs245446630
MGI SNP Detail
Chr9:64697249 Tssr85624 989 bp upstream
SNP C/G C C C C C C C C C C C C C G C C C C C C C C C C C C C C C
rs213381831
MGI SNP Detail
Chr9:64697491 Tssr85624 747 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G
rs238355360
MGI SNP Detail
Chr9:64697528 Tssr85624 710 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257259403
MGI SNP Detail
Chr9:64697679 Tssr85624 559 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs219143293
MGI SNP Detail
Chr9:64697711 Tssr85624 527 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257427419
MGI SNP Detail
Chr9:64697836 Tssr85624 402 bp upstream
SNP A/G A G
rs248765799
MGI SNP Detail
Chr9:64697882 Tssr85624 356 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs218118949
MGI SNP Detail
Chr9:64697906 Tssr85624 332 bp upstream
SNP A/C A A A C A A A A A C C C A A A A A A A C A A C A A C A C A C A A C C C A A A A C C C A A C C A C C C A A
rs232319397
MGI SNP Detail
Chr9:64697913 Tssr85624 325 bp upstream
SNP A/T T T T A T T T T T A A A T T T T T T T A T T A T T A T A T A T T A A A T T T T A A A T T A A T T A A T T
rs249872356
MGI SNP Detail
Chr9:64697929 Tssr85624 309 bp upstream
SNP C/T C C C T C C C C C T T T C C C C C C C C C C C C C C C C C T C C C T T C C C C C T T C C T C C C T T C C
rs578712699
MGI SNP Detail
Chr9:64697978 Tssr85624 260 bp upstream
SNP A/G G G G A G G G G G A A A G G G G G G G A G G A G G A G A G A A G G A A A G G G G A A A G G A A G A A A G G
rs225337196
MGI SNP Detail
Chr9:64697997 Tssr85624 241 bp upstream
SNP A/G A A A G A A A A A G G G A A A A A A A G A A G A A G A G A G G A A G G G A A A A G G G A A G G A A G G A A
rs245319351
MGI SNP Detail
Chr9:64698023 Tssr85624 215 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216807851
MGI SNP Detail
Chr9:64698060 Tssr85624 178 bp upstream
SNP C/T T C
rs226152115
MGI SNP Detail
Chr9:64698169 Tssr85624 69 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30472812
MGI SNP Detail
Chr9:64698263 Tssr85624 14 bp downstream
SNP C/T C C T C C T C
rs32855135
MGI SNP Detail
Chr9:64698287 Tssr85624 38 bp downstream
SNP A/G A A G A A G A A G G A
rs108507361
MGI SNP Detail
Chr9:64698295 Tssr85624 46 bp downstream
SNP A/C C A C
rs107710381
MGI SNP Detail
Chr9:64698296 Tssr85624 47 bp downstream
SNP A/T T A T
rs262245347
MGI SNP Detail
Chr9:64698312 Tssr85624 63 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232743895
MGI SNP Detail
Chr9:64698359 Tssr85624 110 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A T A A A A A A A A A A A
rs387041859
MGI SNP Detail
Chr9:64698424 Tssr85624 175 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C G C C C C C C
rs251929878
MGI SNP Detail
Chr9:64698462 Tssr85624 213 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219083061
MGI SNP Detail
Chr9:64698512 Tssr85624 263 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233054625
MGI SNP Detail
Chr9:64698678 Tssr85624 429 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs243038673
MGI SNP Detail
Chr9:64698846 Tssr85624 597 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs211984471
MGI SNP Detail
Chr9:64698859 Tssr85624 610 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs231999153
MGI SNP Detail
Chr9:64698929 Tssr85624 680 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs249907603
MGI SNP Detail
Chr9:64698952 Tssr85624 703 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs579556545
MGI SNP Detail
Chr9:64698961 Tssr85624 712 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581694603
MGI SNP Detail
Chr9:64698972 Tssr85624 723 bp downstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs586492637
MGI SNP Detail
Chr9:64698978 Tssr85624 729 bp downstream
SNP C/T C C C T C C C C C T C C C C C C C C C C C C C C C C C C T T C C C C C T T C C T C C C T
rs32855137
MGI SNP Detail
Chr9:64699043 Tssr85624 794 bp downstream
SNP C/T T T T T T C T T
rs583767130
MGI SNP Detail
Chr9:64699085 Tssr85624 836 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240093645
MGI SNP Detail
Chr9:64699299 Tssr85624 1050 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs260906616
MGI SNP Detail
Chr9:64699326 Tssr85624 1077 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs587328877
MGI SNP Detail
Chr9:64699504 Tssr85624 1255 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579914326
MGI SNP Detail
Chr9:64699539 Tssr85624 1290 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C T C T C C C C C C C C C C C C T C C C C C T C C C C C C
rs226656852
MGI SNP Detail
Chr9:64699564 Tssr85624 1315 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238483852
MGI SNP Detail
Chr9:64699574 Tssr85624 1325 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs250850855
MGI SNP Detail
Chr9:64699785 Tssr85624 1536 bp downstream
SNP C/T C T
rs108589920
MGI SNP Detail
Chr9:64699808 Tssr85624 1559 bp downstream
SNP C/T C T C T C
rs239167261
MGI SNP Detail
Chr9:64699839 Tssr85624 1590 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C G C C C C C C C C C C C C C C G C C C C C G C C C C C C
rs265016847
MGI SNP Detail
Chr9:64699863 Tssr85624 1614 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232152195
MGI SNP Detail
Chr9:64699877 Tssr85624 1628 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247418654
MGI SNP Detail
Chr9:64699881 Tssr85624 1632 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264279402
MGI SNP Detail
Chr9:64699891 Tssr85624 1642 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227993014
MGI SNP Detail
Chr9:64699905 Tssr85624 1656 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231002703
MGI SNP Detail
Chr9:64699999 Tssr85624 1750 bp downstream
SNP A/G G A
rs583324262
MGI SNP Detail
Chr9:64700036 Tssr85624 1787 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs212022998
MGI SNP Detail
Chr9:64700207 Tssr85624 1958 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
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Showing SNP(s) 1 - 73 of 73

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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory

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