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Mouse SNP Summary
Symbol
Name
ID 		Tssr86050
transcription start site region 86050
MGI:6013817

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Showing SNP(s) 1 - 47 of 47

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs256567480
MGI SNP Detail		 Chr9:72712555 Tssr86050 1920 bp upstream
 SNP C/T T C
rs33769843
MGI SNP Detail		 Chr9:72712584 Tssr86050 1891 bp upstream
 SNP A/T T A
rs29598345
MGI SNP Detail		 Chr9:72712589 Tssr86050 1886 bp upstream
 SNP C/T T C
rs579548909
MGI SNP Detail		 Chr9:72712591 Tssr86050 1884 bp upstream
 SNP C C C C C C C C C C C C C C C
rs232980118
MGI SNP Detail		 Chr9:72712723 Tssr86050 1752 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263094317
MGI SNP Detail		 Chr9:72712747 Tssr86050 1728 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A
rs225351051
MGI SNP Detail		 Chr9:72712831 Tssr86050 1644 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250453573
MGI SNP Detail		 Chr9:72712832 Tssr86050 1643 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261104093
MGI SNP Detail		 Chr9:72712980 Tssr86050 1495 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs218244106
MGI SNP Detail		 Chr9:72713211 Tssr86050 1264 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235668925
MGI SNP Detail		 Chr9:72713213 Tssr86050 1262 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs30276048
MGI SNP Detail		 Chr9:72713262 Tssr86050 1213 bp upstream
 SNP A/G A G A A A
rs224893917
MGI SNP Detail		 Chr9:72713305 Tssr86050 1170 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243748926
MGI SNP Detail		 Chr9:72713341 Tssr86050 1134 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265485890
MGI SNP Detail		 Chr9:72713362 Tssr86050 1113 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs232349094
MGI SNP Detail		 Chr9:72713389 Tssr86050 1086 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259221976
MGI SNP Detail		 Chr9:72713649 Rr206710 within coordinates of
Tssr86050 826 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217285068
MGI SNP Detail		 Chr9:72713650 Rr206710 within coordinates of
Tssr86050 825 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33756072
MGI SNP Detail		 Chr9:72713673 Rr206710 within coordinates of
Tssr86050 802 bp upstream
 SNP C/G G G C G C G
rs244422324
MGI SNP Detail		 Chr9:72713681 Rr206710 within coordinates of
Tssr86050 794 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs213833198
MGI SNP Detail		 Chr9:72713736 Rr206710 within coordinates of
Tssr86050 739 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs239039507
MGI SNP Detail		 Chr9:72713850 Rr206710 within coordinates of
Tssr86050 625 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs258719979
MGI SNP Detail		 Chr9:72713862 Rr206710 within coordinates of
Tssr86050 613 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29592085
MGI SNP Detail		 Chr9:72713941 Rr206710 within coordinates of
Tssr86050 534 bp upstream
 SNP A/C A C C C
rs264452339
MGI SNP Detail		 Chr9:72714144 Cpgi22020 within coordinates of
Rr206710 within coordinates of
Tssr86050 331 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs218192857
MGI SNP Detail		 Chr9:72714325 Cpgi22020 within coordinates of
Rr206710 within coordinates of
Tssr86050 150 bp upstream
 SNP C/T T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C
rs236993127
MGI SNP Detail		 Chr9:72714424 Cpgi22020 within coordinates of
Rr206710 within coordinates of
Tssr86048 within coordinates of
Tssr86050 51 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G G
rs33690312
MGI SNP Detail		 Chr9:72714893 Cpgi22020 within coordinates of
Prtg within coordinates of
Rr206710 within coordinates of
Tssr86050 391 bp downstream
 SNP C/T T C T C C C
rs219184709
MGI SNP Detail		 Chr9:72714975 Cpgi22020 within coordinates of
Prtg within coordinates of
Rr206710 within coordinates of
Tssr86050 473 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs246465181
MGI SNP Detail		 Chr9:72715004 Cpgi22020 within coordinates of
Prtg within coordinates of
Rr206710 within coordinates of
Tssr86050 502 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263008962
MGI SNP Detail		 Chr9:72715170 Cpgi22020 within coordinates of
Prtg within coordinates of
Rr206710 within coordinates of
Tssr86050 668 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232754510
MGI SNP Detail		 Chr9:72715300 Prtg within coordinates of
Rr206710 within coordinates of
Tssr86050 798 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G
rs247397704
MGI SNP Detail		 Chr9:72715309 Prtg within coordinates of
Rr206710 within coordinates of
Tssr86050 807 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T G T T T T T T T T T T T T T T G T T T T
rs261277283
MGI SNP Detail		 Chr9:72715314 Prtg within coordinates of
Rr206710 within coordinates of
Tssr86050 812 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs224082065
MGI SNP Detail		 Chr9:72715409 Prtg within coordinates of
Rr206710 within coordinates of
Tssr86050 907 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244179184
MGI SNP Detail		 Chr9:72715431 Prtg within coordinates of
Rr206710 within coordinates of
Tssr86050 929 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs257667100
MGI SNP Detail		 Chr9:72715449 Prtg within coordinates of
Rr206710 within coordinates of
Tssr86050 947 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs231082287
MGI SNP Detail		 Chr9:72715522 Prtg within coordinates of
Rr206710 within coordinates of
Tssr86050 1020 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs257525690
MGI SNP Detail		 Chr9:72715545 Prtg within coordinates of
Rr206710 within coordinates of
Tssr86050 1043 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs216774732
MGI SNP Detail		 Chr9:72715653 Prtg within coordinates of
Rr206710 within coordinates of
Tssr86050 1151 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242227464
MGI SNP Detail		 Chr9:72715784 Prtg within coordinates of
Rr206710 within coordinates of
Tssr86050 1282 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs247765488
MGI SNP Detail		 Chr9:72715874 Prtg within coordinates of
Rr206710 within coordinates of
Tssr86050 1372 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs212482810
MGI SNP Detail		 Chr9:72716106 Prtg within coordinates of
Rr206710 within coordinates of
Tssr86050 1604 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230923530
MGI SNP Detail		 Chr9:72716130 Prtg within coordinates of
Rr206710 within coordinates of
Tssr86050 1628 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G G G G G G G
rs249990797
MGI SNP Detail		 Chr9:72716299 Prtg within coordinates of
Rr206710 within coordinates of
Tssr86050 1797 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223532683
MGI SNP Detail		 Chr9:72716347 Prtg within coordinates of
Rr206710 within coordinates of
Tssr86050 1845 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236764047
MGI SNP Detail		 Chr9:72716478 Prtg within coordinates of
Rr206710 within coordinates of
Tssr86050 1976 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 47 of 47
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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