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Mouse SNP Summary
Symbol
Name
ID 		Tssr86110
transcription start site region 86110
MGI:6013877

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Showing SNP(s) 1 - 44 of 44

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs224255415
MGI SNP Detail		 Chr9:74767195 Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Tssr86110 1975 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs246510351
MGI SNP Detail		 Chr9:74767251 Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Tssr86110 1919 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs583720383
MGI SNP Detail		 Chr9:74767311 Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Tssr86110 1859 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258024225
MGI SNP Detail		 Chr9:74767408 Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Tssr86110 1762 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221927565
MGI SNP Detail		 Chr9:74767437 Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Tssr86110 1733 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241575783
MGI SNP Detail		 Chr9:74767527 Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Tssr86110 1643 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253773278
MGI SNP Detail		 Chr9:74767543 Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Tssr86110 1627 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs228646626
MGI SNP Detail		 Chr9:74767680 Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Tssr86110 1490 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs254925024
MGI SNP Detail		 Chr9:74767737 Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Tssr86110 1433 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs262678477
MGI SNP Detail		 Chr9:74767862 Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Tssr86110 1308 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs231681486
MGI SNP Detail		 Chr9:74767863 Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Tssr86110 1307 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs246970500
MGI SNP Detail		 Chr9:74767897 Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Tssr86110 1273 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216421815
MGI SNP Detail		 Chr9:74768057 Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Tssr86110 1113 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs587530118
MGI SNP Detail		 Chr9:74768338 Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Tssr86110 832 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs236764982
MGI SNP Detail		 Chr9:74768386 Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Tssr86110 784 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs243910260
MGI SNP Detail		 Chr9:74768439 Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Rr206725 within coordinates of
Tssr86110 731 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213554712
MGI SNP Detail		 Chr9:74768472 Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Rr206725 within coordinates of
Tssr86110 698 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs236485052
MGI SNP Detail		 Chr9:74768572 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Rr206725 within coordinates of
Tssr86110 598 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262518703
MGI SNP Detail		 Chr9:74768577 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Rr206725 within coordinates of
Tssr86110 593 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224380831
MGI SNP Detail		 Chr9:74768584 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Rr206725 within coordinates of
Tssr86110 586 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs241355782
MGI SNP Detail		 Chr9:74768638 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Rr206725 within coordinates of
Tssr86110 532 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252677923
MGI SNP Detail		 Chr9:74768662 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Rr206725 within coordinates of
Tssr86110 508 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222800533
MGI SNP Detail		 Chr9:74768668 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Rr206725 within coordinates of
Tssr86110 502 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs241524274
MGI SNP Detail		 Chr9:74768675 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Rr206725 within coordinates of
Tssr86110 495 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253891844
MGI SNP Detail		 Chr9:74768688 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Rr206725 within coordinates of
Tssr86110 482 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs220888323
MGI SNP Detail		 Chr9:74768740 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Rr206725 within coordinates of
Tssr86110 430 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242982601
MGI SNP Detail		 Chr9:74768753 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Rr206725 within coordinates of
Tssr86110 417 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs265214047
MGI SNP Detail		 Chr9:74768763 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Rr206725 within coordinates of
Tssr86110 407 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231442366
MGI SNP Detail		 Chr9:74768794 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Rr206725 within coordinates of
Tssr86110 376 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs241109030
MGI SNP Detail		 Chr9:74768813 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Rr206725 within coordinates of
Tssr86110 357 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs260357093
MGI SNP Detail		 Chr9:74768870 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Rr206725 within coordinates of
Tssr86110 300 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs228952598
MGI SNP Detail		 Chr9:74768935 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Rr206725 within coordinates of
Tssr86110 235 bp upstream
 SNP A/C/T A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A C A A A A A A C A A A A A A A T A A A A
rs252995511
MGI SNP Detail		 Chr9:74769164 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Rr206725 within coordinates of
Tssr86109 within coordinates of
Tssr86110 6 bp upstream
 SNP C/G G C
rs213225386
MGI SNP Detail		 Chr9:74769246 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Onecut1 within coordinates of
Rr206725 within coordinates of
Tssr86110 49 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230490747
MGI SNP Detail		 Chr9:74769335 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Onecut1 within coordinates of
Rr206725 within coordinates of
Tssr86110 138 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251764204
MGI SNP Detail		 Chr9:74769806 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Onecut1 within coordinates of
Rr206725 within coordinates of
Tssr86110 609 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216570574
MGI SNP Detail		 Chr9:74769830 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Onecut1 within coordinates of
Rr206725 within coordinates of
Tssr86110 633 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T C C C C C C T C C C C C C C C C C C
rs233709952
MGI SNP Detail		 Chr9:74770002 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Onecut1 within coordinates of
Rr206725 within coordinates of
Tssr86110 805 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252774954
MGI SNP Detail		 Chr9:74770334 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Gm33562 within coordinates of
Gm68752 within coordinates of
Onecut1 within coordinates of
Rr206725 within coordinates of
Tssr86110 1137 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs585084841
MGI SNP Detail		 Chr9:74770855 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Onecut1 within coordinates of
Rr206725 within coordinates of
Tssr86110 1658 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217347899
MGI SNP Detail		 Chr9:74771044 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Onecut1 within coordinates of
Rr206725 within coordinates of
Tssr86110 1847 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs230085556
MGI SNP Detail		 Chr9:74771088 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Onecut1 within coordinates of
Rr206725 within coordinates of
Tssr86110 1891 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A
rs260833443
MGI SNP Detail		 Chr9:74771138 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Onecut1 within coordinates of
Rr206725 within coordinates of
Tssr86110 1941 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A G A A A A
rs45723003
MGI SNP Detail		 Chr9:74771164 Cpgi22034 within coordinates of
Gm20649 within coordinates of
Onecut1 within coordinates of
Rr206725 within coordinates of
Tssr86110 1967 bp downstream
 SNP A/G G A
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Showing SNP(s) 1 - 44 of 44
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory