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Mouse SNP Summary
Symbol
Name
ID 		Tssr86596
transcription start site region 86596
MGI:6014363

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs252450179
MGI SNP Detail		 Chr9:96139445 Tfdp2 within coordinates of
Tssr86596 1878 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs243241487
MGI SNP Detail		 Chr9:96139465 Tfdp2 within coordinates of
Tssr86596 1858 bp upstream
 SNP A/C A C
rs212098130
MGI SNP Detail		 Chr9:96139477 Tfdp2 within coordinates of
Tssr86596 1846 bp upstream
 SNP A/G A G
rs257716344
MGI SNP Detail		 Chr9:96139499 Tfdp2 within coordinates of
Tssr86596 1824 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46510960
MGI SNP Detail		 Chr9:96139520 Tfdp2 within coordinates of
Tssr86596 1803 bp upstream
 SNP C/T C C C C C C C C C C C T
rs246316689
MGI SNP Detail		 Chr9:96139546 Tfdp2 within coordinates of
Tssr86596 1777 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230961107
MGI SNP Detail		 Chr9:96139603 Tfdp2 within coordinates of
Tssr86596 1720 bp upstream
 SNP C/T T C
rs255393287
MGI SNP Detail		 Chr9:96139636 Tfdp2 within coordinates of
Tssr86596 1687 bp upstream
 SNP A/G A G
rs30354877
MGI SNP Detail		 Chr9:96139790 Tfdp2 within coordinates of
Tssr86596 1533 bp upstream
 SNP C/T T T C T T C
rs241051659
MGI SNP Detail		 Chr9:96139877 Tfdp2 within coordinates of
Tssr86596 1446 bp upstream
 SNP C/T C T
rs227837562
MGI SNP Detail		 Chr9:96139933 Tfdp2 within coordinates of
Tssr86596 1390 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256515097
MGI SNP Detail		 Chr9:96139950 Tfdp2 within coordinates of
Tssr86596 1373 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252656874
MGI SNP Detail		 Chr9:96140006 Tfdp2 within coordinates of
Tssr86596 1317 bp upstream
 SNP A/C A C
rs217307659
MGI SNP Detail		 Chr9:96140021 Tfdp2 within coordinates of
Tssr86596 1302 bp upstream
 SNP A/G A G
rs235310194
MGI SNP Detail		 Chr9:96140034 Tfdp2 within coordinates of
Tssr86596 1289 bp upstream
 SNP G/T G T
rs49266223
MGI SNP Detail		 Chr9:96140074 Tfdp2 within coordinates of
Tssr86596 1249 bp upstream
 SNP G/T G G T
rs217631888
MGI SNP Detail		 Chr9:96140095 Tfdp2 within coordinates of
Tssr86596 1228 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234838302
MGI SNP Detail		 Chr9:96140147 Tfdp2 within coordinates of
Tssr86596 1176 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A T A A A A A A T T A T A A A A A A A T A A A A
rs246435327
MGI SNP Detail		 Chr9:96140149 Tfdp2 within coordinates of
Tssr86596 1174 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T G T T T T T T G G T G T T T T T T T G T T T T
rs212584162
MGI SNP Detail		 Chr9:96140155 Tfdp2 within coordinates of
Tssr86596 1168 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C G C C C C C C G G C G C C C C C C C C C C C C
rs234384093
MGI SNP Detail		 Chr9:96140426 Tfdp2 within coordinates of
Tssr86596 897 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs262330952
MGI SNP Detail		 Chr9:96140602 Tfdp2 within coordinates of
Tssr86596 721 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs33749408
MGI SNP Detail		 Chr9:96140609 Tfdp2 within coordinates of
Tssr86596 714 bp upstream
 SNP A/G A G
rs213613390
MGI SNP Detail		 Chr9:96140625 Tfdp2 within coordinates of
Tssr86596 698 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs240919970
MGI SNP Detail		 Chr9:96140638 Tfdp2 within coordinates of
Tssr86596 685 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250196668
MGI SNP Detail		 Chr9:96140737 Tfdp2 within coordinates of
Tssr86596 586 bp upstream
 SNP C/T C T
rs219872005
MGI SNP Detail		 Chr9:96140765 Tfdp2 within coordinates of
Tssr86596 558 bp upstream
 SNP A/G A G
rs241994862
MGI SNP Detail		 Chr9:96140776 Tfdp2 within coordinates of
Tssr86590 within coordinates of
Tssr86596 547 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51758334
MGI SNP Detail		 Chr9:96140846 Tfdp2 within coordinates of
Tssr86592 within coordinates of
Tssr86596 477 bp upstream
 SNP C/T T T T T T T T T C T C C T T
rs261845904
MGI SNP Detail		 Chr9:96140859 Tfdp2 within coordinates of
Tssr86593 within coordinates of
Tssr86596 464 bp upstream
 SNP C/T C T
rs244275707
MGI SNP Detail		 Chr9:96140875 Tfdp2 within coordinates of
Tssr86593 within coordinates of
Tssr86596 448 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs45798199
MGI SNP Detail		 Chr9:96140877 Tfdp2 within coordinates of
Tssr86593 within coordinates of
Tssr86596 446 bp upstream
 SNP A/G G G A G G G G G G A G A G G
rs232628774
MGI SNP Detail		 Chr9:96140929 Tfdp2 within coordinates of
Tssr86596 394 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239536679
MGI SNP Detail		 Chr9:96141078 Tfdp2 within coordinates of
Tssr86596 245 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260226650
MGI SNP Detail		 Chr9:96141153 Tfdp2 within coordinates of
Tssr86596 170 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228816681
MGI SNP Detail		 Chr9:96141183 Tfdp2 within coordinates of
Tssr86596 140 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243441283
MGI SNP Detail		 Chr9:96141402 Tfdp2 within coordinates of
Tssr86596 72 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs48253636
MGI SNP Detail		 Chr9:96141467 Tfdp2 within coordinates of
Tssr86596 137 bp downstream
 SNP C/T T C C C C C C C C C T C
rs227798335
MGI SNP Detail		 Chr9:96141529 Tfdp2 within coordinates of
Tssr86596 199 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225309583
MGI SNP Detail		 Chr9:96141670 Tfdp2 within coordinates of
Tssr86596 340 bp downstream
 SNP C/T T C
rs213973111
MGI SNP Detail		 Chr9:96141790 Tfdp2 within coordinates of
Tssr86596 460 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs239619659
MGI SNP Detail		 Chr9:96141827 Tfdp2 within coordinates of
Tssr86596 497 bp downstream
 SNP A/G A G
rs252654180
MGI SNP Detail		 Chr9:96141934 Tfdp2 within coordinates of
Tssr86596 604 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217307016
MGI SNP Detail		 Chr9:96141994 Tfdp2 within coordinates of
Tssr86596 664 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30076624
MGI SNP Detail		 Chr9:96142144 Tfdp2 within coordinates of
Tssr86596 814 bp downstream
 SNP C/T C C T C T T T C C T T C C C C
rs579430848
MGI SNP Detail		 Chr9:96142152 Tfdp2 within coordinates of
Tssr86596 822 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C A C C C C C C A A C A C C C C C C C C C C C C
rs250413853
MGI SNP Detail		 Chr9:96142191 Tfdp2 within coordinates of
Tssr86596 861 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220508295
MGI SNP Detail		 Chr9:96142355 Tfdp2 within coordinates of
Tssr86596 1025 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247010136
MGI SNP Detail		 Chr9:96142356 Tfdp2 within coordinates of
Tssr86596 1026 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A G A A
rs257238305
MGI SNP Detail		 Chr9:96142366 Tfdp2 within coordinates of
Tssr86596 1036 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs260104413
MGI SNP Detail		 Chr9:96142385 Tfdp2 within coordinates of
Tssr86596 1055 bp downstream
 SNP A/G A G
rs239430228
MGI SNP Detail		 Chr9:96142397 Tfdp2 within coordinates of
Tssr86596 1067 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260116229
MGI SNP Detail		 Chr9:96142406 Tfdp2 within coordinates of
Tssr86596 1076 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs228751067
MGI SNP Detail		 Chr9:96142426 Tfdp2 within coordinates of
Tssr86596 1096 bp downstream
 SNP A/G G A
rs237019711
MGI SNP Detail		 Chr9:96142429 Tfdp2 within coordinates of
Tssr86596 1099 bp downstream
 SNP A/T A T
rs254044355
MGI SNP Detail		 Chr9:96142541 Tfdp2 within coordinates of
Tssr86596 1211 bp downstream
 SNP A/C C A
rs227250717
MGI SNP Detail		 Chr9:96142547 Tfdp2 within coordinates of
Tssr86596 1217 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs231424426
MGI SNP Detail		 Chr9:96142593 Tfdp2 within coordinates of
Tssr86596 1263 bp downstream
 SNP C/T C T
rs48152223
MGI SNP Detail		 Chr9:96142717 Tfdp2 within coordinates of
Tssr86596 1387 bp downstream
 SNP A/G A A A A A A A G A A
rs217276495
MGI SNP Detail		 Chr9:96142745 Tfdp2 within coordinates of
Tssr86596 1415 bp downstream
 SNP C/G G C
rs232317104
MGI SNP Detail		 Chr9:96142758 Tfdp2 within coordinates of
Tssr86596 1428 bp downstream
 SNP G/T G T
rs217253437
MGI SNP Detail		 Chr9:96142798 Tfdp2 within coordinates of
Tssr86596 1468 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48599336
MGI SNP Detail		 Chr9:96142803 Tfdp2 within coordinates of
Tssr86596 1473 bp downstream
 SNP G G G G
rs235466030
MGI SNP Detail		 Chr9:96142834 Tfdp2 within coordinates of
Tssr86596 1504 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs246445807
MGI SNP Detail		 Chr9:96142873 Tfdp2 within coordinates of
Tssr86596 1543 bp downstream
 SNP A/G A G
rs217438688
MGI SNP Detail		 Chr9:96142933 Tfdp2 within coordinates of
Tssr86596 1603 bp downstream
 SNP C/G G C
rs237052131
MGI SNP Detail		 Chr9:96142982 Tfdp2 within coordinates of
Tssr86596 1652 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29840110
MGI SNP Detail		 Chr9:96142998 Tfdp2 within coordinates of
Tssr86596 1668 bp downstream
 SNP C/T C C T C T T T T C C C C
rs225066396
MGI SNP Detail		 Chr9:96143001 Tfdp2 within coordinates of
Tssr86596 1671 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232977961
MGI SNP Detail		 Chr9:96143005 Tfdp2 within coordinates of
Tssr86596 1675 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235422178
MGI SNP Detail		 Chr9:96143050 Tfdp2 within coordinates of
Tssr86596 1720 bp downstream
 SNP C/T T C
rs250339193
MGI SNP Detail		 Chr9:96143107 Tfdp2 within coordinates of
Tssr86596 1777 bp downstream
 SNP A/G A G
rs237006130
MGI SNP Detail		 Chr9:96143108 Tfdp2 within coordinates of
Tssr86596 1778 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261717129
MGI SNP Detail		 Chr9:96143144 Tfdp2 within coordinates of
Tssr86596 1814 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs211820968
MGI SNP Detail		 Chr9:96143148 Tfdp2 within coordinates of
Tssr86596 1818 bp downstream
 SNP G/T G T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243633982
MGI SNP Detail		 Chr9:96143195 Tfdp2 within coordinates of
Tssr86596 1865 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238849881
MGI SNP Detail		 Chr9:96143226 Tfdp2 within coordinates of
Tssr86596 1896 bp downstream
 SNP A/G A G
rs256734296
MGI SNP Detail		 Chr9:96143302 Tfdp2 within coordinates of
Tssr86596 1972 bp downstream
 SNP C/T C T
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Showing SNP(s) 1 - 78 of 78
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
Building initial tooltip...