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Mouse SNP Summary
Symbol
Name
ID 		Tssr87530
transcription start site region 87530
MGI:6015297

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Showing SNP(s) 1 - 64 of 64

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs47359754
MGI SNP Detail		 Chr9:113619862 Clasp2 within coordinates of
Tssr87530 1941 bp upstream
 SNP A/G A A A A A A A A G A A G
rs238542268
MGI SNP Detail		 Chr9:113619888 Clasp2 within coordinates of
Tssr87530 1915 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256700278
MGI SNP Detail		 Chr9:113619890 Clasp2 within coordinates of
Tssr87530 1913 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs220189689
MGI SNP Detail		 Chr9:113619957 Clasp2 within coordinates of
Tssr87530 1846 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs248463756
MGI SNP Detail		 Chr9:113620111 Clasp2 within coordinates of
Tssr87530 1692 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs254556080
MGI SNP Detail		 Chr9:113620214 Clasp2 within coordinates of
Tssr87530 1589 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs51214307
MGI SNP Detail		 Chr9:113620222 Clasp2 within coordinates of
Tssr87530 1581 bp upstream
 SNP C/T C C C C C C C C C T C C T
rs241127494
MGI SNP Detail		 Chr9:113620245 Clasp2 within coordinates of
Tssr87530 1558 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49866835
MGI SNP Detail		 Chr9:113620256 Clasp2 within coordinates of
Tssr87530 1547 bp upstream
 SNP C/T T T T T T T T T T C T T C
rs226468649
MGI SNP Detail		 Chr9:113620360 Clasp2 within coordinates of
Tssr87530 1443 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245916401
MGI SNP Detail		 Chr9:113620652 Clasp2 within coordinates of
Tssr87530 1151 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs29644016
MGI SNP Detail		 Chr9:113620724 Clasp2 within coordinates of
Tssr87530 1079 bp upstream
 SNP C/T T T T T T T C C T T T C C T
rs227681269
MGI SNP Detail		 Chr9:113620739 Clasp2 within coordinates of
Tssr87530 1064 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A T A A A T A A A A A A T A A A A A A A T A A A A
rs254396489
MGI SNP Detail		 Chr9:113620827 Clasp2 within coordinates of
Tssr87530 976 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs216428042
MGI SNP Detail		 Chr9:113620841 Clasp2 within coordinates of
Tssr87530 962 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs33660686
MGI SNP Detail		 Chr9:113620847 Clasp2 within coordinates of
Tssr87530 956 bp upstream
 SNP C/T C T C C C
rs245089666
MGI SNP Detail		 Chr9:113620852 Clasp2 within coordinates of
Tssr87530 951 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214656851
MGI SNP Detail		 Chr9:113620867 Clasp2 within coordinates of
Tssr87530 936 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs236501442
MGI SNP Detail		 Chr9:113620919 Clasp2 within coordinates of
Tssr87530 884 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs261766694
MGI SNP Detail		 Chr9:113620948 Clasp2 within coordinates of
Tssr87530 855 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212400232
MGI SNP Detail		 Chr9:113621243 Clasp2 within coordinates of
Tssr87530 560 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs243096138
MGI SNP Detail		 Chr9:113621262 Clasp2 within coordinates of
Tssr87530 541 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254511651
MGI SNP Detail		 Chr9:113621314 Clasp2 within coordinates of
Tssr87530 489 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222023867
MGI SNP Detail		 Chr9:113621347 Clasp2 within coordinates of
Tssr87530 456 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240673482
MGI SNP Detail		 Chr9:113621360 Clasp2 within coordinates of
Tssr87530 443 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs252257963
MGI SNP Detail		 Chr9:113621396 Clasp2 within coordinates of
Tssr87530 407 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222988427
MGI SNP Detail		 Chr9:113621421 Clasp2 within coordinates of
Tssr87530 382 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs582707470
MGI SNP Detail		 Chr9:113621461 Clasp2 within coordinates of
Tssr87530 342 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs242976904
MGI SNP Detail		 Chr9:113621532 Clasp2 within coordinates of
Tssr87530 271 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs264843916
MGI SNP Detail		 Chr9:113621572 Clasp2 within coordinates of
Tssr87530 231 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227618342
MGI SNP Detail		 Chr9:113621575 Clasp2 within coordinates of
Tssr87530 228 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs241227173
MGI SNP Detail		 Chr9:113621584 Clasp2 within coordinates of
Tssr87530 219 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T C T T T C T T T T T T C T T T T T T T C T T C C
rs258587396
MGI SNP Detail		 Chr9:113621624 Clasp2 within coordinates of
Tssr87530 179 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A G A A A G A A A A A A G A A A A A A A G A A A A
rs227303414
MGI SNP Detail		 Chr9:113621642 Clasp2 within coordinates of
Tssr87530 161 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs245055541
MGI SNP Detail		 Chr9:113621664 Clasp2 within coordinates of
Tssr87530 139 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A
rs48198148
MGI SNP Detail		 Chr9:113621670 Clasp2 within coordinates of
Tssr87530 133 bp upstream
 SNP C/T T T T T T T T T C C T C
rs230488733
MGI SNP Detail		 Chr9:113621731 Clasp2 within coordinates of
Tssr87530 72 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30222189
MGI SNP Detail		 Chr9:113621849 Clasp2 within coordinates of
Tssr87530 29 bp downstream
 SNP C/T C C T C C C
rs212675700
MGI SNP Detail		 Chr9:113621877 Clasp2 within coordinates of
Tssr87530 57 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs48516472
MGI SNP Detail		 Chr9:113621926 Clasp2 within coordinates of
Tssr87530 106 bp downstream
 SNP A/G G G G G G G G G G A G G A
rs254859100
MGI SNP Detail		 Chr9:113622260 Clasp2 within coordinates of
Tssr87530 440 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs50997733
MGI SNP Detail		 Chr9:113622270 Clasp2 within coordinates of
Tssr87530 450 bp downstream
 SNP A/G A A A A A A A A G A G
rs48071426
MGI SNP Detail		 Chr9:113622411 Clasp2 within coordinates of
Tssr87530 591 bp downstream
 SNP C/T C C C C C C C T C T
rs252219774
MGI SNP Detail		 Chr9:113622514 Clasp2 within coordinates of
Tssr87530 694 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222748812
MGI SNP Detail		 Chr9:113622683 Clasp2 within coordinates of
Tssr87530 863 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs237855432
MGI SNP Detail		 Chr9:113622684 Clasp2 within coordinates of
Tssr87530 864 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs256168779
MGI SNP Detail		 Chr9:113622697 Clasp2 within coordinates of
Tssr87530 877 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219975120
MGI SNP Detail		 Chr9:113622719 Clasp2 within coordinates of
Tssr87530 899 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs49334505
MGI SNP Detail		 Chr9:113622724 Clasp2 within coordinates of
Tssr87530 904 bp downstream
 SNP A/G A A A A A A A A G A A G
rs259023524
MGI SNP Detail		 Chr9:113622735 Clasp2 within coordinates of
Tssr87530 915 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221170773
MGI SNP Detail		 Chr9:113622752 Clasp2 within coordinates of
Tssr87530 932 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs238869878
MGI SNP Detail		 Chr9:113622813 Clasp2 within coordinates of
Tssr87530 993 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265214146
MGI SNP Detail		 Chr9:113622820 Clasp2 within coordinates of
Tssr87530 1000 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs229618572
MGI SNP Detail		 Chr9:113622830 Clasp2 within coordinates of
Tssr87530 1010 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs254499324
MGI SNP Detail		 Chr9:113622839 Clasp2 within coordinates of
Tssr87530 1019 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261668554
MGI SNP Detail		 Chr9:113622875 Clasp2 within coordinates of
Tssr87530 1055 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs229505424
MGI SNP Detail		 Chr9:113623014 Clasp2 within coordinates of
Tssr87530 1194 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs248369680
MGI SNP Detail		 Chr9:113623068 Clasp2 within coordinates of
Tssr87530 1248 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216333206
MGI SNP Detail		 Chr9:113623085 Clasp2 within coordinates of
Tssr87530 1265 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs29702581
MGI SNP Detail		 Chr9:113623253 Clasp2 within coordinates of
Tssr87530 1433 bp downstream
 SNP A/G A A G A A A
rs245808161
MGI SNP Detail		 Chr9:113623282 Clasp2 within coordinates of
Tssr87530 1462 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214370593
MGI SNP Detail		 Chr9:113623401 Clasp2 within coordinates of
Tssr87530 1581 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48932040
MGI SNP Detail		 Chr9:113623635 Clasp2 within coordinates of
Tssr87530 1815 bp downstream
 SNP A/T A A A A A A T A T
rs261061827
MGI SNP Detail		 Chr9:113623653 Clasp2 within coordinates of
Tssr87530 1833 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
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Showing SNP(s) 1 - 64 of 64
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory