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Mouse SNP Summary
Symbol
Name
ID 		Tssr89081
transcription start site region 89081
MGI:6016848

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Showing SNP(s) 1 - 47 of 47

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259036623
MGI SNP Detail		 Chr9:43016433 Arhgef12 within coordinates of
Cpgi21624 within coordinates of
Tssr89081 1964 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229293944
MGI SNP Detail		 Chr9:43017008 Arhgef12 within coordinates of
Cpgi21624 within coordinates of
Tssr89081 1389 bp downstream
 SNP C/G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs236301193
MGI SNP Detail		 Chr9:43017013 Arhgef12 within coordinates of
Cpgi21624 within coordinates of
Tssr89081 1384 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs262144542
MGI SNP Detail		 Chr9:43017310 Cpgi21624 within coordinates of
Tssr89076 within coordinates of
Tssr89081 1087 bp downstream
 SNP A/G A A A G G A A A G A G G G G G G G A G G A A G G G A A A A G A G A A G G G A G G A G A G G G A G
rs230577750
MGI SNP Detail		 Chr9:43017352 Cpgi21624 within coordinates of
Tssr89077 within coordinates of
Tssr89081 1045 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251747548
MGI SNP Detail		 Chr9:43017437 Cpgi21624 within coordinates of
Tssr89081 960 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs215918598
MGI SNP Detail		 Chr9:43017592 Cpgi21624 within coordinates of
Tssr89081 805 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs227873138
MGI SNP Detail		 Chr9:43017611 Cpgi21624 within coordinates of
Tssr89081 786 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs247700870
MGI SNP Detail		 Chr9:43017612 Cpgi21624 within coordinates of
Tssr89081 785 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217146457
MGI SNP Detail		 Chr9:43017634 Cpgi21624 within coordinates of
Tssr89081 763 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs229646179
MGI SNP Detail		 Chr9:43017664 Cpgi21624 within coordinates of
Tssr89081 733 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs261550791
MGI SNP Detail		 Chr9:43017787 Cpgi21624 within coordinates of
Tssr89081 610 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G T G G G G G G T G G G G G G G G G G G G
rs213697889
MGI SNP Detail		 Chr9:43017807 Cpgi21624 within coordinates of
Tssr89081 590 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs30425217
MGI SNP Detail		 Chr9:43017832 Cpgi21624 within coordinates of
Tssr89081 565 bp downstream
 SNP C/T T T C T T C
rs258484685
MGI SNP Detail		 Chr9:43017888 Cpgi21624 within coordinates of
Tssr89081 509 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220916806
MGI SNP Detail		 Chr9:43017896 Cpgi21624 within coordinates of
Tssr89081 501 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A C A A A A A A C A A A A A A C A A A A
rs240251587
MGI SNP Detail		 Chr9:43017926 Cpgi21624 within coordinates of
Tssr89081 471 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252743115
MGI SNP Detail		 Chr9:43017933 Cpgi21624 within coordinates of
Tssr89081 464 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222807501
MGI SNP Detail		 Chr9:43017940 Cpgi21624 within coordinates of
Tssr89081 457 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs241255929
MGI SNP Detail		 Chr9:43018109 Tssr89081 288 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs264965383
MGI SNP Detail		 Chr9:43018112 Tssr89081 285 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs230429847
MGI SNP Detail		 Chr9:43018151 Tssr89081 246 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247204923
MGI SNP Detail		 Chr9:43018498 Tssr89081 94 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs263292058
MGI SNP Detail		 Chr9:43018567 Tssr89081 163 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs228251054
MGI SNP Detail		 Chr9:43018572 Tssr89081 168 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs247816810
MGI SNP Detail		 Chr9:43018860 Tssr89081 456 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs217183272
MGI SNP Detail		 Chr9:43018998 Tssr89081 594 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs223932268
MGI SNP Detail		 Chr9:43019115 Tssr89081 711 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs249535044
MGI SNP Detail		 Chr9:43019117 Tssr89081 713 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs214184736
MGI SNP Detail		 Chr9:43019186 Tssr89081 782 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs236923969
MGI SNP Detail		 Chr9:43019206 Tssr89081 802 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs262885350
MGI SNP Detail		 Chr9:43019269 Tssr89081 865 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215846614
MGI SNP Detail		 Chr9:43019363 Tssr89081 959 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs33647453
MGI SNP Detail		 Chr9:43019433 Tssr89081 1029 bp upstream
 SNP A/G A A G A A A
rs29841018
MGI SNP Detail		 Chr9:43019567 Tssr89081 1163 bp upstream
 SNP A/G G G A G G G
rs222847088
MGI SNP Detail		 Chr9:43019612 Tssr89081 1208 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244136109
MGI SNP Detail		 Chr9:43019622 Tssr89081 1218 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs256312388
MGI SNP Detail		 Chr9:43019844 Tssr89081 1440 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222633129
MGI SNP Detail		 Chr9:43019881 Tssr89081 1477 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs244688170
MGI SNP Detail		 Chr9:43019915 Tssr89081 1511 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs259484601
MGI SNP Detail		 Chr9:43019927 Tssr89081 1523 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222161891
MGI SNP Detail		 Chr9:43019934 Tssr89081 1530 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs242237605
MGI SNP Detail		 Chr9:43019935 Tssr89081 1531 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261105244
MGI SNP Detail		 Chr9:43020161 Tlcd5 within coordinates of
Tssr89081 1757 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs227361589
MGI SNP Detail		 Chr9:43020184 Tlcd5 within coordinates of
Tssr89081 1780 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs253585681
MGI SNP Detail		 Chr9:43020246 Tlcd5 within coordinates of
Tssr89081 1842 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs262226782
MGI SNP Detail		 Chr9:43020311 Tlcd5 within coordinates of
Tssr89081 1907 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 47 of 47
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory