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Mouse SNP Summary
Symbol
Name
ID 		Tssr89113
transcription start site region 89113
MGI:6016880

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs47837011
MGI SNP Detail		 Chr9:44054015 Mcam within coordinates of
Tssr89113 1995 bp downstream
 SNP C/T C C C T C
rs249474484
MGI SNP Detail		 Chr9:44054062 Tssr89113 1948 bp downstream
 SNP A/G G A
rs32595060
MGI SNP Detail		 Chr9:44054070 Tssr89113 1940 bp downstream
 SNP C/T C T C C C C C T C C C T C C T C
rs107782760
MGI SNP Detail		 Chr9:44054109 Tssr89113 1901 bp downstream
 SNP A/C C A A
rs32595062
MGI SNP Detail		 Chr9:44054112 Tssr89113 1898 bp downstream
 SNP A/T T A T T T T T T T T A T T T
rs108376783
MGI SNP Detail		 Chr9:44054126 Tssr89113 1884 bp downstream
 SNP C/T C T T
rs32595634
MGI SNP Detail		 Chr9:44054169 Tssr89113 1841 bp downstream
 SNP C/T C C C C C C C C C T C C T C
rs217535034
MGI SNP Detail		 Chr9:44054186 Tssr89113 1824 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242823529
MGI SNP Detail		 Chr9:44054212 Tssr89113 1798 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32595636
MGI SNP Detail		 Chr9:44054213 Tssr89113 1797 bp downstream
 SNP C/G G G G G G C G G G C G G C G
rs212608724
MGI SNP Detail		 Chr9:44054216 Tssr89113 1794 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585110306
MGI SNP Detail		 Chr9:44054228 Tssr89113 1782 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs46061361
MGI SNP Detail		 Chr9:44054231 Tssr89113 1779 bp downstream
 SNP C/G G C C
rs587238890
MGI SNP Detail		 Chr9:44054249 Tssr89113 1761 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs49819754
MGI SNP Detail		 Chr9:44054252 Tssr89113 1758 bp downstream
 SNP C/T T C C
rs220668873
MGI SNP Detail		 Chr9:44054260 Tssr89113 1750 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs581239050
MGI SNP Detail		 Chr9:44054290 Cbl within coordinates of
Tssr89113 1720 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs32595638
MGI SNP Detail		 Chr9:44054426 Cbl within coordinates of
Tssr89113 1584 bp downstream
 SNP C/T T T T T T T C T T T C T T C T
rs32594964
MGI SNP Detail		 Chr9:44054657 Cbl within coordinates of
Tssr89113 1353 bp downstream
 SNP C/T C T C C C C C C C C C T C C T C
rs50574483
MGI SNP Detail		 Chr9:44054787 Cbl within coordinates of
Tssr89113 1223 bp downstream
 SNP A/G G A A
rs51151484
MGI SNP Detail		 Chr9:44054788 Cbl within coordinates of
Tssr89113 1222 bp downstream
 SNP A/G A G G
rs47521416
MGI SNP Detail		 Chr9:44054851 Cbl within coordinates of
Tssr89113 1159 bp downstream
 SNP A/G A G G
rs30374003
MGI SNP Detail		 Chr9:44054854 Cbl within coordinates of
Tssr89113 1156 bp downstream
 SNP C/T C C T C C C
rs585048424
MGI SNP Detail		 Chr9:44055026 Cbl within coordinates of
Tssr89113 984 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33737212
MGI SNP Detail		 Chr9:44055027 Cbl within coordinates of
Tssr89113 983 bp downstream
 SNP A/G G A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30132958
MGI SNP Detail		 Chr9:44055033 Cbl within coordinates of
Tssr89113 977 bp downstream
 SNP C/T C T T T
rs579049067
MGI SNP Detail		 Chr9:44055035 Cbl within coordinates of
Tssr89113 975 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs582166931
MGI SNP Detail		 Chr9:44055039 Cbl within coordinates of
Tssr89113 971 bp downstream
 SNP A/G G G G A A A A A A A A A A A A A A A A G A A G A A A A G A A A G A G A A A A A A G A A A A A A A G A A A A
rs584664014
MGI SNP Detail		 Chr9:44055065 Cbl within coordinates of
Tssr89113 945 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578300286
MGI SNP Detail		 Chr9:44055207 Cbl within coordinates of
Tssr89113 803 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs256153916
MGI SNP Detail		 Chr9:44055521 Cbl within coordinates of
Rr677565 within coordinates of
Tssr89113 489 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
rs48809826
MGI SNP Detail		 Chr9:44055525 Cbl within coordinates of
Rr677565 within coordinates of
Tssr89113 485 bp downstream
 SNP C/G G G C C C C C C C C C C C C C C C C C C G C C C C C C G C G C C C C C C G C C C C C C C C C C C
rs585388539
MGI SNP Detail		 Chr9:44055547 Cbl within coordinates of
Rr677565 within coordinates of
Tssr89113 463 bp downstream
 SNP C/T T T C C C C C C C C C C C C C C C C C C T C C C C C C T C C C C C C C T C C C C C C C C C C C
rs245935877
MGI SNP Detail		 Chr9:44055564 Cbl within coordinates of
Rr677565 within coordinates of
Tssr89113 446 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T
rs586326901
MGI SNP Detail		 Chr9:44055593 Cbl within coordinates of
Rr677565 within coordinates of
Tssr89113 417 bp downstream
 SNP C/G G C C C C C C C C C C C G C C G C C C C C C C C C C C C C
rs580463796
MGI SNP Detail		 Chr9:44055619 Cbl within coordinates of
Tssr89113 391 bp downstream
 SNP G G G G G G G G G G G G
rs582451939
MGI SNP Detail		 Chr9:44055650 Cbl within coordinates of
Tssr89113 360 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs585988172
MGI SNP Detail		 Chr9:44055654 Cbl within coordinates of
Tssr89113 356 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs217755084
MGI SNP Detail		 Chr9:44055746 Cbl within coordinates of
Rr677566 within coordinates of
Tssr89113 264 bp downstream
 SNP A/C/T T C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C A C C C C
rs233527476
MGI SNP Detail		 Chr9:44055771 Cbl within coordinates of
Rr677566 within coordinates of
Tssr89113 239 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs252226111
MGI SNP Detail		 Chr9:44055880 Cbl within coordinates of
Rr677566 within coordinates of
Tssr89113 130 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212551927
MGI SNP Detail		 Chr9:44055895 Cbl within coordinates of
Rr677566 within coordinates of
Tssr89113 115 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32594966
MGI SNP Detail		 Chr9:44055911 Cbl within coordinates of
Rr677566 within coordinates of
Tssr89113 99 bp downstream
 SNP C/T T T T T T T T T T C T T C T
rs251509439
MGI SNP Detail		 Chr9:44055994 Cbl within coordinates of
Tssr89113 16 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214641903
MGI SNP Detail		 Chr9:44056036 Cbl within coordinates of
Tssr89113 6 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs583324638
MGI SNP Detail		 Chr9:44056054 Cbl within coordinates of
Tssr89113 24 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32594968
MGI SNP Detail		 Chr9:44056110 Cbl within coordinates of
Tssr89113 80 bp upstream
 SNP A/G G G G G G G G G G G A G G A G
rs32594970
MGI SNP Detail		 Chr9:44056131 Cbl within coordinates of
Tssr89113 101 bp upstream
 SNP C/T T T T T T T T T T C T T C T
rs229663605
MGI SNP Detail		 Chr9:44056278 Cbl within coordinates of
Tssr89113 248 bp upstream
 SNP C/T T C
rs248610787
MGI SNP Detail		 Chr9:44056332 Cbl within coordinates of
Tssr89113 302 bp upstream
 SNP C/T T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32594972
MGI SNP Detail		 Chr9:44056346 Cbl within coordinates of
Tssr89113 316 bp upstream
 SNP A/C C C C C C C C C C C A C C A C
rs32595554
MGI SNP Detail		 Chr9:44056407 Cbl within coordinates of
Tssr89113 377 bp upstream
 SNP C/T C C C C C C T C C C C T C C T T C
rs32595556
MGI SNP Detail		 Chr9:44056506 Cbl within coordinates of
Tssr89113 476 bp upstream
 SNP A/G A A A A A A G A A A G A A G A
rs587046373
MGI SNP Detail		 Chr9:44056628 Cbl within coordinates of
Tssr89113 598 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs52335700
MGI SNP Detail		 Chr9:44056679 Cbl within coordinates of
Tssr89113 649 bp upstream
 SNP C C
rs29889970
MGI SNP Detail		 Chr9:44056926 Cbl within coordinates of
Tssr89113 896 bp upstream
 SNP A/G ? A A A A A A A A A G A A G A
rs579574302
MGI SNP Detail		 Chr9:44056965 Cbl within coordinates of
Tssr89113 935 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs32595559
MGI SNP Detail		 Chr9:44056968 Cbl within coordinates of
Tssr89113 938 bp upstream
 SNP A/G A G G G G G A G G G A G G A G
rs30191736
MGI SNP Detail		 Chr9:44056985 Cbl within coordinates of
Tssr89113 955 bp upstream
 SNP A/G ? G G G G G G G G G G A G G A G
rs582989372
MGI SNP Detail		 Chr9:44057017 Cbl within coordinates of
Tssr89113 987 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs32595562
MGI SNP Detail		 Chr9:44057097 Cbl within coordinates of
Tssr89113 1067 bp upstream
 SNP C/G G C G G G G G C G G G C G G C G
rs32596424
MGI SNP Detail		 Chr9:44057154 Cbl within coordinates of
Tssr89113 1124 bp upstream
 SNP C/T C C C C C C T C C C T C C T C
rs263992816
MGI SNP Detail		 Chr9:44057177 Cbl within coordinates of
Tssr89113 1147 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234596362
MGI SNP Detail		 Chr9:44057249 Cbl within coordinates of
Tssr89113 1219 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs587423657
MGI SNP Detail		 Chr9:44057342 Cbl within coordinates of
Tssr89113 1312 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248900567
MGI SNP Detail		 Chr9:44057368 Cbl within coordinates of
Tssr89113 1338 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46838567
MGI SNP Detail		 Chr9:44057412 Cbl within coordinates of
Tssr89113 1382 bp upstream
 SNP C/T C C C T T T T T T T T T T T T T T T T C T T C T T T T C T T T C T C T T T T T T C T T T T T T T C T T T T
rs225563377
MGI SNP Detail		 Chr9:44057427 Cbl within coordinates of
Tssr89113 1397 bp upstream
 SNP C/T C C C T T T T T T T T T T T T T T T T T T T C T T T T C T C T C T C T T T T T T T T T T T T T T T T T T
rs32596426
MGI SNP Detail		 Chr9:44057473 Cbl within coordinates of
Tssr89113 1443 bp upstream
 SNP C/T C T T T T T T T T C T T C T
rs258735576
MGI SNP Detail		 Chr9:44057484 Cbl within coordinates of
Tssr89113 1454 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs218519819
MGI SNP Detail		 Chr9:44057522 Cbl within coordinates of
Tssr89113 1492 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs581399763
MGI SNP Detail		 Chr9:44057554 Cbl within coordinates of
Tssr89113 1524 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs243489918
MGI SNP Detail		 Chr9:44057555 Cbl within coordinates of
Tssr89113 1525 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32596428
MGI SNP Detail		 Chr9:44057577 Cbl within coordinates of
Tssr89113 1547 bp upstream
 SNP A/G G G G G G G G G G G A G G A G
rs32596430
MGI SNP Detail		 Chr9:44057586 Cbl within coordinates of
Tssr89113 1556 bp upstream
 SNP G/T G G G G T G G G G T T G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231601466
MGI SNP Detail		 Chr9:44057643 Cbl within coordinates of
Tssr89113 1613 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32596432
MGI SNP Detail		 Chr9:44057779 Cbl within coordinates of
Tssr89113 1749 bp upstream
 SNP C/T T T T T T T C T T T T C T T C C T
rs220662556
MGI SNP Detail		 Chr9:44057946 Cbl within coordinates of
Tssr89113 1916 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32597054
MGI SNP Detail		 Chr9:44057961 Cbl within coordinates of
Tssr89113 1931 bp upstream
 SNP C/T T C T T T T T T T T C T T C T
rs265920010
MGI SNP Detail		 Chr9:44057989 Cbl within coordinates of
Tssr89113 1959 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 80 of 80
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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MGI 6.24 		The Jackson Laboratory