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Mouse SNP Summary
Symbol
Name
ID 		Tssr89753
transcription start site region 89753
MGI:6017520

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Showing SNP(s) 1 - 44 of 44

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250725001
MGI SNP Detail		 Chr9:56977244 Gm10658 within coordinates of
Tssr89753 1919 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223037914
MGI SNP Detail		 Chr9:56977420 Gm10658 within coordinates of
Tssr89753 1743 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G C C G G G G G G C G G G G G G C G G G G
rs32794824
MGI SNP Detail		 Chr9:56977502 Gm10658 within coordinates of
Tssr89753 1661 bp downstream
 SNP C/G G G G G G G G G G C G G G
rs263208608
MGI SNP Detail		 Chr9:56977627 Gm10658 within coordinates of
Tssr89753 1536 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs233228458
MGI SNP Detail		 Chr9:56977664 Gm10658 within coordinates of
Tssr89753 1499 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32794826
MGI SNP Detail		 Chr9:56977903 Gm10658 within coordinates of
Tssr89753 1260 bp downstream
 SNP C/T C C C C C C C C C T C C C C
rs583251129
MGI SNP Detail		 Chr9:56978237 Gm10658 within coordinates of
Tssr89753 926 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs586586638
MGI SNP Detail		 Chr9:56978254 Gm10658 within coordinates of
Tssr89753 909 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs580078471
MGI SNP Detail		 Chr9:56978293 Gm10658 within coordinates of
Tssr89753 870 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs583411466
MGI SNP Detail		 Chr9:56978414 Gm10658 within coordinates of
Tssr89753 749 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs265344853
MGI SNP Detail		 Chr9:56978437 Gm10658 within coordinates of
Tssr89753 726 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223646861
MGI SNP Detail		 Chr9:56978448 Gm10658 within coordinates of
Tssr89753 715 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C C T T T T T T C T T T T T T T C T T T T
rs242171060
MGI SNP Detail		 Chr9:56978477 Gm10658 within coordinates of
Tssr89753 686 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs32794828
MGI SNP Detail		 Chr9:56978553 Gm10658 within coordinates of
Tssr89753 610 bp downstream
 SNP A/G A A A A A A A A G A A A A
rs586419215
MGI SNP Detail		 Chr9:56978630 Gm10658 within coordinates of
Tssr89753 533 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs581366189
MGI SNP Detail		 Chr9:56978634 Gm10658 within coordinates of
Tssr89753 529 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260195404
MGI SNP Detail		 Chr9:56978652 Gm10658 within coordinates of
Tssr89753 511 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215296874
MGI SNP Detail		 Chr9:56978914 Gm10658 within coordinates of
Tssr89753 249 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240635032
MGI SNP Detail		 Chr9:56979115 Gm10658 within coordinates of
Rr401391 within coordinates of
Tssr89753 48 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs250379672
MGI SNP Detail		 Chr9:56979139 Gm10658 within coordinates of
Rr401391 within coordinates of
Tssr89752 within coordinates of
Tssr89753 24 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214137944
MGI SNP Detail		 Chr9:56979415 Cpgi21807 within coordinates of
Sin3a within coordinates of
Tssr89753 226 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C C T T T T T T C T T T T T T C T T T T
rs229760433
MGI SNP Detail		 Chr9:56979463 Cpgi21807 within coordinates of
Rr368762 within coordinates of
Sin3a within coordinates of
Tssr89753 274 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250679500
MGI SNP Detail		 Chr9:56979471 Cpgi21807 within coordinates of
Rr368762 within coordinates of
Sin3a within coordinates of
Tssr89753 282 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223001804
MGI SNP Detail		 Chr9:56979549 Cpgi21807 within coordinates of
Rr368762 within coordinates of
Sin3a within coordinates of
Tssr89753 360 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs240683700
MGI SNP Detail		 Chr9:56979616 Cpgi21807 within coordinates of
Rr368762 within coordinates of
Sin3a within coordinates of
Tssr89753 427 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263135313
MGI SNP Detail		 Chr9:56979978 Cpgi21807 within coordinates of
Rr368762 within coordinates of
Sin3a within coordinates of
Tssr89753 789 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs225040013
MGI SNP Detail		 Chr9:56980104 Cpgi21807 within coordinates of
Rr368762 within coordinates of
Sin3a within coordinates of
Tssr89753 915 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245998972
MGI SNP Detail		 Chr9:56980127 Cpgi21807 within coordinates of
Rr368762 within coordinates of
Sin3a within coordinates of
Tssr89753 938 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs262825917
MGI SNP Detail		 Chr9:56980139 Cpgi21807 within coordinates of
Rr368762 within coordinates of
Sin3a within coordinates of
Tssr89753 950 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218085170
MGI SNP Detail		 Chr9:56980145 Cpgi21807 within coordinates of
Rr368762 within coordinates of
Sin3a within coordinates of
Tssr89753 956 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs236909586
MGI SNP Detail		 Chr9:56980146 Cpgi21807 within coordinates of
Rr368762 within coordinates of
Sin3a within coordinates of
Tssr89753 957 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs32794830
MGI SNP Detail		 Chr9:56980160 Cpgi21807 within coordinates of
Rr368762 within coordinates of
Sin3a within coordinates of
Tssr89753 971 bp upstream
 SNP A/G A A A A A A A G A A A A
rs228306884
MGI SNP Detail		 Chr9:56980170 Cpgi21807 within coordinates of
Rr368762 within coordinates of
Sin3a within coordinates of
Tssr89753 981 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A A G G G G G G A G G G G G G G G G G G
rs254680990
MGI SNP Detail		 Chr9:56980382 Cpgi21807 within coordinates of
Rr368762 within coordinates of
Sin3a within coordinates of
Tssr89753 1193 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A T T A A A A A A T A A A A A A T A A A
rs32794832
MGI SNP Detail		 Chr9:56980673 Cpgi21807 within coordinates of
Rr368762 within coordinates of
Sin3a within coordinates of
Tssr89753 1484 bp upstream
 SNP C/T T T T T T T T T C T T T T
rs232349488
MGI SNP Detail		 Chr9:56980808 Cpgi21807 within coordinates of
Rr368762 within coordinates of
Sin3a within coordinates of
Tssr89753 1619 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs584506481
MGI SNP Detail		 Chr9:56980923 Cpgi21807 within coordinates of
Rr368762 within coordinates of
Sin3a within coordinates of
Tssr89753 1734 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G T T G G G G G G T G G G G G G G G G G G
rs587536886
MGI SNP Detail		 Chr9:56980924 Cpgi21807 within coordinates of
Rr368762 within coordinates of
Sin3a within coordinates of
Tssr89753 1735 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C T T C C C C C C T C C C C C C C C C C C
rs581583847
MGI SNP Detail		 Chr9:56980927 Cpgi21807 within coordinates of
Rr368762 within coordinates of
Sin3a within coordinates of
Tssr89753 1738 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A T T A A A A A A T A A A A A A A A A A A
rs584479866
MGI SNP Detail		 Chr9:56980929 Cpgi21807 within coordinates of
Rr368762 within coordinates of
Sin3a within coordinates of
Tssr89753 1740 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G T T G G G G G G T G G G G G G G G G G G
rs33635888
MGI SNP Detail		 Chr9:56980947 Cpgi21807 within coordinates of
Rr368762 within coordinates of
Sin3a within coordinates of
Tssr89753 1758 bp upstream
 SNP C/T C C T C C C
rs214104913
MGI SNP Detail		 Chr9:56980992 Cpgi21807 within coordinates of
Rr368762 within coordinates of
Sin3a within coordinates of
Tssr89753 1803 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229736380
MGI SNP Detail		 Chr9:56981171 Cpgi21807 within coordinates of
Gm57026 within coordinates of
Rr368762 within coordinates of
Sin3a within coordinates of
Tssr89753 1982 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32795624
MGI SNP Detail		 Chr9:56981186 Cpgi21807 within coordinates of
Gm57026 within coordinates of
Rr368762 within coordinates of
Sin3a within coordinates of
Tssr89753 1997 bp upstream
 SNP C/T T T T T T T T T C T T T
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Showing SNP(s) 1 - 44 of 44
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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