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Mouse SNP Summary
Symbol
Name
ID
Tssr89802
transcription start site region 89802
MGI:6017569

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Showing SNP(s) 1 - 62 of 62

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs247193521
MGI SNP Detail
Chr9:57550460 Csk within coordinates of
Tssr89802 1948 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs261656715
MGI SNP Detail
Chr9:57550577 Csk within coordinates of
Tssr89802 1831 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs229723591
MGI SNP Detail
Chr9:57550622 Csk within coordinates of
Tssr89802 1786 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241164365
MGI SNP Detail
Chr9:57550652 Csk within coordinates of
Tssr89802 1756 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259973144
MGI SNP Detail
Chr9:57550877 Csk within coordinates of
Tssr89802 1531 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226888202
MGI SNP Detail
Chr9:57550939 Csk within coordinates of
Tssr89802 1469 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A A G G G G G G A G G G G G G G G G G G G
rs246021470
MGI SNP Detail
Chr9:57550948 Csk within coordinates of
Tssr89802 1460 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs214432734
MGI SNP Detail
Chr9:57551031 Csk within coordinates of
Tssr89802 1377 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs231026365
MGI SNP Detail
Chr9:57551195 Csk within coordinates of
Tssr89802 1213 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs256137212
MGI SNP Detail
Chr9:57551206 Csk within coordinates of
Tssr89802 1202 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs211927584
MGI SNP Detail
Chr9:57551239 Csk within coordinates of
Tssr89802 1169 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C T T C C C C C C T C C C C C C T C C C C
rs237310003
MGI SNP Detail
Chr9:57551248 Csk within coordinates of
Tssr89802 1160 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247961713
MGI SNP Detail
Chr9:57551261 Csk within coordinates of
Tssr89802 1147 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A G G A A A A A A G A A A A A A A A A A A
rs217131420
MGI SNP Detail
Chr9:57551409 Csk within coordinates of
Tssr89802 999 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261150431
MGI SNP Detail
Chr9:57551541 Csk within coordinates of
Tssr89802 867 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C
rs221939922
MGI SNP Detail
Chr9:57551542 Csk within coordinates of
Tssr89802 866 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T
rs241196868
MGI SNP Detail
Chr9:57551571 Csk within coordinates of
Tssr89802 837 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C C T T T T T T C T T T T T T T T T T T T
rs260262117
MGI SNP Detail
Chr9:57551572 Csk within coordinates of
Tssr89802 836 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A A G G G G G G A G G G G G G G G G G G G
rs221067195
MGI SNP Detail
Chr9:57551625 Csk within coordinates of
Tssr89802 783 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs240110681
MGI SNP Detail
Chr9:57551646 Csk within coordinates of
Tssr89802 762 bp downstream
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs262388122
MGI SNP Detail
Chr9:57551652 Csk within coordinates of
Tssr89802 756 bp downstream
SNP C/T T T T T T T T T T T T T T T T T C T T T T C T T T T C T T T T T
rs249264193
MGI SNP Detail
Chr9:57551659 Csk within coordinates of
Tssr89802 749 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A G A A A A A A A A A A A
rs264622476
MGI SNP Detail
Chr9:57551668 Csk within coordinates of
Tssr89802 740 bp downstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs224849431
MGI SNP Detail
Chr9:57551697 Csk within coordinates of
Tssr89802 711 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs247850527
MGI SNP Detail
Chr9:57551786 Csk within coordinates of
Tssr89802 622 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217388735
MGI SNP Detail
Chr9:57551874 Csk within coordinates of
Tssr89802 534 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233829736
MGI SNP Detail
Chr9:57551949 Csk within coordinates of
Tssr89802 459 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G C C G G G G G G C G G G G G G G G G G G G
rs257905306
MGI SNP Detail
Chr9:57551961 Csk within coordinates of
Tssr89802 447 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs213344171
MGI SNP Detail
Chr9:57551979 Csk within coordinates of
Tssr89802 429 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T T C C C C C C T C C C C C C C C C C C C
rs238853113
MGI SNP Detail
Chr9:57552101 Cpgi21828 within coordinates of
Csk within coordinates of
Tssr89802 307 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A C C A A A A A A C A A A A A A A C A A A A
rs255266136
MGI SNP Detail
Chr9:57552258 Cpgi21828 within coordinates of
Csk within coordinates of
Tssr89802 150 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T C C T T T T T T C T T T T T T T C T T T
rs220753858
MGI SNP Detail
Chr9:57552403 Cpgi21828 within coordinates of
Csk within coordinates of
Tssr89802 5 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs234667312
MGI SNP Detail
Chr9:57552426 Cpgi21828 within coordinates of
Csk within coordinates of
Tssr89802 7 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A A G G G G G G A G G G G G G G G G G G G
rs253392650
MGI SNP Detail
Chr9:57552643 Cpgi21828 within coordinates of
Csk within coordinates of
Tssr89802 224 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A G A A A A A A G A A A A A A A G A A A A
rs221097279
MGI SNP Detail
Chr9:57552654 Cpgi21828 within coordinates of
Csk within coordinates of
Tssr89802 235 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A G A A A A A A G A A A A A A A G A A A A
rs240403018
MGI SNP Detail
Chr9:57552678 Cpgi21828 within coordinates of
Csk within coordinates of
Tssr89802 259 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs585607315
MGI SNP Detail
Chr9:57552771 Cpgi21828 within coordinates of
Csk within coordinates of
Tssr89802 352 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G A G G G G G G A G G G G G G G G G G
rs265104722
MGI SNP Detail
Chr9:57552782 Cpgi21828 within coordinates of
Csk within coordinates of
Tssr89802 363 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C T T C C C C C C T C C C C C C C C C C
rs223481825
MGI SNP Detail
Chr9:57552832 Cpgi21828 within coordinates of
Csk within coordinates of
Tssr89802 413 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A G G A A A A A A G A A A A A A G A A A A
rs244287435
MGI SNP Detail
Chr9:57552854 Cpgi21828 within coordinates of
Csk within coordinates of
Tssr89802 435 bp upstream
Tssr89807 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs262042627
MGI SNP Detail
Chr9:57552959 Cpgi21828 within coordinates of
Csk within coordinates of
Tssr89802 540 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A C C A A A A A A C A A A A A A C A A A A
rs228614657
MGI SNP Detail
Chr9:57553004 Cpgi21828 within coordinates of
Csk within coordinates of
Tssr89802 585 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247884202
MGI SNP Detail
Chr9:57553165 Cpgi21828 within coordinates of
Csk within coordinates of
Tssr89802 746 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs261165085
MGI SNP Detail
Chr9:57553214 Cpgi21828 within coordinates of
Csk within coordinates of
Tssr89802 795 bp upstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs580605007
MGI SNP Detail
Chr9:57553219 Cpgi21828 within coordinates of
Csk within coordinates of
Tssr89802 800 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227357149
MGI SNP Detail
Chr9:57553238 Cpgi21828 within coordinates of
Csk within coordinates of
Tssr89802 819 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T C T T T T T C T T T T C T T T T
rs213853828
MGI SNP Detail
Chr9:57553271 Cpgi21828 within coordinates of
Csk within coordinates of
Tssr89802 852 bp upstream
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs230645887
MGI SNP Detail
Chr9:57553352 Cpgi21828 within coordinates of
Csk within coordinates of
Tssr89802 933 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G C C G G G G G G C G G G G G G G G G G G G
rs251979859
MGI SNP Detail
Chr9:57553385 Cpgi21828 within coordinates of
Csk within coordinates of
Tssr89802 966 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A T T A A A A A A T A A A A A A A T A A A A
rs212666981
MGI SNP Detail
Chr9:57553577 Csk within coordinates of
Tssr89802 1158 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A G G A A A A A A G A A A A A A A A A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234048234
MGI SNP Detail
Chr9:57553593 Csk within coordinates of
Tssr89802 1174 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T G G T T T T T T G T T T T T T T G T T T T
rs583982375
MGI SNP Detail
Chr9:57553643 Csk within coordinates of
Tssr89802 1224 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253470618
MGI SNP Detail
Chr9:57553789 Csk within coordinates of
Tssr89802 1370 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C
rs29931130
MGI SNP Detail
Chr9:57553801 Csk within coordinates of
Tssr89802 1382 bp upstream
SNP C/T C T C
rs30141294
MGI SNP Detail
Chr9:57553827 Csk within coordinates of
Tssr89802 1408 bp upstream
SNP C/T C T C
rs215451085
MGI SNP Detail
Chr9:57554069 Csk within coordinates of
Tssr89802 1650 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241608882
MGI SNP Detail
Chr9:57554089 Csk within coordinates of
Tssr89802 1670 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257433585
MGI SNP Detail
Chr9:57554126 Csk within coordinates of
Tssr89802 1707 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T T C C C C C C T C C C C C C C C C C C C
rs223568744
MGI SNP Detail
Chr9:57554156 Csk within coordinates of
Tssr89802 1737 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T G G T T T T T T G T T T T T T T G T T T T
rs241319281
MGI SNP Detail
Chr9:57554381 Csk within coordinates of
Tssr89802 1962 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs261577738
MGI SNP Detail
Chr9:57554397 Csk within coordinates of
Tssr89802 1978 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222897541
MGI SNP Detail
Chr9:57554402 Csk within coordinates of
Tssr89802 1983 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T T C C C C C C T C C C C C C C C C C C C
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Showing SNP(s) 1 - 62 of 62

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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory