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Mouse SNP Summary
Symbol
Name
ID
Tssr90473
transcription start site region 90473
MGI:6018240

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Showing SNP(s) 1 - 73 of 73

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs50352521
MGI SNP Detail
Chr9:72004726 Tcf12 within coordinates of
Tssr90473 1932 bp downstream
SNP A/T A A A A A A T A A A T A A T A
rs243097648
MGI SNP Detail
Chr9:72004801 Tcf12 within coordinates of
Tssr90473 1857 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs578529448
MGI SNP Detail
Chr9:72004855 Tcf12 within coordinates of
Tssr90473 1803 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs256410312
MGI SNP Detail
Chr9:72004858 Tcf12 within coordinates of
Tssr90473 1800 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs223909101
MGI SNP Detail
Chr9:72004863 Tcf12 within coordinates of
Tssr90473 1795 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs253653648
MGI SNP Detail
Chr9:72004881 Tcf12 within coordinates of
Tssr90473 1777 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs50949323
MGI SNP Detail
Chr9:72004918 Tcf12 within coordinates of
Tssr90473 1740 bp downstream
SNP A/G A A A A A A A A A A G A A A A
rs50095407
MGI SNP Detail
Chr9:72005026 Tcf12 within coordinates of
Tssr90473 1632 bp downstream
SNP C/G C C C C C C G C C C C C C C C
rs230854226
MGI SNP Detail
Chr9:72005074 Tcf12 within coordinates of
Tssr90473 1584 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48001822
MGI SNP Detail
Chr9:72005109 Tcf12 within coordinates of
Tssr90473 1549 bp downstream
SNP A/T A A A A A A A A A A T A A T A
rs215779111
MGI SNP Detail
Chr9:72005143 Tcf12 within coordinates of
Tssr90473 1515 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs234206693
MGI SNP Detail
Chr9:72005161 Tcf12 within coordinates of
Tssr90473 1497 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253146873
MGI SNP Detail
Chr9:72005170 Tcf12 within coordinates of
Tssr90473 1488 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs212087176
MGI SNP Detail
Chr9:72005348 Tcf12 within coordinates of
Tssr90473 1310 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230787022
MGI SNP Detail
Chr9:72005352 Tcf12 within coordinates of
Tssr90473 1306 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs48272259
MGI SNP Detail
Chr9:72005405 Tcf12 within coordinates of
Tssr90473 1253 bp downstream
SNP A/G A A A A A A G A A A G A A A
rs48014737
MGI SNP Detail
Chr9:72005436 Tcf12 within coordinates of
Tssr90473 1222 bp downstream
SNP A/C A A A A A A C A A A A A A A A
rs247962360
MGI SNP Detail
Chr9:72005473 Tcf12 within coordinates of
Tssr90473 1185 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46153742
MGI SNP Detail
Chr9:72005504 Tcf12 within coordinates of
Tssr90473 1154 bp downstream
SNP C/G C C C C C C C C C C G C C G C
rs51825446
MGI SNP Detail
Chr9:72005506 Tcf12 within coordinates of
Tssr90473 1152 bp downstream
SNP A/G A A A A A A G A A A A A G A
rs49197205
MGI SNP Detail
Chr9:72005581 Tcf12 within coordinates of
Tssr90473 1077 bp downstream
SNP A/G A A A A A A G A A A A A A A A
rs256379115
MGI SNP Detail
Chr9:72005604 Tcf12 within coordinates of
Tssr90473 1054 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs47957721
MGI SNP Detail
Chr9:72005768 Tcf12 within coordinates of
Tssr90473 890 bp downstream
SNP G/T T T T G T T T G T T T G G T T G T T
rs243623130
MGI SNP Detail
Chr9:72005784 Tcf12 within coordinates of
Tssr90473 874 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs264976528
MGI SNP Detail
Chr9:72005791 Tcf12 within coordinates of
Tssr90473 867 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs48264116
MGI SNP Detail
Chr9:72005857 Tcf12 within coordinates of
Tssr90473 801 bp downstream
SNP A/G A A A A A A A A A A G A A G A
rs50500570
MGI SNP Detail
Chr9:72005943 Tcf12 within coordinates of
Tssr90473 715 bp downstream
SNP A/G A A A A A A A A A A G A A G A
rs257891106
MGI SNP Detail
Chr9:72006064 Tcf12 within coordinates of
Tssr90473 594 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs228233360
MGI SNP Detail
Chr9:72006088 Tcf12 within coordinates of
Tssr90473 570 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs247356231
MGI SNP Detail
Chr9:72006111 Tcf12 within coordinates of
Tssr90473 547 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs211940321
MGI SNP Detail
Chr9:72006140 Tcf12 within coordinates of
Tssr90473 518 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs48450791
MGI SNP Detail
Chr9:72006197 Tcf12 within coordinates of
Tssr90473 461 bp downstream
SNP C/T T T T T T T T T T T C T T C T
rs50625325
MGI SNP Detail
Chr9:72006201 Tcf12 within coordinates of
Tssr90473 457 bp downstream
SNP G/T T T T T T T G T T T T T T T T
rs215202873
MGI SNP Detail
Chr9:72006202 Tcf12 within coordinates of
Tssr90473 456 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46258363
MGI SNP Detail
Chr9:72006319 Tcf12 within coordinates of
Tssr90473 339 bp downstream
SNP A/C C C C C C C C C C C A C C A C
rs253765081
MGI SNP Detail
Chr9:72006341 Tcf12 within coordinates of
Tssr90473 317 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs47348598
MGI SNP Detail
Chr9:72006400 Tcf12 within coordinates of
Tssr90473 258 bp downstream
SNP C/T C C C C C C C C C C T C C T C
rs236573253
MGI SNP Detail
Chr9:72006411 Tcf12 within coordinates of
Tssr90473 247 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46570203
MGI SNP Detail
Chr9:72006412 Tcf12 within coordinates of
Tssr90473 246 bp downstream
SNP A/T T T T T T T A T T T A T T T
rs219125417
MGI SNP Detail
Chr9:72006423 Tcf12 within coordinates of
Tssr90473 235 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs46707181
MGI SNP Detail
Chr9:72006441 Tcf12 within coordinates of
Tssr90473 217 bp downstream
SNP C/T T T T T T T C T T T T T T T T
rs49687537
MGI SNP Detail
Chr9:72006515 Tcf12 within coordinates of
Tssr90473 143 bp downstream
SNP A/G A A A A A A G A A A G A A G A
rs50126337
MGI SNP Detail
Chr9:72006555 Tcf12 within coordinates of
Tssr90473 103 bp downstream
SNP A/T A A A A A A A A A A T A A T A
rs244836877
MGI SNP Detail
Chr9:72006558 Tcf12 within coordinates of
Tssr90473 100 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs581890588
MGI SNP Detail
Chr9:72006683 Tcf12 within coordinates of
Tssr90473 21 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585347277
MGI SNP Detail
Chr9:72006958 Tcf12 within coordinates of
Tssr90473 296 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254473002
MGI SNP Detail
Chr9:72006983 Tcf12 within coordinates of
Tssr90473 321 bp upstream
SNP A/G G A
rs579847284
MGI SNP Detail
Chr9:72006985 Tcf12 within coordinates of
Tssr90473 323 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs582069626
MGI SNP Detail
Chr9:72006988 Tcf12 within coordinates of
Tssr90473 326 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs228048056
MGI SNP Detail
Chr9:72007003 Tcf12 within coordinates of
Tssr90473 341 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs247229056
MGI SNP Detail
Chr9:72007044 Tcf12 within coordinates of
Tssr90473 382 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs48711974
MGI SNP Detail
Chr9:72007144 Tcf12 within coordinates of
Tssr90473 482 bp upstream
SNP A/C A A A A A A C A A A C A A C A
rs228630990
MGI SNP Detail
Chr9:72007191 Tcf12 within coordinates of
Tssr90473 529 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs30221907
MGI SNP Detail
Chr9:72007258 Tcf12 within coordinates of
Tssr90473 596 bp upstream
SNP A/T T T T A T T T A A T T T A A T T A T
rs214783421
MGI SNP Detail
Chr9:72007323 Tcf12 within coordinates of
Tssr90473 661 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240065689
MGI SNP Detail
Chr9:72007523 Tcf12 within coordinates of
Tssr90473 861 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs33662175
MGI SNP Detail
Chr9:72007556 Tcf12 within coordinates of
Tssr90473 894 bp upstream
SNP A/G A A G A G A G A A G G G A A G G A G A
rs216764566
MGI SNP Detail
Chr9:72007700 Tcf12 within coordinates of
Tssr90473 1038 bp upstream
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs49613485
MGI SNP Detail
Chr9:72007702 Tcf12 within coordinates of
Tssr90473 1040 bp upstream
SNP A/G G G G G G G G G G G G G G A G
rs585696851
MGI SNP Detail
Chr9:72007732 Tcf12 within coordinates of
Tssr90473 1070 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs249812659
MGI SNP Detail
Chr9:72007760 Tcf12 within coordinates of
Tssr90473 1098 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221394387
MGI SNP Detail
Chr9:72007774 Tcf12 within coordinates of
Tssr90473 1112 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236495721
MGI SNP Detail
Chr9:72007892 Tcf12 within coordinates of
Tssr90473 1230 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs262656028
MGI SNP Detail
Chr9:72007895 Tcf12 within coordinates of
Tssr90473 1233 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224607649
MGI SNP Detail
Chr9:72007896 Tcf12 within coordinates of
Tssr90473 1234 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240413046
MGI SNP Detail
Chr9:72007918 Tcf12 within coordinates of
Tssr90473 1256 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251616674
MGI SNP Detail
Chr9:72007932 Tcf12 within coordinates of
Tssr90473 1270 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221758724
MGI SNP Detail
Chr9:72008064 Tcf12 within coordinates of
Tssr90473 1402 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs46558083
MGI SNP Detail
Chr9:72008097 Tcf12 within coordinates of
Tssr90473 1435 bp upstream
SNP A/T A A A A A A A A A A T A A T A
rs253727430
MGI SNP Detail
Chr9:72008117 Tcf12 within coordinates of
Tssr90473 1455 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs229075143
MGI SNP Detail
Chr9:72008139 Tcf12 within coordinates of
Tssr90473 1477 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs51164278
MGI SNP Detail
Chr9:72008312 Tcf12 within coordinates of
Tssr90473 1650 bp upstream
SNP A/G A A A A A A G A A A G A A G A
rs30083615
MGI SNP Detail
Chr9:72008544 Tcf12 within coordinates of
Tssr90473 1882 bp upstream
SNP A/G A G G G
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Showing SNP(s) 1 - 73 of 73

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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory