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Mouse SNP Summary
Symbol
Name
ID 		Tssr90888
transcription start site region 90888
MGI:6018655

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222666405
MGI SNP Detail		 Chr9:92130571 Gm67683 within coordinates of
Tssr90888 1992 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs232806264
MGI SNP Detail		 Chr9:92130587 Gm67683 within coordinates of
Tssr90888 1976 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs251862490
MGI SNP Detail		 Chr9:92130592 Gm67683 within coordinates of
Tssr90888 1971 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219261268
MGI SNP Detail		 Chr9:92130606 Gm67683 within coordinates of
Tssr90888 1957 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C
rs243890400
MGI SNP Detail		 Chr9:92130636 Gm67683 within coordinates of
Tssr90888 1927 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs584196147
MGI SNP Detail		 Chr9:92130706 Gm67683 within coordinates of
Tssr90888 1857 bp downstream
 SNP A/C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C A C C A T C C C A C C C A C C
rs578445116
MGI SNP Detail		 Chr9:92130733 Gm67683 within coordinates of
Tssr90888 1830 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs580921423
MGI SNP Detail		 Chr9:92130734 Gm67683 within coordinates of
Tssr90888 1829 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs264546458
MGI SNP Detail		 Chr9:92130760 Gm67683 within coordinates of
Tssr90888 1803 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G
rs221113387
MGI SNP Detail		 Chr9:92130781 Gm67683 within coordinates of
Tssr90888 1782 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C C C G C C C C C C C G C C C C
rs249763208
MGI SNP Detail		 Chr9:92130830 Gm67683 within coordinates of
Tssr90888 1733 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C C C C C C C C C C C G C C C C
rs260989997
MGI SNP Detail		 Chr9:92130963 Gm67683 within coordinates of
Tssr90888 1600 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227746446
MGI SNP Detail		 Chr9:92130989 Gm67683 within coordinates of
Tssr90888 1574 bp downstream
 SNP C/G/T C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248261684
MGI SNP Detail		 Chr9:92130990 Gm67683 within coordinates of
Tssr90888 1573 bp downstream
 SNP A/G G A
rs257843419
MGI SNP Detail		 Chr9:92130992 Gm67683 within coordinates of
Tssr90888 1571 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs231493436
MGI SNP Detail		 Chr9:92131062 Gm67683 within coordinates of
Tssr90888 1501 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs263733361
MGI SNP Detail		 Chr9:92131092 Gm67683 within coordinates of
Tssr90888 1471 bp downstream
 SNP C/T C T
rs221380170
MGI SNP Detail		 Chr9:92131095 Gm67683 within coordinates of
Tssr90888 1468 bp downstream
 SNP C/T C T
rs239622352
MGI SNP Detail		 Chr9:92131105 Gm67683 within coordinates of
Tssr90888 1458 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs247539834
MGI SNP Detail		 Chr9:92131111 Gm67683 within coordinates of
Tssr90888 1452 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs37700352
MGI SNP Detail		 Chr9:92131309 Gm67683 within coordinates of
Tssr90888 1254 bp downstream
 SNP A/C A C C
rs232862114
MGI SNP Detail		 Chr9:92131311 Gm67683 within coordinates of
Tssr90888 1252 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs251906881
MGI SNP Detail		 Chr9:92131312 Gm67683 within coordinates of
Tssr90888 1251 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs222503905
MGI SNP Detail		 Chr9:92131335 Gm67683 within coordinates of
Tssr90888 1228 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs238912075
MGI SNP Detail		 Chr9:92131338 Gm67683 within coordinates of
Tssr90888 1225 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255345762
MGI SNP Detail		 Chr9:92131383 Gm67683 within coordinates of
Tssr90888 1180 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs220822111
MGI SNP Detail		 Chr9:92131427 Gm67683 within coordinates of
Tssr90888 1136 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs582546031
MGI SNP Detail		 Chr9:92131436 Gm67683 within coordinates of
Tssr90888 1127 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs241765016
MGI SNP Detail		 Chr9:92131513 Gm67683 within coordinates of
Rr383753 within coordinates of
Tssr90888 1050 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C
rs261039831
MGI SNP Detail		 Chr9:92131542 Gm67683 within coordinates of
Rr383753 within coordinates of
Tssr90888 1021 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs220701354
MGI SNP Detail		 Chr9:92131587 Gm67683 within coordinates of
Rr383753 within coordinates of
Tssr90888 976 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs241653069
MGI SNP Detail		 Chr9:92131628 Gm67683 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 935 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs586231324
MGI SNP Detail		 Chr9:92131639 Gm67683 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 924 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257906467
MGI SNP Detail		 Chr9:92131656 Gm67683 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 907 bp downstream
 SNP A/C/G A A A A A A A A A A A A A A A A A A A A A A C A A A A G A A A A A A A A A A A A C A A A A A A A A A A A A
rs231223125
MGI SNP Detail		 Chr9:92131752 Gm67683 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 811 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs253165553
MGI SNP Detail		 Chr9:92131789 Gm67683 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 774 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262070954
MGI SNP Detail		 Chr9:92131810 Gm67683 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 753 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs234312411
MGI SNP Detail		 Chr9:92131833 Gm67683 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 730 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs247602270
MGI SNP Detail		 Chr9:92131852 Gm67683 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 711 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs37086802
MGI SNP Detail		 Chr9:92131911 Gm67683 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 652 bp downstream
 SNP A/G A G G
rs227640064
MGI SNP Detail		 Chr9:92131953 Gm67683 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 610 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245998074
MGI SNP Detail		 Chr9:92131954 Gm67683 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 609 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs214188838
MGI SNP Detail		 Chr9:92131963 Gm67683 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 600 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T
rs236927539
MGI SNP Detail		 Chr9:92131971 Gm67683 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 592 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs260797973
MGI SNP Detail		 Chr9:92132017 Gm67683 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 546 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs212685024
MGI SNP Detail		 Chr9:92132025 Gm67683 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 538 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs235367216
MGI SNP Detail		 Chr9:92132026 Gm67683 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 537 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs255028930
MGI SNP Detail		 Chr9:92132029 Gm67683 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 534 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs220761381
MGI SNP Detail		 Chr9:92132052 Gm67683 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 511 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240994931
MGI SNP Detail		 Chr9:92132095 Gm67683 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr86499 within coordinates of
Tssr90888 468 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs256718285
MGI SNP Detail		 Chr9:92132096 Gm67683 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr86499 within coordinates of
Tssr90888 467 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30228341
MGI SNP Detail		 Chr9:92132138 Gm67683 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr86501 within coordinates of
Tssr90888 425 bp downstream
 SNP C/T T T C
rs241621967
MGI SNP Detail		 Chr9:92132265 Cpgi22145 within coordinates of
Gm67683 within coordinates of
Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr86504 within coordinates of
Tssr90888 298 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs264941974
MGI SNP Detail		 Chr9:92132292 Cpgi22145 within coordinates of
Gm67683 within coordinates of
Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr86504 within coordinates of
Tssr90888 271 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs233350676
MGI SNP Detail		 Chr9:92132299 Cpgi22145 within coordinates of
Gm67683 within coordinates of
Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr86504 within coordinates of
Tssr90888 264 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C C C G C C C C C C C C C C C C
rs241774508
MGI SNP Detail		 Chr9:92132302 Cpgi22145 within coordinates of
Gm67683 within coordinates of
Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr86504 within coordinates of
Tssr90888 261 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs13470573
MGI SNP Detail		 Chr9:92132336 Cpgi22145 within coordinates of
Gm67683 within coordinates of
Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 227 bp downstream
 SNP G/T G T
rs37309046
MGI SNP Detail		 Chr9:92132422 Cpgi22145 within coordinates of
Gm67683 within coordinates of
Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 141 bp downstream
 SNP C/G C C G C
rs243906169
MGI SNP Detail		 Chr9:92132429 Cpgi22145 within coordinates of
Gm67683 within coordinates of
Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 134 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30165695
MGI SNP Detail		 Chr9:92132475 Cpgi22145 within coordinates of
Gm67683 within coordinates of
Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 88 bp downstream
 SNP C/G C C C G C G
rs231184475
MGI SNP Detail		 Chr9:92132477 Cpgi22145 within coordinates of
Gm67683 within coordinates of
Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 86 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs249105442
MGI SNP Detail		 Chr9:92132479 Cpgi22145 within coordinates of
Gm67683 within coordinates of
Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 84 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs256550076
MGI SNP Detail		 Chr9:92132559 Cpgi22145 within coordinates of
Gm67683 within coordinates of
Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 4 bp downstream
 SNP A/T A T
rs225458699
MGI SNP Detail		 Chr9:92132565 Cpgi22145 within coordinates of
Gm67683 within coordinates of
Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 within coordinates of
 SNP C/T T C
rs240122543
MGI SNP Detail		 Chr9:92132653 Cpgi22145 within coordinates of
Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 72 bp upstream
 SNP C/G G C
rs214967646
MGI SNP Detail		 Chr9:92132692 Cpgi22145 within coordinates of
Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 111 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs234524136
MGI SNP Detail		 Chr9:92132735 Cpgi22145 within coordinates of
Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 154 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261838698
MGI SNP Detail		 Chr9:92132851 Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 270 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G
rs223008360
MGI SNP Detail		 Chr9:92132885 Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 304 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30381989
MGI SNP Detail		 Chr9:92132962 Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 381 bp upstream
 SNP A/T A A T
rs256665780
MGI SNP Detail		 Chr9:92132968 Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 387 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222226173
MGI SNP Detail		 Chr9:92132977 Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 396 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs241830146
MGI SNP Detail		 Chr9:92133015 Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 434 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257487004
MGI SNP Detail		 Chr9:92133111 Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 530 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227756095
MGI SNP Detail		 Chr9:92133138 Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 557 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243324895
MGI SNP Detail		 Chr9:92133335 Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 754 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265314115
MGI SNP Detail		 Chr9:92133347 Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 766 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227726723
MGI SNP Detail		 Chr9:92133355 Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 774 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs252624363
MGI SNP Detail		 Chr9:92133365 Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 784 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261934699
MGI SNP Detail		 Chr9:92133379 Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 798 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228506379
MGI SNP Detail		 Chr9:92133406 Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 825 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs248697714
MGI SNP Detail		 Chr9:92133408 Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 827 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs37926073
MGI SNP Detail		 Chr9:92133411 Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 830 bp upstream
 SNP A/G G A A
rs234589868
MGI SNP Detail		 Chr9:92133412 Plscr1 within coordinates of
Rr206878 within coordinates of
Rr383753 within coordinates of
Tssr90888 831 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250457909
MGI SNP Detail		 Chr9:92133462 Plscr1 within coordinates of
Rr206878 within coordinates of
Tssr90888 881 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs214813466
MGI SNP Detail		 Chr9:92133483 Plscr1 within coordinates of
Rr206878 within coordinates of
Tssr90888 902 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C T T T C C C C C T C C T C C C T C C C T C C T C C C T C C
rs234319401
MGI SNP Detail		 Chr9:92133487 Plscr1 within coordinates of
Rr206878 within coordinates of
Tssr90888 906 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G A A A G G G G G A G G A G G G A G G G A G G A G G G A G G
rs257269156
MGI SNP Detail		 Chr9:92133558 Plscr1 within coordinates of
Rr206878 within coordinates of
Tssr90888 977 bp upstream
 SNP A/G G A
rs235734321
MGI SNP Detail		 Chr9:92133561 Plscr1 within coordinates of
Rr206878 within coordinates of
Tssr90888 980 bp upstream
 SNP G/T T G
rs235488869
MGI SNP Detail		 Chr9:92133586 Plscr1 within coordinates of
Rr206878 within coordinates of
Tssr90888 1005 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251508087
MGI SNP Detail		 Chr9:92133689 Plscr1 within coordinates of
Rr206878 within coordinates of
Tssr90888 1108 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A G G G A A A G A A G A A G A A A G A A A G A A G A A A G A A
rs36314964
MGI SNP Detail		 Chr9:92133701 Plscr1 within coordinates of
Rr206878 within coordinates of
Tssr90888 1120 bp upstream
 SNP C/G C G C C C
rs246218618
MGI SNP Detail		 Chr9:92133759 Plscr1 within coordinates of
Rr206878 within coordinates of
Tssr90888 1178 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36694720
MGI SNP Detail		 Chr9:92133792 Plscr1 within coordinates of
Rr206878 within coordinates of
Tssr90888 1211 bp upstream
 SNP A/G G A G G G A
rs213692795
MGI SNP Detail		 Chr9:92133813 Plscr1 within coordinates of
Rr206878 within coordinates of
Tssr90888 1232 bp upstream
 SNP C/T T C
rs242272758
MGI SNP Detail		 Chr9:92133861 Plscr1 within coordinates of
Rr206878 within coordinates of
Tssr90888 1280 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs260672813
MGI SNP Detail		 Chr9:92133865 Plscr1 within coordinates of
Rr206878 within coordinates of
Tssr90888 1284 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228540256
MGI SNP Detail		 Chr9:92133922 Plscr1 within coordinates of
Rr206878 within coordinates of
Tssr90888 1341 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248764347
MGI SNP Detail		 Chr9:92133923 Plscr1 within coordinates of
Rr206878 within coordinates of
Tssr90888 1342 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs258997551
MGI SNP Detail		 Chr9:92133937 Plscr1 within coordinates of
Rr206878 within coordinates of
Tssr90888 1356 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
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Showing SNP(s) 1 - 100 of 109
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory