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Mouse SNP Summary
Symbol
Name
ID 		Tssr91084
transcription start site region 91084
MGI:6018851

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Showing SNP(s) 1 - 65 of 65

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231641505
MGI SNP Detail		 Chr9:99756275 Gm16004 within coordinates of
Sox14 within coordinates of
Tssr91084 1976 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs250336044
MGI SNP Detail		 Chr9:99756618 Gm16004 within coordinates of
Sox14 within coordinates of
Tssr91084 1633 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs215614296
MGI SNP Detail		 Chr9:99756673 Gm16004 within coordinates of
Sox14 within coordinates of
Tssr91084 1578 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs29890333
MGI SNP Detail		 Chr9:99756695 Gm16004 within coordinates of
Sox14 within coordinates of
Tssr91084 1556 bp downstream
 SNP A/G G A A G A
rs255060527
MGI SNP Detail		 Chr9:99756904 Gm16004 within coordinates of
Sox14 within coordinates of
Tssr91084 1347 bp downstream
 SNP A/G A G
rs218532742
MGI SNP Detail		 Chr9:99756927 Cpgi22205 within coordinates of
Gm16004 within coordinates of
Sox14 within coordinates of
Tssr91084 1324 bp downstream
 SNP G/T T G
rs235317235
MGI SNP Detail		 Chr9:99756986 Cpgi22205 within coordinates of
Gm16004 within coordinates of
Sox14 within coordinates of
Tssr91084 1265 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260808597
MGI SNP Detail		 Chr9:99757000 Cpgi22205 within coordinates of
Gm16004 within coordinates of
Sox14 within coordinates of
Tssr91084 1251 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G A G G A G G G A A G A G G G G G G G G G G G G
rs214700666
MGI SNP Detail		 Chr9:99757008 Cpgi22205 within coordinates of
Gm16004 within coordinates of
Sox14 within coordinates of
Tssr91084 1243 bp downstream
 SNP C/T C C C C T C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C
rs238012143
MGI SNP Detail		 Chr9:99757030 Cpgi22205 within coordinates of
Gm16004 within coordinates of
Sox14 within coordinates of
Tssr91084 1221 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253608426
MGI SNP Detail		 Chr9:99757339 Cpgi22205 within coordinates of
Gm16004 within coordinates of
Sox14 within coordinates of
Tssr91084 912 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221950120
MGI SNP Detail		 Chr9:99757452 Cpgi22205 within coordinates of
Gm16004 within coordinates of
Sox14 within coordinates of
Tssr91084 799 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G A G G A G G G A A G A G G G G G G G G G G G
rs240634204
MGI SNP Detail		 Chr9:99757579 Cpgi22205 within coordinates of
Gm16004 within coordinates of
Sox14 within coordinates of
Tssr91084 672 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs255398572
MGI SNP Detail		 Chr9:99758006 Cpgi22205 within coordinates of
Gm16004 within coordinates of
Gm67910 within coordinates of
Sox14 within coordinates of
Tssr91084 245 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs226398572
MGI SNP Detail		 Chr9:99758019 Cpgi22205 within coordinates of
Gm16004 within coordinates of
Gm67910 within coordinates of
Sox14 within coordinates of
Tssr91084 232 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs235817890
MGI SNP Detail		 Chr9:99758071 Cpgi22205 within coordinates of
Gm16004 within coordinates of
Gm67910 within coordinates of
Sox14 within coordinates of
Tssr91084 180 bp downstream
 SNP A/G A G
rs264728424
MGI SNP Detail		 Chr9:99758079 Cpgi22205 within coordinates of
Gm16004 within coordinates of
Gm67910 within coordinates of
Sox14 within coordinates of
Tssr91084 172 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs231196994
MGI SNP Detail		 Chr9:99758092 Cpgi22205 within coordinates of
Gm16004 within coordinates of
Gm67910 within coordinates of
Sox14 within coordinates of
Tssr91084 159 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251947575
MGI SNP Detail		 Chr9:99758133 Cpgi22205 within coordinates of
Gm16004 within coordinates of
Gm67910 within coordinates of
Sox14 within coordinates of
Tssr91084 118 bp downstream
 SNP C/T C T
rs258549301
MGI SNP Detail		 Chr9:99758205 Cpgi22205 within coordinates of
Gm16004 within coordinates of
Gm67910 within coordinates of
Sox14 within coordinates of
Tssr91083 within coordinates of
Tssr91084 46 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G A G G A G G G A A G A G G G G G G G G G G G
rs226521772
MGI SNP Detail		 Chr9:99758244 Cpgi22205 within coordinates of
Gm16004 within coordinates of
Gm67910 within coordinates of
Tssr91083 within coordinates of
Tssr91084 7 bp downstream
 SNP C/G C C C C G C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C
rs29837504
MGI SNP Detail		 Chr9:99758277 Cpgi22205 within coordinates of
Gm16004 within coordinates of
Gm67910 within coordinates of
Tssr91084 12 bp upstream
 SNP A/C A C
rs29739025
MGI SNP Detail		 Chr9:99758429 Cpgi22205 within coordinates of
Gm16004 within coordinates of
Gm67910 within coordinates of
Tssr91084 164 bp upstream
 SNP C/T T C C T
rs231211313
MGI SNP Detail		 Chr9:99758490 Cpgi22205 within coordinates of
Gm16004 within coordinates of
Gm67910 within coordinates of
Tssr91084 225 bp upstream
 SNP A/T T A
rs248990036
MGI SNP Detail		 Chr9:99758517 Cpgi22205 within coordinates of
Gm16004 within coordinates of
Gm67910 within coordinates of
Tssr91084 252 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251795489
MGI SNP Detail		 Chr9:99758533 Gm16004 within coordinates of
Gm67910 within coordinates of
Tssr91084 268 bp upstream
 SNP C/T C T
rs236138558
MGI SNP Detail		 Chr9:99758642 Gm16004 within coordinates of
Gm67910 within coordinates of
Tssr91084 377 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs48840521
MGI SNP Detail		 Chr9:99758684 Gm16004 within coordinates of
Gm67910 within coordinates of
Tssr91084 419 bp upstream
 SNP A/C A C A
rs33748350
MGI SNP Detail		 Chr9:99758827 Gm16004 within coordinates of
Tssr91084 562 bp upstream
 SNP A/C A A C
rs242940484
MGI SNP Detail		 Chr9:99758874 Gm16004 within coordinates of
Tssr91084 609 bp upstream
 SNP A/G A G
rs30284480
MGI SNP Detail		 Chr9:99758897 Gm16004 within coordinates of
Tssr91084 632 bp upstream
 SNP C/G G G C C G
rs30428864
MGI SNP Detail		 Chr9:99758918 Gm16004 within coordinates of
Tssr91084 653 bp upstream
 SNP G/T T T G G T
rs30373994
MGI SNP Detail		 Chr9:99758926 Gm16004 within coordinates of
Tssr91084 661 bp upstream
 SNP A/C A A C C A
rs255684906
MGI SNP Detail		 Chr9:99758973 Gm16004 within coordinates of
Tssr91084 708 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs223446549
MGI SNP Detail		 Chr9:99759035 Gm16004 within coordinates of
Tssr91084 770 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs51588426
MGI SNP Detail		 Chr9:99759083 Gm16004 within coordinates of
Tssr91084 818 bp upstream
 SNP A/C C C A C
rs46760687
MGI SNP Detail		 Chr9:99759094 Gm16004 within coordinates of
Tssr91084 829 bp upstream
 SNP A/T T T A T
rs239056057
MGI SNP Detail		 Chr9:99759157 Gm16004 within coordinates of
Tssr91084 892 bp upstream
 SNP C/T T C
rs260131049
MGI SNP Detail		 Chr9:99759186 Gm16004 within coordinates of
Tssr91084 921 bp upstream
 SNP C/T T C
rs265834071
MGI SNP Detail		 Chr9:99759248 Gm16004 within coordinates of
Tssr91084 983 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C C G G G G G C C G G G G G G G G G G
rs50586735
MGI SNP Detail		 Chr9:99759323 Gm16004 within coordinates of
Tssr91084 1058 bp upstream
 SNP C C C C C C
rs251711338
MGI SNP Detail		 Chr9:99759407 Gm16004 within coordinates of
Tssr91084 1142 bp upstream
 SNP A/G G A
rs51759078
MGI SNP Detail		 Chr9:99759592 Gm16004 within coordinates of
Tssr91084 1327 bp upstream
 SNP C/G C C G C
rs50310537
MGI SNP Detail		 Chr9:99759600 Gm16004 within coordinates of
Tssr91084 1335 bp upstream
 SNP C/T C T C
rs50189638
MGI SNP Detail		 Chr9:99759662 Gm16004 within coordinates of
Tssr91084 1397 bp upstream
 SNP A/C C A C
rs47872584
MGI SNP Detail		 Chr9:99759673 Gm16004 within coordinates of
Tssr91084 1408 bp upstream
 SNP A/G G G A G
rs48444757
MGI SNP Detail		 Chr9:99759674 Gm16004 within coordinates of
Tssr91084 1409 bp upstream
 SNP C/T C T
rs224960909
MGI SNP Detail		 Chr9:99759708 Gm16004 within coordinates of
Tssr91084 1443 bp upstream
 SNP A/C A C
rs52556999
MGI SNP Detail		 Chr9:99759841 Gm16004 within coordinates of
Tssr91084 1576 bp upstream
 SNP A/T T A T
rs235547164
MGI SNP Detail		 Chr9:99759943 Gm16004 within coordinates of
Tssr91084 1678 bp upstream
 SNP C/T T T T C C T C T T T T T T T T T T T T T T C T T T C T C C C T C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214942628
MGI SNP Detail		 Chr9:99759945 Gm16004 within coordinates of
Tssr91084 1680 bp upstream
 SNP C/G C G
rs231637738
MGI SNP Detail		 Chr9:99759950 Gm16004 within coordinates of
Tssr91084 1685 bp upstream
 SNP C/T C C C T C T C C C C C C C C C C C C C C C C C T C T C C T C
rs582801166
MGI SNP Detail		 Chr9:99759956 Gm16004 within coordinates of
Tssr91084 1691 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs52102138
MGI SNP Detail		 Chr9:99759957 Gm16004 within coordinates of
Tssr91084 1692 bp upstream
 SNP T T
rs240104018
MGI SNP Detail		 Chr9:99760001 Gm16004 within coordinates of
Tssr91084 1736 bp upstream
 SNP A/G G A
rs263674296
MGI SNP Detail		 Chr9:99760028 Gm16004 within coordinates of
Tssr91084 1763 bp upstream
 SNP C/T T C
rs212710052
MGI SNP Detail		 Chr9:99760053 Gm16004 within coordinates of
Tssr91084 1788 bp upstream
 SNP A/C C A
rs236180113
MGI SNP Detail		 Chr9:99760060 Gm16004 within coordinates of
Tssr91084 1795 bp upstream
 SNP C/T C T
rs220663088
MGI SNP Detail		 Chr9:99760102 Gm16004 within coordinates of
Tssr91084 1837 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs240818552
MGI SNP Detail		 Chr9:99760105 Gm16004 within coordinates of
Tssr91084 1840 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265212675
MGI SNP Detail		 Chr9:99760106 Gm16004 within coordinates of
Tssr91084 1841 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51797364
MGI SNP Detail		 Chr9:99760125 Gm16004 within coordinates of
Tssr91084 1860 bp upstream
 SNP A/G G A G
rs108662403
MGI SNP Detail		 Chr9:99760174 Gm16004 within coordinates of
Tssr91084 1909 bp upstream
 SNP T T T T
rs238914623
MGI SNP Detail		 Chr9:99760228 Gm16004 within coordinates of
Tssr91084 1963 bp upstream
 SNP A/G G A
rs253701711
MGI SNP Detail		 Chr9:99760241 Gm16004 within coordinates of
Tssr91084 1976 bp upstream
 SNP C/T C T
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Showing SNP(s) 1 - 65 of 65
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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