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Mouse SNP Summary
Symbol
Name
ID 		Tssr93054
transcription start site region 93054
MGI:6020821

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Showing SNP(s) 1 - 58 of 58

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257299922
MGI SNP Detail		 Chr10:41393874 Tssr93054 1996 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs229333938
MGI SNP Detail		 Chr10:41393924 Tssr93054 1946 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs241536904
MGI SNP Detail		 Chr10:41394020 Tssr93054 1850 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265905673
MGI SNP Detail		 Chr10:41394121 Tssr93054 1749 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228735004
MGI SNP Detail		 Chr10:41394391 Gm67065 within coordinates of
Rr401848 within coordinates of
Rr430366 within coordinates of
Tssr93054 1479 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs252314926
MGI SNP Detail		 Chr10:41394492 Gm67065 within coordinates of
Rr401848 within coordinates of
Rr430366 within coordinates of
Tssr93054 1378 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214655241
MGI SNP Detail		 Chr10:41394513 Gm67065 within coordinates of
Rr401848 within coordinates of
Rr430366 within coordinates of
Tssr93054 1357 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T
rs225522225
MGI SNP Detail		 Chr10:41394560 Cpgi1473 within coordinates of
Gm67065 within coordinates of
Rr401848 within coordinates of
Rr430366 within coordinates of
Tssr93054 1310 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs247091761
MGI SNP Detail		 Chr10:41394581 Cpgi1473 within coordinates of
Gm67065 within coordinates of
Rr401848 within coordinates of
Rr430366 within coordinates of
Rr430367 within coordinates of
Tssr93054 1289 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214854838
MGI SNP Detail		 Chr10:41394654 Cpgi1473 within coordinates of
Gm67065 within coordinates of
Rr401848 within coordinates of
Rr430366 within coordinates of
Tssr93054 1216 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs236002365
MGI SNP Detail		 Chr10:41394656 Cpgi1473 within coordinates of
Gm67065 within coordinates of
Rr401848 within coordinates of
Rr430366 within coordinates of
Tssr93054 1214 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs259948302
MGI SNP Detail		 Chr10:41394701 Cpgi1473 within coordinates of
Gm67065 within coordinates of
Rr430366 within coordinates of
Tssr93054 1169 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs213670386
MGI SNP Detail		 Chr10:41394757 Cpgi1473 within coordinates of
Gm67065 within coordinates of
Rr430366 within coordinates of
Tssr93054 1113 bp upstream
 SNP C/G/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C T C C G C
rs235076316
MGI SNP Detail		 Chr10:41394766 Cpgi1473 within coordinates of
Gm67065 within coordinates of
Rr430366 within coordinates of
Tssr93054 1104 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262593162
MGI SNP Detail		 Chr10:41394769 Cpgi1473 within coordinates of
Gm67065 within coordinates of
Rr430366 within coordinates of
Tssr93054 1101 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219636446
MGI SNP Detail		 Chr10:41394915 Cpgi1473 within coordinates of
Gm67065 within coordinates of
Rr430366 within coordinates of
Tssr93054 955 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs240202139
MGI SNP Detail		 Chr10:41394918 Cpgi1473 within coordinates of
Gm67065 within coordinates of
Rr430366 within coordinates of
Tssr93054 952 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs251432790
MGI SNP Detail		 Chr10:41394952 Cpgi1473 within coordinates of
Gm67065 within coordinates of
Rr401849 within coordinates of
Rr430366 within coordinates of
Tssr93054 918 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C A C C C C C C A C C C C C C C A C C C A
rs222878136
MGI SNP Detail		 Chr10:41395068 Cpgi1473 within coordinates of
Gm67065 within coordinates of
Rr401849 within coordinates of
Rr430366 within coordinates of
Tssr93054 802 bp upstream
 SNP C/G/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T G T T T T
rs250206271
MGI SNP Detail		 Chr10:41395116 Cpgi1473 within coordinates of
Gm67065 within coordinates of
Rr401849 within coordinates of
Rr430366 within coordinates of
Tssr93054 754 bp upstream
Tssr97408 within coordinates of
 SNP C/G/T C C C C C C C C C C C C C C C C C C C G C C T C C C C G C C C C C G C C C C C C C C C C C C C C C C C C C
rs261990795
MGI SNP Detail		 Chr10:41395125 Cpgi1473 within coordinates of
Gm67065 within coordinates of
Rr401849 within coordinates of
Rr430366 within coordinates of
Tssr93054 745 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs229174509
MGI SNP Detail		 Chr10:41395235 Cpgi1473 within coordinates of
Gm67065 within coordinates of
Rr401849 within coordinates of
Rr430366 within coordinates of
Tssr93054 635 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs241191746
MGI SNP Detail		 Chr10:41395351 Cpgi1473 within coordinates of
Gm67065 within coordinates of
Rr430366 within coordinates of
Tssr93054 519 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265248885
MGI SNP Detail		 Chr10:41395383 Cpgi1473 within coordinates of
Gm67065 within coordinates of
Rr430366 within coordinates of
Tssr93054 487 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225683562
MGI SNP Detail		 Chr10:41395389 Cpgi1473 within coordinates of
Gm67065 within coordinates of
Rr430366 within coordinates of
Tssr93054 481 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs247144078
MGI SNP Detail		 Chr10:41395440 Cpgi1473 within coordinates of
Tssr93048 within coordinates of
Tssr93054 430 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258844212
MGI SNP Detail		 Chr10:41395480 Cpgi1473 within coordinates of
Tssr93054 390 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G G G G G G G C G G G G G G G G G G G G
rs229038833
MGI SNP Detail		 Chr10:41395676 Cd164 within coordinates of
Cpgi1473 within coordinates of
Tssr93054 194 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A
rs258814156
MGI SNP Detail		 Chr10:41395833 Cd164 within coordinates of
Cpgi1473 within coordinates of
Tssr93054 37 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs212527302
MGI SNP Detail		 Chr10:41395881 Cd164 within coordinates of
Cpgi1473 within coordinates of
Tssr93054 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G
rs236698439
MGI SNP Detail		 Chr10:41395918 Cd164 within coordinates of
Cpgi1473 within coordinates of
Tssr93054 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251907261
MGI SNP Detail		 Chr10:41395995 Cd164 within coordinates of
Cpgi1473 within coordinates of
Tssr93054 72 bp downstream
Tssr93057 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A G A A A G A A A A A A G A A A A A A A G A A A G
rs213908034
MGI SNP Detail		 Chr10:41396128 Cd164 within coordinates of
Cpgi1473 within coordinates of
Tssr93054 205 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs233780410
MGI SNP Detail		 Chr10:41396291 Cd164 within coordinates of
Tssr93054 368 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs251490320
MGI SNP Detail		 Chr10:41396381 Cd164 within coordinates of
Tssr93054 458 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222838730
MGI SNP Detail		 Chr10:41396436 Cd164 within coordinates of
Tssr93054 513 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs243968888
MGI SNP Detail		 Chr10:41396719 Cd164 within coordinates of
Tssr93054 796 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T A T T T T T A T T T T T T T T T T T T T T T T T T T
rs258265624
MGI SNP Detail		 Chr10:41396720 Cd164 within coordinates of
Tssr93054 797 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C C A C C C C C C C C C C C C C C C C C C C
rs219553834
MGI SNP Detail		 Chr10:41396733 Cd164 within coordinates of
Tssr93054 810 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241126198
MGI SNP Detail		 Chr10:41396789 Cd164 within coordinates of
Tssr93054 866 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258990914
MGI SNP Detail		 Chr10:41396889 Cd164 within coordinates of
Tssr93054 966 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47142129
MGI SNP Detail		 Chr10:41396919 Cd164 within coordinates of
Tssr93054 996 bp downstream
 SNP G/T G G G G G G T G G G T G G G G
rs49140847
MGI SNP Detail		 Chr10:41396932 Cd164 within coordinates of
Tssr93054 1009 bp downstream
 SNP A/C A A A A A A A A A A A A A C A
rs253748078
MGI SNP Detail		 Chr10:41396933 Cd164 within coordinates of
Tssr93054 1010 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs264774625
MGI SNP Detail		 Chr10:41397071 Cd164 within coordinates of
Tssr93054 1148 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs227347331
MGI SNP Detail		 Chr10:41397072 Cd164 within coordinates of
Tssr93054 1149 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255879749
MGI SNP Detail		 Chr10:41397194 Cd164 within coordinates of
Tssr93054 1271 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213961698
MGI SNP Detail		 Chr10:41397204 Cd164 within coordinates of
Tssr93054 1281 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs233920714
MGI SNP Detail		 Chr10:41397386 Cd164 within coordinates of
Tssr93054 1463 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs245491762
MGI SNP Detail		 Chr10:41397433 Cd164 within coordinates of
Tssr93054 1510 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs46965415
MGI SNP Detail		 Chr10:41397501 Cd164 within coordinates of
Tssr93054 1578 bp downstream
 SNP A/G A A A A A A G A A A G A A G A
rs242296029
MGI SNP Detail		 Chr10:41397510 Cd164 within coordinates of
Tssr93054 1587 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T
rs256499632
MGI SNP Detail		 Chr10:41397516 Cd164 within coordinates of
Tssr93054 1593 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220322084
MGI SNP Detail		 Chr10:41397628 Cd164 within coordinates of
Tssr93054 1705 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237033435
MGI SNP Detail		 Chr10:41397638 Cd164 within coordinates of
Tssr93054 1715 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251299007
MGI SNP Detail		 Chr10:41397719 Cd164 within coordinates of
Tssr93054 1796 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs47299227
MGI SNP Detail		 Chr10:41397761 Cd164 within coordinates of
Tssr93054 1838 bp downstream
 SNP A/G A A A A A A G A A A G A A G A
rs241262033
MGI SNP Detail		 Chr10:41397830 Cd164 within coordinates of
Tssr93054 1907 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
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Showing SNP(s) 1 - 58 of 58
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory