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Mouse SNP Summary
Symbol
Name
ID
Tssr96215
transcription start site region 96215
MGI:6023982

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Showing SNP(s) 1 - 70 of 70

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs48830354
MGI SNP Detail
Chr10:127315594 R3hdm2 within coordinates of
Rr213569 within coordinates of
Tssr96215 1922 bp upstream
SNP A A A
rs586668348
MGI SNP Detail
Chr10:127315645 R3hdm2 within coordinates of
Tssr96215 1871 bp upstream
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs245675088
MGI SNP Detail
Chr10:127315687 R3hdm2 within coordinates of
Tssr96215 1829 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs256022861
MGI SNP Detail
Chr10:127315690 R3hdm2 within coordinates of
Tssr96215 1826 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs224643993
MGI SNP Detail
Chr10:127315704 R3hdm2 within coordinates of
Tssr96215 1812 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs247728065
MGI SNP Detail
Chr10:127315709 R3hdm2 within coordinates of
Tssr96215 1807 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs218856592
MGI SNP Detail
Chr10:127315720 R3hdm2 within coordinates of
Tssr96215 1796 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs49718679
MGI SNP Detail
Chr10:127315855 R3hdm2 within coordinates of
Tssr96215 1661 bp upstream
SNP C/T C C C C C C C C C C T C C T C
rs29326427
MGI SNP Detail
Chr10:127315885 R3hdm2 within coordinates of
Tssr96215 1631 bp upstream
SNP A/G G G A G A G G G G A G A G A G G G G
rs214475299
MGI SNP Detail
Chr10:127315976 R3hdm2 within coordinates of
Tssr96215 1540 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs232387220
MGI SNP Detail
Chr10:127316057 R3hdm2 within coordinates of
Tssr96215 1459 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs248502061
MGI SNP Detail
Chr10:127316072 R3hdm2 within coordinates of
Tssr96215 1444 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47010903
MGI SNP Detail
Chr10:127316171 R3hdm2 within coordinates of
Tssr96215 1345 bp upstream
SNP G/T T T T T T T G T T T T T T T T
rs50805278
MGI SNP Detail
Chr10:127316205 R3hdm2 within coordinates of
Tssr96215 1311 bp upstream
SNP A/G A A A A A A G A A A G A A G A
rs48430681
MGI SNP Detail
Chr10:127316240 R3hdm2 within coordinates of
Tssr96215 1276 bp upstream
SNP A/T A A A A A T A A A T A A T A
rs224374863
MGI SNP Detail
Chr10:127316274 R3hdm2 within coordinates of
Tssr96215 1242 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249266775
MGI SNP Detail
Chr10:127316310 R3hdm2 within coordinates of
Tssr96215 1206 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs50653625
MGI SNP Detail
Chr10:127316334 R3hdm2 within coordinates of
Tssr96215 1182 bp upstream
SNP A/C A A A A A A C A A A A A A A A
rs221920386
MGI SNP Detail
Chr10:127316364 R3hdm2 within coordinates of
Tssr96215 1152 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs239615226
MGI SNP Detail
Chr10:127316370 R3hdm2 within coordinates of
Tssr96215 1146 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs255986525
MGI SNP Detail
Chr10:127316381 R3hdm2 within coordinates of
Tssr96215 1135 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs224988017
MGI SNP Detail
Chr10:127316391 R3hdm2 within coordinates of
Tssr96215 1125 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs241697691
MGI SNP Detail
Chr10:127316400 R3hdm2 within coordinates of
Tssr96215 1116 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51212323
MGI SNP Detail
Chr10:127316440 R3hdm2 within coordinates of
Tssr96215 1076 bp upstream
SNP A/G A A A A A A A A A G A A G A
rs231365745
MGI SNP Detail
Chr10:127316443 R3hdm2 within coordinates of
Tssr96215 1073 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs46459433
MGI SNP Detail
Chr10:127316497 R3hdm2 within coordinates of
Tssr96215 1019 bp upstream
SNP G/T G G G G G G T G G G G G G G G
rs51245303
MGI SNP Detail
Chr10:127316542 R3hdm2 within coordinates of
Tssr96215 974 bp upstream
SNP A/G A A A A A A G A A A A A A A A
rs51196401
MGI SNP Detail
Chr10:127316611 R3hdm2 within coordinates of
Rr218482 within coordinates of
Tssr96215 905 bp upstream
SNP A/G A A A A A G A A A A A A A A A
rs242611029
MGI SNP Detail
Chr10:127316618 R3hdm2 within coordinates of
Rr218482 within coordinates of
Tssr96215 898 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs213250068
MGI SNP Detail
Chr10:127316729 R3hdm2 within coordinates of
Rr218482 within coordinates of
Tssr96215 787 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs234799267
MGI SNP Detail
Chr10:127316761 R3hdm2 within coordinates of
Rr218482 within coordinates of
Tssr96215 755 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs29364536
MGI SNP Detail
Chr10:127316802 R3hdm2 within coordinates of
Rr218482 within coordinates of
Tssr96215 714 bp upstream
SNP A/C C C A C A C C C C C A C A C A C C C C
rs48821182
MGI SNP Detail
Chr10:127316812 R3hdm2 within coordinates of
Rr218482 within coordinates of
Tssr96215 704 bp upstream
SNP C/T C C C C C T C C C C C C C C T
rs29374147
MGI SNP Detail
Chr10:127316831 R3hdm2 within coordinates of
Rr218482 within coordinates of
Tssr96215 685 bp upstream
SNP C/T T C T T C T T
rs262102616
MGI SNP Detail
Chr10:127316866 R3hdm2 within coordinates of
Rr218482 within coordinates of
Tssr96215 650 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50807464
MGI SNP Detail
Chr10:127316915 R3hdm2 within coordinates of
Rr218482 within coordinates of
Tssr96215 601 bp upstream
SNP A/G A A A A A A G A A A A A A A A
rs239575379
MGI SNP Detail
Chr10:127316924 R3hdm2 within coordinates of
Rr218482 within coordinates of
Tssr96215 592 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249531628
MGI SNP Detail
Chr10:127316954 R3hdm2 within coordinates of
Rr218482 within coordinates of
Tssr96215 562 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs218754122
MGI SNP Detail
Chr10:127317009 R3hdm2 within coordinates of
Rr213570 within coordinates of
Rr218482 within coordinates of
Tssr96215 507 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250053188
MGI SNP Detail
Chr10:127317019 R3hdm2 within coordinates of
Rr213570 within coordinates of
Rr218482 within coordinates of
Tssr96215 497 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264421397
MGI SNP Detail
Chr10:127317065 R3hdm2 within coordinates of
Rr213570 within coordinates of
Rr218482 within coordinates of
Tssr96215 451 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231700987
MGI SNP Detail
Chr10:127317069 R3hdm2 within coordinates of
Rr213570 within coordinates of
Rr218482 within coordinates of
Tssr96215 447 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48219755
MGI SNP Detail
Chr10:127317122 R3hdm2 within coordinates of
Rr213570 within coordinates of
Rr218482 within coordinates of
Tssr96215 394 bp upstream
SNP C/G G G G G G G C G G G G G G G G
rs50559112
MGI SNP Detail
Chr10:127317213 R3hdm2 within coordinates of
Rr213570 within coordinates of
Rr218482 within coordinates of
Tssr96215 303 bp upstream
SNP A/C A A A C
rs225906325
MGI SNP Detail
Chr10:127317237 R3hdm2 within coordinates of
Rr213570 within coordinates of
Rr218482 within coordinates of
Tssr96215 279 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs242573942
MGI SNP Detail
Chr10:127317241 R3hdm2 within coordinates of
Rr213570 within coordinates of
Rr218482 within coordinates of
Tssr96215 275 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213124774
MGI SNP Detail
Chr10:127317243 R3hdm2 within coordinates of
Rr213570 within coordinates of
Rr218482 within coordinates of
Tssr96215 273 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs228759730
MGI SNP Detail
Chr10:127317265 R3hdm2 within coordinates of
Rr213570 within coordinates of
Rr218482 within coordinates of
Tssr96215 251 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs45726210
MGI SNP Detail
Chr10:127317308 R3hdm2 within coordinates of
Rr213570 within coordinates of
Rr218482 within coordinates of
Tssr96215 208 bp upstream
SNP A/G G G G G G G A G G G G G G G G
rs46342096
MGI SNP Detail
Chr10:127317332 R3hdm2 within coordinates of
Rr213570 within coordinates of
Rr218482 within coordinates of
Tssr96215 184 bp upstream
SNP C/T C C C C C T C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs51912841
MGI SNP Detail
Chr10:127317333 R3hdm2 within coordinates of
Rr213570 within coordinates of
Rr218482 within coordinates of
Tssr96215 183 bp upstream
SNP C/T C C C C C C T C C C C C C C C
rs29325269
MGI SNP Detail
Chr10:127317427 R3hdm2 within coordinates of
Rr218482 within coordinates of
Tssr96215 89 bp upstream
SNP C/T C T C C T C
rs214560898
MGI SNP Detail
Chr10:127317546 R3hdm2 within coordinates of
Rr218482 within coordinates of
Tssr96215 5 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs50783285
MGI SNP Detail
Chr10:127317762 R3hdm2 within coordinates of
Rr218482 within coordinates of
Tssr96215 221 bp downstream
SNP C/T T T T T T T C T T T C T T C T
rs250621931
MGI SNP Detail
Chr10:127317825 R3hdm2 within coordinates of
Rr218482 within coordinates of
Tssr96215 284 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218716930
MGI SNP Detail
Chr10:127317864 R3hdm2 within coordinates of
Rr218482 within coordinates of
Tssr96215 323 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs45715037
MGI SNP Detail
Chr10:127317891 R3hdm2 within coordinates of
Rr218482 within coordinates of
Tssr96215 350 bp downstream
SNP A/T A A A A A A T A A A T A A T A
rs49875381
MGI SNP Detail
Chr10:127318066 R3hdm2 within coordinates of
Tssr96215 525 bp downstream
SNP A/G G G G G G G G G G G A G G A G
rs224220007
MGI SNP Detail
Chr10:127318185 R3hdm2 within coordinates of
Tssr96215 644 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248511389
MGI SNP Detail
Chr10:127318356 R3hdm2 within coordinates of
Tssr96215 815 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs52030454
MGI SNP Detail
Chr10:127318473 R3hdm2 within coordinates of
Tssr96215 932 bp downstream
SNP A/G G G G G G G G G G G G G G A G
rs50316585
MGI SNP Detail
Chr10:127318680 R3hdm2 within coordinates of
Tssr96215 1139 bp downstream
SNP C/T C C C C C T C C C C C C C T
rs29329244
MGI SNP Detail
Chr10:127318793 R3hdm2 within coordinates of
Tssr96215 1252 bp downstream
SNP A/G G G A G A G G G G G A G A G A G G G G
rs49122602
MGI SNP Detail
Chr10:127318870 R3hdm2 within coordinates of
Tssr96215 1329 bp downstream
SNP A/G A A A A A A A A A A A A A G A
rs29361132
MGI SNP Detail
Chr10:127318960 R3hdm2 within coordinates of
Tssr96215 1419 bp downstream
SNP G/T G G T G T G G G G T G T G T G G G G
rs47735780
MGI SNP Detail
Chr10:127319030 R3hdm2 within coordinates of
Tssr96215 1489 bp downstream
SNP C/G G G G G G G G G G G C G G C G
rs265600405
MGI SNP Detail
Chr10:127319391 R3hdm2 within coordinates of
Tssr96215 1850 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232769781
MGI SNP Detail
Chr10:127319434 R3hdm2 within coordinates of
Tssr96215 1893 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255739432
MGI SNP Detail
Chr10:127319492 R3hdm2 within coordinates of
Tssr96215 1951 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs214427186
MGI SNP Detail
Chr10:127319522 R3hdm2 within coordinates of
Tssr96215 1981 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
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Showing SNP(s) 1 - 70 of 70

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory