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Mouse SNP Summary
Symbol
Name
ID 		Tssr96292
transcription start site region 96292
MGI:6024059

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Showing SNP(s) 1 - 55 of 55

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs226640500
MGI SNP Detail		 Chr10:127869254 Gm66417 within coordinates of
Tssr96292 1978 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs251839779
MGI SNP Detail		 Chr10:127869256 Gm66417 within coordinates of
Tssr96292 1976 bp upstream
 SNP C/T T C
rs262045833
MGI SNP Detail		 Chr10:127869287 Gm66417 within coordinates of
Tssr96292 1945 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234251142
MGI SNP Detail		 Chr10:127869325 Gm66417 within coordinates of
Tssr96292 1907 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs583428474
MGI SNP Detail		 Chr10:127869662 Gm66417 within coordinates of
Gm66418 within coordinates of
Tssr96292 1570 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A
rs587124757
MGI SNP Detail		 Chr10:127869701 Gm66417 within coordinates of
Gm66418 within coordinates of
Tssr96292 1531 bp upstream
 SNP A/G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs581556158
MGI SNP Detail		 Chr10:127869707 Gm66417 within coordinates of
Gm66418 within coordinates of
Tssr96292 1525 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs578632317
MGI SNP Detail		 Chr10:127869779 Gm66417 within coordinates of
Gm66418 within coordinates of
Tssr96292 1453 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs578940159
MGI SNP Detail		 Chr10:127869782 Gm66417 within coordinates of
Gm66418 within coordinates of
Tssr96292 1450 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579840937
MGI SNP Detail		 Chr10:127869801 Gm66417 within coordinates of
Gm66418 within coordinates of
Tssr96292 1431 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs583286618
MGI SNP Detail		 Chr10:127869914 Gm66417 within coordinates of
Tssr96292 1318 bp upstream
 SNP A/G G G G G G G G G G A G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G A
rs586829345
MGI SNP Detail		 Chr10:127870087 Gm66417 within coordinates of
Tssr96292 1145 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs580016622
MGI SNP Detail		 Chr10:127870092 Gm66417 within coordinates of
Tssr96292 1140 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs219265764
MGI SNP Detail		 Chr10:127870211 Gm66417 within coordinates of
Tssr96292 1021 bp upstream
 SNP A/G A G
rs584164108
MGI SNP Detail		 Chr10:127870258 Gm66417 within coordinates of
Tssr96292 974 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs587422467
MGI SNP Detail		 Chr10:127870264 Gm66417 within coordinates of
Tssr96292 968 bp upstream
 SNP A/G A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs580906924
MGI SNP Detail		 Chr10:127870386 Gm66417 within coordinates of
Tssr96292 846 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A C A A A A C A A A A A A A A A A A
rs253837178
MGI SNP Detail		 Chr10:127870729 Gm66417 within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 503 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217218751
MGI SNP Detail		 Chr10:127870785 Gm66417 within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 447 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs226854635
MGI SNP Detail		 Chr10:127870845 Gm66417 within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 387 bp upstream
 SNP A/C C C C C C C C C C C A A C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A
rs245965541
MGI SNP Detail		 Chr10:127870858 Gm66417 within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 374 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs213570135
MGI SNP Detail		 Chr10:127870889 Gm66417 within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 343 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236684176
MGI SNP Detail		 Chr10:127870908 Gm66417 within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 324 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs260595486
MGI SNP Detail		 Chr10:127870959 Gm66417 within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 273 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs212636115
MGI SNP Detail		 Chr10:127871142 Cpgi2380 within coordinates of
Gm66417 within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 90 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs241786608
MGI SNP Detail		 Chr10:127871163 Cpgi2380 within coordinates of
Gm66417 within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 69 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255571112
MGI SNP Detail		 Chr10:127871193 Cpgi2380 within coordinates of
Gm66417 within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 39 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs221251478
MGI SNP Detail		 Chr10:127871383 Cpgi2380 within coordinates of
Gm66417 within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 134 bp downstream
Tssr96293 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs244679768
MGI SNP Detail		 Chr10:127871468 Cpgi2380 within coordinates of
Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 219 bp downstream
 SNP C/G G C
rs251564156
MGI SNP Detail		 Chr10:127871501 Cpgi2380 within coordinates of
Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 252 bp downstream
Tssr96296 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs37196679
MGI SNP Detail		 Chr10:127871569 Cpgi2380 within coordinates of
Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 320 bp downstream
 SNP C/T T T T T T T T T T T T C T T C C T
rs36772376
MGI SNP Detail		 Chr10:127871636 Cpgi2380 within coordinates of
Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 387 bp downstream
 SNP A/G A A A A A A G A A A A A A A A
rs264877423
MGI SNP Detail		 Chr10:127871645 Cpgi2380 within coordinates of
Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 396 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233305545
MGI SNP Detail		 Chr10:127871738 Cpgi2380 within coordinates of
Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 489 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs37063275
MGI SNP Detail		 Chr10:127871777 Cpgi2380 within coordinates of
Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 528 bp downstream
 SNP C/T C C C C C T C C C C C C C C C
rs36287809
MGI SNP Detail		 Chr10:127871886 Cpgi2380 within coordinates of
Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 637 bp downstream
 SNP G/T G G G G G G G G G G G T G G T T G
rs37295109
MGI SNP Detail		 Chr10:127871913 Cpgi2380 within coordinates of
Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 664 bp downstream
 SNP C/T C C C C C C T C C C C C C C C
rs245841365
MGI SNP Detail		 Chr10:127872002 Cpgi2380 within coordinates of
Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 753 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213634795
MGI SNP Detail		 Chr10:127872026 Cpgi2380 within coordinates of
Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 777 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs36730152
MGI SNP Detail		 Chr10:127872081 Cpgi2380 within coordinates of
Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 832 bp downstream
 SNP C/T T T T T T T C T T T T C T T C C T
rs248887779
MGI SNP Detail		 Chr10:127872154 Cpgi2380 within coordinates of
Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 905 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs37817494
MGI SNP Detail		 Chr10:127872222 Cpgi2380 within coordinates of
Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 973 bp downstream
 SNP G/T T T T T T T G T T T T T T T T
rs583111092
MGI SNP Detail		 Chr10:127872251 Cpgi2380 within coordinates of
Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 1002 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36286498
MGI SNP Detail		 Chr10:127872542 Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 1293 bp downstream
 SNP A/T A A A A A A T A A A A A A A A
rs255045034
MGI SNP Detail		 Chr10:127872553 Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 1304 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214916118
MGI SNP Detail		 Chr10:127872560 Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 1311 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs37415910
MGI SNP Detail		 Chr10:127872641 Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 1392 bp downstream
 SNP C/G G G G G G G G G G G C G G G G
rs235095095
MGI SNP Detail		 Chr10:127872696 Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 1447 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs38009635
MGI SNP Detail		 Chr10:127872818 Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 1569 bp downstream
 SNP A/G A A A A A A G A A A A G A A G G A
rs223848358
MGI SNP Detail		 Chr10:127872959 Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 1710 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs37605219
MGI SNP Detail		 Chr10:127873052 Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 1803 bp downstream
 SNP A/G A A A A A A A A A A G A A A A
rs244469153
MGI SNP Detail		 Chr10:127873069 Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 1820 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs256405750
MGI SNP Detail		 Chr10:127873085 Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 1836 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36967260
MGI SNP Detail		 Chr10:127873089 Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 1840 bp downstream
 SNP A/G G G G G G G A G G G G A G G A A G
rs241580711
MGI SNP Detail		 Chr10:127873093 Naca within coordinates of
Rr224438 within coordinates of
Rr385474 within coordinates of
Tssr96292 1844 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory