About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Tssr96505
transcription start site region 96505
MGI:6024272

<< first < prev1 next > last >>
Showing SNP(s) 1 - 61 of 61

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239080671
MGI SNP Detail
Chr10:4335038 Tssr96505 1948 bp downstream
Zbtb2 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226689255
MGI SNP Detail
Chr10:4335125 Tssr96505 1861 bp downstream
Zbtb2 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs579166435
MGI SNP Detail
Chr10:4335213 Tssr96505 1773 bp downstream
Zbtb2 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs256119603
MGI SNP Detail
Chr10:4335339 Tssr96505 1647 bp downstream
Zbtb2 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238116328
MGI SNP Detail
Chr10:4335342 Tssr96505 1644 bp downstream
Zbtb2 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222681821
MGI SNP Detail
Chr10:4335506 Rr214906 within coordinates of
Tssr96505 1480 bp downstream
Zbtb2 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs264198265
MGI SNP Detail
Chr10:4335515 Rr214906 within coordinates of
Tssr96505 1471 bp downstream
Zbtb2 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C C T T T T T C T T T T T T T C T T T T
rs245128358
MGI SNP Detail
Chr10:4335522 Rr214906 within coordinates of
Tssr96505 1464 bp downstream
Zbtb2 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs225045327
MGI SNP Detail
Chr10:4335525 Rr214906 within coordinates of
Tssr96505 1461 bp downstream
Zbtb2 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs256919126
MGI SNP Detail
Chr10:4335617 Rr214906 within coordinates of
Tssr96505 1369 bp downstream
Zbtb2 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231944837
MGI SNP Detail
Chr10:4335625 Rr214906 within coordinates of
Tssr96505 1361 bp downstream
Zbtb2 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs217745409
MGI SNP Detail
Chr10:4335660 Rr214906 within coordinates of
Tssr96505 1326 bp downstream
Zbtb2 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs248643642
MGI SNP Detail
Chr10:4335666 Rr214906 within coordinates of
Tssr96505 1320 bp downstream
Zbtb2 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs580407893
MGI SNP Detail
Chr10:4335773 Rr214906 within coordinates of
Tssr96505 1213 bp downstream
Zbtb2 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs233983428
MGI SNP Detail
Chr10:4335894 Rr224739 within coordinates of
Tssr96505 1092 bp downstream
Zbtb2 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218654828
MGI SNP Detail
Chr10:4335955 Rr224739 within coordinates of
Tssr96505 1031 bp downstream
Zbtb2 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs260543398
MGI SNP Detail
Chr10:4336051 Rr224739 within coordinates of
Tssr96505 935 bp downstream
Zbtb2 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs580547424
MGI SNP Detail
Chr10:4336149 Rr224739 within coordinates of
Tssr96505 837 bp downstream
Zbtb2 within coordinates of
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs238208686
MGI SNP Detail
Chr10:4336198 Rr224739 within coordinates of
Tssr96505 788 bp downstream
Zbtb2 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217500096
MGI SNP Detail
Chr10:4336204 Rr224739 within coordinates of
Tssr96505 782 bp downstream
Zbtb2 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs245229713
MGI SNP Detail
Chr10:4336207 Rr224739 within coordinates of
Tssr96505 779 bp downstream
Zbtb2 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs226752725
MGI SNP Detail
Chr10:4336247 Rr224739 within coordinates of
Tssr96505 739 bp downstream
Zbtb2 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs256174295
MGI SNP Detail
Chr10:4336266 Rr224739 within coordinates of
Tssr96505 720 bp downstream
Zbtb2 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs244391561
MGI SNP Detail
Chr10:4336281 Rr224739 within coordinates of
Tssr96505 705 bp downstream
Zbtb2 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs234160546
MGI SNP Detail
Chr10:4336296 Rr224739 within coordinates of
Tssr96505 690 bp downstream
Zbtb2 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264441421
MGI SNP Detail
Chr10:4336336 Rr224739 within coordinates of
Tssr96505 650 bp downstream
Zbtb2 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs247779820
MGI SNP Detail
Chr10:4336348 Rr224739 within coordinates of
Tssr96505 638 bp downstream
Zbtb2 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224915975
MGI SNP Detail
Chr10:4336381 Rr224739 within coordinates of
Tssr96505 605 bp downstream
Zbtb2 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265044009
MGI SNP Detail
Chr10:4336500 Rr224739 within coordinates of
Tssr96505 486 bp downstream
Zbtb2 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs238241886
MGI SNP Detail
Chr10:4336514 Rr224739 within coordinates of
Tssr96505 472 bp downstream
Zbtb2 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs217798407
MGI SNP Detail
Chr10:4336553 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Tssr96505 433 bp downstream
Zbtb2 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs248687003
MGI SNP Detail
Chr10:4336588 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Tssr96505 398 bp downstream
Zbtb2 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs234038954
MGI SNP Detail
Chr10:4336589 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Tssr96505 397 bp downstream
Zbtb2 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226773931
MGI SNP Detail
Chr10:4336613 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Tssr96505 373 bp downstream
Zbtb2 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A
rs258283224
MGI SNP Detail
Chr10:4336674 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Tssr96505 312 bp downstream
Zbtb2 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C
rs240460998
MGI SNP Detail
Chr10:4336694 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Tssr96505 292 bp downstream
Zbtb2 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs217246039
MGI SNP Detail
Chr10:4336709 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Tssr96505 277 bp downstream
Zbtb2 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245289192
MGI SNP Detail
Chr10:4336738 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Tssr96505 248 bp downstream
Zbtb2 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs233187560
MGI SNP Detail
Chr10:4336745 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Tssr96505 241 bp downstream
Zbtb2 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs212288940
MGI SNP Detail
Chr10:4336781 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Tssr96505 205 bp downstream
Zbtb2 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244445954
MGI SNP Detail
Chr10:4336801 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Tssr96505 185 bp downstream
Zbtb2 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T T G G G G G T G G G G G G G T G G G G
rs233237582
MGI SNP Detail
Chr10:4336852 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Tssr96505 134 bp downstream
Zbtb2 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T C T T T T T T T C T T T T
rs587181805
MGI SNP Detail
Chr10:4336940 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Tssr96505 46 bp downstream
Zbtb2 within coordinates of
SNP C/T C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C
rs266163455
MGI SNP Detail
Chr10:4337567 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Tssr96505 572 bp upstream
Zbtb2 within coordinates of
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs252313472
MGI SNP Detail
Chr10:4337749 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Tssr96505 754 bp upstream
Zbtb2 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G
rs233103510
MGI SNP Detail
Chr10:4337791 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Tssr96505 796 bp upstream
Zbtb2 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs214890679
MGI SNP Detail
Chr10:4337833 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Tssr96505 838 bp upstream
Zbtb2 within coordinates of
SNP C/T C T
rs238300112
MGI SNP Detail
Chr10:4337881 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Tssr96505 886 bp upstream
Zbtb2 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C T T T T T T C T T T T T T T C T T T
rs582230166
MGI SNP Detail
Chr10:4338235 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Tssr96505 1240 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs584528265
MGI SNP Detail
Chr10:4338242 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Tssr96505 1247 bp upstream
SNP G/T T T T G T T T G G G G G G G G G G G G G G G G T G G T T G G G G G G G T G G G T G G T T G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217850350
MGI SNP Detail
Chr10:4338286 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Rr368917 within coordinates of
Tssr96505 1291 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254477740
MGI SNP Detail
Chr10:4338317 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Rr368917 within coordinates of
Tssr96505 1322 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs249875943
MGI SNP Detail
Chr10:4338330 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Rr368917 within coordinates of
Tssr96505 1335 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226373630
MGI SNP Detail
Chr10:4338453 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Rr368917 within coordinates of
Tssr96505 1458 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs262730090
MGI SNP Detail
Chr10:4338559 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Tssr96505 1564 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245934761
MGI SNP Detail
Chr10:4338587 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Tssr96505 1592 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225701198
MGI SNP Detail
Chr10:4338608 Cpgi1265 within coordinates of
Rr224739 within coordinates of
Tssr96505 1613 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251556512
MGI SNP Detail
Chr10:4338823 Rr224739 within coordinates of
Tssr96505 1828 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233265194
MGI SNP Detail
Chr10:4338842 Rr224739 within coordinates of
Tssr96505 1847 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212354305
MGI SNP Detail
Chr10:4338894 Rr224739 within coordinates of
Tssr96505 1899 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs250679573
MGI SNP Detail
Chr10:4338906 Rr224739 within coordinates of
Tssr96505 1911 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
<< first < prev1 next > last >>
Showing SNP(s) 1 - 61 of 61

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
12/17/2024
MGI 6.24
The Jackson Laboratory