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Mouse SNP Summary
Symbol
Name
ID 		Tssr98303
transcription start site region 98303
MGI:6026070

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265386429
MGI SNP Detail		 Chr10:78246893 Rrp1 within coordinates of
Tssr98303 1890 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs230433890
MGI SNP Detail		 Chr10:78246911 Rrp1 within coordinates of
Tssr98303 1872 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50932751
MGI SNP Detail		 Chr10:78246916 Rrp1 within coordinates of
Tssr98303 1867 bp downstream
 SNP A/G A A A A G G G
rs259348047
MGI SNP Detail		 Chr10:78246969 Rrp1 within coordinates of
Tssr98303 1814 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs6343897
MGI SNP Detail		 Chr10:78247154 Rrp1 within coordinates of
Tssr98303 1629 bp downstream
 SNP A/G G A
rs248174409
MGI SNP Detail		 Chr10:78247167 Rrp1 within coordinates of
Tssr98303 1616 bp downstream
 SNP A/G A A A A A G A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A G A G G A A A A A A A A
rs213037068
MGI SNP Detail		 Chr10:78247179 Rrp1 within coordinates of
Tssr98303 1604 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228255252
MGI SNP Detail		 Chr10:78247203 Rrp1 within coordinates of
Tssr98303 1580 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs251556002
MGI SNP Detail		 Chr10:78247207 Rrp1 within coordinates of
Tssr98303 1576 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs6344037
MGI SNP Detail		 Chr10:78247228 Rrp1 within coordinates of
Tssr98303 1555 bp downstream
 SNP A/G A G
rs233511250
MGI SNP Detail		 Chr10:78247231 Rrp1 within coordinates of
Tssr98303 1552 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251211473
MGI SNP Detail		 Chr10:78247396 Rrp1 within coordinates of
Tssr98303 1387 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217227492
MGI SNP Detail		 Chr10:78247403 Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 1380 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs234229770
MGI SNP Detail		 Chr10:78247505 Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 1278 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs248676425
MGI SNP Detail		 Chr10:78247507 Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 1276 bp downstream
 SNP A/G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G A A
rs220142069
MGI SNP Detail		 Chr10:78247510 Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 1273 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246628770
MGI SNP Detail		 Chr10:78247512 Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 1271 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs256716267
MGI SNP Detail		 Chr10:78247627 Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 1156 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs224792990
MGI SNP Detail		 Chr10:78247638 Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 1145 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108252152
MGI SNP Detail		 Chr10:78247660 Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 1123 bp downstream
 SNP A/G ? G ?
rs45774333
MGI SNP Detail		 Chr10:78247666 Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 1117 bp downstream
 SNP A/G G G A
rs241595103
MGI SNP Detail		 Chr10:78247875 Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 908 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259535935
MGI SNP Detail		 Chr10:78247908 Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 875 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229452563
MGI SNP Detail		 Chr10:78247935 Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 848 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242297067
MGI SNP Detail		 Chr10:78247940 Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 843 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264936911
MGI SNP Detail		 Chr10:78248026 Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 757 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227840296
MGI SNP Detail		 Chr10:78248085 Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 698 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256502258
MGI SNP Detail		 Chr10:78248126 Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 657 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs213806322
MGI SNP Detail		 Chr10:78248128 Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 655 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs227680529
MGI SNP Detail		 Chr10:78248130 Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 653 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245240820
MGI SNP Detail		 Chr10:78248140 Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 643 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580269698
MGI SNP Detail		 Chr10:78248173 Cpgi1780 within coordinates of
Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 610 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217321527
MGI SNP Detail		 Chr10:78248249 Cpgi1780 within coordinates of
Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 534 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234162124
MGI SNP Detail		 Chr10:78248305 Cpgi1780 within coordinates of
Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 478 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256114170
MGI SNP Detail		 Chr10:78248494 Cpgi1780 within coordinates of
Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 289 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs212105645
MGI SNP Detail		 Chr10:78248502 Cpgi1780 within coordinates of
Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 281 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236722800
MGI SNP Detail		 Chr10:78248553 Cpgi1780 within coordinates of
Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 230 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs261908056
MGI SNP Detail		 Chr10:78248564 Cpgi1780 within coordinates of
Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 219 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224657800
MGI SNP Detail		 Chr10:78248582 Cpgi1780 within coordinates of
Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 201 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs51801911
MGI SNP Detail		 Chr10:78248588 Cpgi1780 within coordinates of
Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 195 bp downstream
 SNP A/C A C A C A
rs253207821
MGI SNP Detail		 Chr10:78248605 Cpgi1780 within coordinates of
Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 178 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs223761085
MGI SNP Detail		 Chr10:78248645 Cpgi1780 within coordinates of
Rr225082 within coordinates of
Rrp1 within coordinates of
Tssr98303 138 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29340948
MGI SNP Detail		 Chr10:78248893 Cpgi1780 within coordinates of
Rr225082 within coordinates of
Tssr98303 38 bp upstream
 SNP A/C C C C A
rs242385596
MGI SNP Detail		 Chr10:78249018 Cpgi1780 within coordinates of
Rr225082 within coordinates of
Tssr98303 163 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262061445
MGI SNP Detail		 Chr10:78249136 Cpgi1780 within coordinates of
Rr225082 within coordinates of
Tssr98303 281 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs220436344
MGI SNP Detail		 Chr10:78249197 Cpgi1780 within coordinates of
Rr225082 within coordinates of
Tssr98303 342 bp upstream
 SNP A/C/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G C G G G G
rs244322417
MGI SNP Detail		 Chr10:78249205 Cpgi1780 within coordinates of
Rr225082 within coordinates of
Tssr98303 350 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265130990
MGI SNP Detail		 Chr10:78249213 Cpgi1780 within coordinates of
Rr225082 within coordinates of
Tssr98303 358 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs227621592
MGI SNP Detail		 Chr10:78249229 Cpgi1780 within coordinates of
Rr225082 within coordinates of
Tssr98303 374 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245370714
MGI SNP Detail		 Chr10:78249285 Rr225082 within coordinates of
Tssr98303 430 bp upstream
 SNP C/T C C C C C T C C T T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C T C T T C C C C C C T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259964725
MGI SNP Detail		 Chr10:78249329 Rr225082 within coordinates of
Tssr98303 474 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs228343627
MGI SNP Detail		 Chr10:78249376 Rr225082 within coordinates of
Tssr98303 521 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs586459609
MGI SNP Detail		 Chr10:78249421 Tssr98303 566 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs254180721
MGI SNP Detail		 Chr10:78249432 Tssr98303 577 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs580459458
MGI SNP Detail		 Chr10:78249493 Tssr98303 638 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs211921721
MGI SNP Detail		 Chr10:78249523 Tssr98303 668 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238944464
MGI SNP Detail		 Chr10:78249540 Tssr98303 685 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs250455815
MGI SNP Detail		 Chr10:78249570 Tssr98303 715 bp upstream
 SNP C/T T T T T T C T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T C T C C T T T T T T T T
rs215727834
MGI SNP Detail		 Chr10:78249619 Tssr98303 764 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233632347
MGI SNP Detail		 Chr10:78249650 Tssr98303 795 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs254898936
MGI SNP Detail		 Chr10:78249765 Tssr98303 910 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222342458
MGI SNP Detail		 Chr10:78249932 Tssr98303 1077 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs239834422
MGI SNP Detail		 Chr10:78249985 Tssr98303 1130 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs261796203
MGI SNP Detail		 Chr10:78250016 Tssr98303 1161 bp upstream
 SNP C/T C C C C C T C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C T C T T C C C C C C C C
rs220783273
MGI SNP Detail		 Chr10:78250033 Tssr98303 1178 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs247224671
MGI SNP Detail		 Chr10:78250097 Tssr98303 1242 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs262454572
MGI SNP Detail		 Chr10:78250100 Tssr98303 1245 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221532873
MGI SNP Detail		 Chr10:78250118 Tssr98303 1263 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239430178
MGI SNP Detail		 Chr10:78250179 Tssr98303 1324 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259900693
MGI SNP Detail		 Chr10:78250640 Tssr98303 1785 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 70 of 70
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory