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Mouse SNP Summary
Symbol
Name
ID 		Tssr98422
transcription start site region 98422
MGI:6026189

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Showing SNP(s) 1 - 48 of 48

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234234674
MGI SNP Detail		 Chr10:80156968 Tssr98422 1902 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs249059305
MGI SNP Detail		 Chr10:80156994 Tssr98422 1876 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs256253552
MGI SNP Detail		 Chr10:80157177 Pcsk4 within coordinates of
Tssr98422 1693 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225346430
MGI SNP Detail		 Chr10:80157190 Pcsk4 within coordinates of
Tssr98422 1680 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs245372490
MGI SNP Detail		 Chr10:80157224 Pcsk4 within coordinates of
Tssr98422 1646 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs3023239
MGI SNP Detail		 Chr10:80157328 Pcsk4 within coordinates of
Tssr98422 1542 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs236708603
MGI SNP Detail		 Chr10:80157334 Pcsk4 within coordinates of
Tssr98422 1536 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256788794
MGI SNP Detail		 Chr10:80157371 Pcsk4 within coordinates of
Tssr98422 1499 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216413980
MGI SNP Detail		 Chr10:80157411 Pcsk4 within coordinates of
Tssr98422 1459 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234058225
MGI SNP Detail		 Chr10:80157450 Pcsk4 within coordinates of
Tssr98422 1420 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253093633
MGI SNP Detail		 Chr10:80157601 Pcsk4 within coordinates of
Tssr98422 1269 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C
rs217884741
MGI SNP Detail		 Chr10:80157860 Pcsk4 within coordinates of
Tssr98422 1010 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230579385
MGI SNP Detail		 Chr10:80158049 Pcsk4 within coordinates of
Tssr98422 821 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257101534
MGI SNP Detail		 Chr10:80158096 Pcsk4 within coordinates of
Tssr98422 774 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223104635
MGI SNP Detail		 Chr10:80158099 Pcsk4 within coordinates of
Tssr98422 771 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs245359494
MGI SNP Detail		 Chr10:80158148 Pcsk4 within coordinates of
Tssr98422 722 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs265720916
MGI SNP Detail		 Chr10:80158160 Pcsk4 within coordinates of
Tssr98422 710 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222876593
MGI SNP Detail		 Chr10:80158380 Pcsk4 within coordinates of
Tssr98422 490 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs242900898
MGI SNP Detail		 Chr10:80158723 Cpgi1871 within coordinates of
Pcsk4 within coordinates of
Tssr98422 147 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs256173992
MGI SNP Detail		 Chr10:80158775 Cpgi1871 within coordinates of
Pcsk4 within coordinates of
Tssr98422 95 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225282349
MGI SNP Detail		 Chr10:80158952 Cpgi1871 within coordinates of
Pcsk4 within coordinates of
Tssr98422 72 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255601679
MGI SNP Detail		 Chr10:80158961 Cpgi1871 within coordinates of
Pcsk4 within coordinates of
Tssr98422 81 bp upstream
Tssr98424 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs262968080
MGI SNP Detail		 Chr10:80159016 Cpgi1871 within coordinates of
Pcsk4 within coordinates of
Tssr98422 136 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586258056
MGI SNP Detail		 Chr10:80159087 Cpgi1871 within coordinates of
Pcsk4 within coordinates of
Tssr98422 207 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs232520041
MGI SNP Detail		 Chr10:80159119 Cpgi1871 within coordinates of
Pcsk4 within coordinates of
Tssr98422 239 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251978718
MGI SNP Detail		 Chr10:80159150 Cpgi1871 within coordinates of
Pcsk4 within coordinates of
Tssr98422 270 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G C G G G G G G C G G G G G G C G G G G
rs216736335
MGI SNP Detail		 Chr10:80159158 Cpgi1871 within coordinates of
Pcsk4 within coordinates of
Tssr98422 278 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs233982015
MGI SNP Detail		 Chr10:80159184 Cpgi1871 within coordinates of
Pcsk4 within coordinates of
Tssr98422 304 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A G A A A A
rs247248893
MGI SNP Detail		 Chr10:80159242 Cpgi1871 within coordinates of
Pcsk4 within coordinates of
Tssr98422 362 bp upstream
Tssr98425 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G T G G G G G G T G G G G G G G G G G G
rs211836309
MGI SNP Detail		 Chr10:80159496 Cpgi1871 within coordinates of
Pcsk4 within coordinates of
Tssr98422 616 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T C C C C C C T C C C C C C C C C C C
rs230631998
MGI SNP Detail		 Chr10:80159660 Cpgi1871 within coordinates of
Pcsk4 within coordinates of
Tssr98422 780 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261920138
MGI SNP Detail		 Chr10:80159860 Pcsk4 within coordinates of
Tssr98422 980 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs223375688
MGI SNP Detail		 Chr10:80159932 Pcsk4 within coordinates of
Tssr98422 1052 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239903170
MGI SNP Detail		 Chr10:80159978 Pcsk4 within coordinates of
Tssr98422 1098 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259554751
MGI SNP Detail		 Chr10:80160019 Pcsk4 within coordinates of
Tssr98422 1139 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222784145
MGI SNP Detail		 Chr10:80160042 Pcsk4 within coordinates of
Tssr98422 1162 bp upstream
 SNP C/G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G C
rs242835901
MGI SNP Detail		 Chr10:80160389 Pcsk4 within coordinates of
Tssr98422 1509 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579654386
MGI SNP Detail		 Chr10:80160428 Pcsk4 within coordinates of
Tssr98422 1548 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265354399
MGI SNP Detail		 Chr10:80160445 Pcsk4 within coordinates of
Tssr98422 1565 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232009443
MGI SNP Detail		 Chr10:80160483 Pcsk4 within coordinates of
Tssr98422 1603 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs249663223
MGI SNP Detail		 Chr10:80160503 Pcsk4 within coordinates of
Tssr98422 1623 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs259409805
MGI SNP Detail		 Chr10:80160518 Pcsk4 within coordinates of
Tssr98422 1638 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T C T T T T T T C T T T T T T T T T T T
rs228040458
MGI SNP Detail		 Chr10:80160526 Pcsk4 within coordinates of
Tssr98422 1646 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs247121683
MGI SNP Detail		 Chr10:80160529 Pcsk4 within coordinates of
Tssr98422 1649 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs211850586
MGI SNP Detail		 Chr10:80160530 Pcsk4 within coordinates of
Tssr98422 1650 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224037061
MGI SNP Detail		 Chr10:80160581 Pcsk4 within coordinates of
Tssr98422 1701 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250604046
MGI SNP Detail		 Chr10:80160615 Pcsk4 within coordinates of
Tssr98422 1735 bp upstream
 SNP A/G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G A A
rs214950172
MGI SNP Detail		 Chr10:80160739 Pcsk4 within coordinates of
Tssr98422 1859 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
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Showing SNP(s) 1 - 48 of 48
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory