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Mouse SNP Summary
Symbol
Name
ID 		Tssr98622
transcription start site region 98622
MGI:6026389

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257651796
MGI SNP Detail		 Chr10:81315997 Celf5 within coordinates of
Tssr98622 1930 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220628812
MGI SNP Detail		 Chr10:81316013 Celf5 within coordinates of
Tssr98622 1914 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs240937606
MGI SNP Detail		 Chr10:81316034 Celf5 within coordinates of
Tssr98622 1893 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260294044
MGI SNP Detail		 Chr10:81316222 Celf5 within coordinates of
Tssr98622 1705 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233333428
MGI SNP Detail		 Chr10:81316229 Celf5 within coordinates of
Tssr98622 1698 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs260482331
MGI SNP Detail		 Chr10:81316434 Celf5 within coordinates of
Tssr98622 1493 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs264295461
MGI SNP Detail		 Chr10:81316652 Celf5 within coordinates of
Tssr98622 1275 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227898290
MGI SNP Detail		 Chr10:81316699 Celf5 within coordinates of
Tssr98622 1228 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs242746124
MGI SNP Detail		 Chr10:81316705 Celf5 within coordinates of
Tssr98622 1222 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs213387547
MGI SNP Detail		 Chr10:81316765 Celf5 within coordinates of
Tssr98622 1162 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs232105050
MGI SNP Detail		 Chr10:81316867 Celf5 within coordinates of
Tssr98622 1060 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs245200412
MGI SNP Detail		 Chr10:81316975 Celf5 within coordinates of
Rr435679 within coordinates of
Tssr98622 952 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217137912
MGI SNP Detail		 Chr10:81317007 Celf5 within coordinates of
Rr435679 within coordinates of
Tssr98622 920 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs239329432
MGI SNP Detail		 Chr10:81317009 Celf5 within coordinates of
Rr435679 within coordinates of
Tssr98622 918 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs264163160
MGI SNP Detail		 Chr10:81317032 Celf5 within coordinates of
Rr435679 within coordinates of
Tssr98622 895 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220622498
MGI SNP Detail		 Chr10:81317035 Celf5 within coordinates of
Rr435679 within coordinates of
Tssr98622 892 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230915550
MGI SNP Detail		 Chr10:81317053 Celf5 within coordinates of
Rr435679 within coordinates of
Tssr98622 874 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs580004422
MGI SNP Detail		 Chr10:81317140 Celf5 within coordinates of
Rr435679 within coordinates of
Tssr98622 787 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs251286771
MGI SNP Detail		 Chr10:81317151 Celf5 within coordinates of
Rr435679 within coordinates of
Tssr98622 776 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs220304280
MGI SNP Detail		 Chr10:81317381 Celf5 within coordinates of
Rr435679 within coordinates of
Tssr98622 546 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs240605168
MGI SNP Detail		 Chr10:81317448 Celf5 within coordinates of
Rr435679 within coordinates of
Tssr98622 479 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253916179
MGI SNP Detail		 Chr10:81317472 Celf5 within coordinates of
Rr435679 within coordinates of
Tssr98622 455 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226673144
MGI SNP Detail		 Chr10:81317520 Celf5 within coordinates of
Rr435679 within coordinates of
Tssr98622 407 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs248612052
MGI SNP Detail		 Chr10:81317683 Celf5 within coordinates of
Cpgi1992 within coordinates of
Rr435679 within coordinates of
Tssr98622 244 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs264733240
MGI SNP Detail		 Chr10:81317867 Celf5 within coordinates of
Cpgi1992 within coordinates of
Rr435679 within coordinates of
Tssr98622 60 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs227401130
MGI SNP Detail		 Chr10:81317894 Celf5 within coordinates of
Cpgi1992 within coordinates of
Rr435679 within coordinates of
Tssr98622 33 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236511666
MGI SNP Detail		 Chr10:81317902 Celf5 within coordinates of
Cpgi1992 within coordinates of
Rr435679 within coordinates of
Tssr98622 25 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255145596
MGI SNP Detail		 Chr10:81318099 Celf5 within coordinates of
Cpgi1992 within coordinates of
Rr435679 within coordinates of
Tssr98622 152 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225762534
MGI SNP Detail		 Chr10:81318193 Celf5 within coordinates of
Cpgi1992 within coordinates of
Rr435679 within coordinates of
Tssr98622 246 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs244990302
MGI SNP Detail		 Chr10:81318404 Celf5 within coordinates of
Cpgi1992 within coordinates of
Rr435679 within coordinates of
Tssr98622 457 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A G G G G G G A G G G G G G G G G G G G
rs216616948
MGI SNP Detail		 Chr10:81318751 Cpgi1992 within coordinates of
Rr435680 within coordinates of
Tssr98622 804 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs234090731
MGI SNP Detail		 Chr10:81318766 Cpgi1992 within coordinates of
Rr435680 within coordinates of
Tssr98622 819 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs254586400
MGI SNP Detail		 Chr10:81318767 Cpgi1992 within coordinates of
Rr435680 within coordinates of
Tssr98622 820 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs212134172
MGI SNP Detail		 Chr10:81318820 Cpgi1992 within coordinates of
Rr435680 within coordinates of
Tssr98622 873 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs230487367
MGI SNP Detail		 Chr10:81318822 Cpgi1992 within coordinates of
Rr435680 within coordinates of
Tssr98622 875 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs251339077
MGI SNP Detail		 Chr10:81318914 Cpgi1992 within coordinates of
Rr435680 within coordinates of
Tssr98622 967 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214582237
MGI SNP Detail		 Chr10:81319005 Rr435680 within coordinates of
Tssr98622 1058 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs233976612
MGI SNP Detail		 Chr10:81319056 Tssr98622 1109 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs263415187
MGI SNP Detail		 Chr10:81319074 Tssr98622 1127 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs226167558
MGI SNP Detail		 Chr10:81319097 Tssr98622 1150 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs251927418
MGI SNP Detail		 Chr10:81319120 Tssr98622 1173 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255755735
MGI SNP Detail		 Chr10:81319230 Tssr98622 1283 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs586343447
MGI SNP Detail		 Chr10:81319254 Tssr98622 1307 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C C C C C C C C C C
rs218865250
MGI SNP Detail		 Chr10:81319285 Tssr98622 1338 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs237864017
MGI SNP Detail		 Chr10:81319311 Tssr98622 1364 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs255117343
MGI SNP Detail		 Chr10:81319314 Tssr98622 1367 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs225894518
MGI SNP Detail		 Chr10:81319325 Tssr98622 1378 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs238851613
MGI SNP Detail		 Chr10:81319705 Tssr98622 1758 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs581524418
MGI SNP Detail		 Chr10:81319827 Tssr98622 1880 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs583807409
MGI SNP Detail		 Chr10:81319832 Tssr98622 1885 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T C T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs587097195
MGI SNP Detail		 Chr10:81319863 Rr435681 within coordinates of
Tssr98622 1916 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs581423957
MGI SNP Detail		 Chr10:81319866 Rr435681 within coordinates of
Tssr98622 1919 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585050920
MGI SNP Detail		 Chr10:81319881 Rr435681 within coordinates of
Tssr98622 1934 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C T C C C C C C C C C C C C
rs578665021
MGI SNP Detail		 Chr10:81319905 Rr435681 within coordinates of
Tssr98622 1958 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
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Showing SNP(s) 1 - 54 of 54
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory