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Mouse SNP Summary
Symbol
Name
ID 		Tssr99812
transcription start site region 99812
MGI:6027579

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Showing SNP(s) 1 - 38 of 38

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259198892
MGI SNP Detail		 Chr10:127497508 Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 1831 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218732834
MGI SNP Detail		 Chr10:127497588 Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 1751 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs38055634
MGI SNP Detail		 Chr10:127497742 Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 1597 bp downstream
 SNP A/G G G G G G G G G G G A G G G G
rs29314172
MGI SNP Detail		 Chr10:127497945 Nab2 within coordinates of
Rr224427 within coordinates of
Rr402332 within coordinates of
Tssr99812 1394 bp downstream
 SNP C/T T C
rs252799706
MGI SNP Detail		 Chr10:127497950 Nab2 within coordinates of
Rr224427 within coordinates of
Rr402332 within coordinates of
Tssr99812 1389 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213466873
MGI SNP Detail		 Chr10:127497960 Nab2 within coordinates of
Rr224427 within coordinates of
Rr402332 within coordinates of
Tssr99812 1379 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C G G C C C C C C C C C C C C C C
rs231915495
MGI SNP Detail		 Chr10:127498105 Nab2 within coordinates of
Rr224427 within coordinates of
Rr402332 within coordinates of
Tssr99812 1234 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C T T T C C C C C C C C C C C C C T
rs248439617
MGI SNP Detail		 Chr10:127498231 Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 1108 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs213142244
MGI SNP Detail		 Chr10:127498428 Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 911 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs239877802
MGI SNP Detail		 Chr10:127498470 Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 869 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs264404723
MGI SNP Detail		 Chr10:127498927 Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 412 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224556386
MGI SNP Detail		 Chr10:127499092 Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 247 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs249258811
MGI SNP Detail		 Chr10:127499116 Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 223 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251265281
MGI SNP Detail		 Chr10:127499209 Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 130 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs220483087
MGI SNP Detail		 Chr10:127499215 Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 124 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs237345351
MGI SNP Detail		 Chr10:127499337 Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 2 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255934758
MGI SNP Detail		 Chr10:127499367 Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 17 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs36804909
MGI SNP Detail		 Chr10:127499386 Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 36 bp upstream
 SNP G/T G G G G G G T G G G G G G G G
rs247433630
MGI SNP Detail		 Chr10:127499430 Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 80 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs29364755
MGI SNP Detail		 Chr10:127499591 Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 241 bp upstream
 SNP A/G G G A
rs36585068
MGI SNP Detail		 Chr10:127499818 Gm16229 within coordinates of
Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 468 bp upstream
 SNP C/T T T T T T T C T T T C T T T T
rs245715846
MGI SNP Detail		 Chr10:127499833 Gm16229 within coordinates of
Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 483 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255031948
MGI SNP Detail		 Chr10:127499886 Gm16229 within coordinates of
Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 536 bp upstream
 SNP C/T C T T T T T T T C T T T T T T T T T T C T T C T T T T C T T T C T C T T T T T T T T T T T T T T C T T T T
rs225886548
MGI SNP Detail		 Chr10:127499916 Gm16229 within coordinates of
Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 566 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242080778
MGI SNP Detail		 Chr10:127500007 Gm16229 within coordinates of
Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 657 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213186376
MGI SNP Detail		 Chr10:127500013 Gm16229 within coordinates of
Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 663 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs242460049
MGI SNP Detail		 Chr10:127500021 Gm16229 within coordinates of
Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 671 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254951835
MGI SNP Detail		 Chr10:127500042 Gm16229 within coordinates of
Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 692 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216710086
MGI SNP Detail		 Chr10:127500050 Gm16229 within coordinates of
Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 700 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs239052488
MGI SNP Detail		 Chr10:127500137 Gm16229 within coordinates of
Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 787 bp upstream
 SNP A/G G A A A A A A A G A A A A A A A A A A G A A G A A A A G A A A G A G A A A A A A A A A A A A A A A A A A
rs36252290
MGI SNP Detail		 Chr10:127500272 Gm16229 within coordinates of
Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 922 bp upstream
 SNP C/T C C C C C C T C C C C C C C C
rs220302853
MGI SNP Detail		 Chr10:127500407 Gm16229 within coordinates of
Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 1057 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs230056366
MGI SNP Detail		 Chr10:127500426 Gm16229 within coordinates of
Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 1076 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250582528
MGI SNP Detail		 Chr10:127500599 Gm16229 within coordinates of
Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 1249 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225932352
MGI SNP Detail		 Chr10:127500614 Gm16229 within coordinates of
Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 1264 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250017497
MGI SNP Detail		 Chr10:127501159 Gm16229 within coordinates of
Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 1809 bp upstream
 SNP A/G A G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G
rs264361726
MGI SNP Detail		 Chr10:127501317 Gm16229 within coordinates of
Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 1967 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224180624
MGI SNP Detail		 Chr10:127501343 Gm16229 within coordinates of
Nab2 within coordinates of
Rr224427 within coordinates of
Tssr99812 1993 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 38 of 38
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory