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Mouse SNP Summary
Symbol
Name
ID 		Tssr99857
transcription start site region 99857
MGI:6027624

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Showing SNP(s) 1 - 69 of 69

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222657765
MGI SNP Detail		 Chr10:128202969 Coq10a within coordinates of
Tssr99857 1982 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs242613925
MGI SNP Detail		 Chr10:128202974 Coq10a within coordinates of
Tssr99857 1977 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs258990963
MGI SNP Detail		 Chr10:128203002 Coq10a within coordinates of
Tssr99857 1949 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs587558183
MGI SNP Detail		 Chr10:128203028 Coq10a within coordinates of
Tssr99857 1923 bp downstream
 SNP G/T G G G G G G G G G T G G G G G G G G G G G G T G G G G T T G G G G T G T G G G G T G G G T G G T G G G G G
rs221722994
MGI SNP Detail		 Chr10:128203030 Coq10a within coordinates of
Tssr99857 1921 bp downstream
 SNP A/G/T A A A A A A A A A G A A A A A A A A A T A A G A A A A G G A A A A G A G A A A A G A A A G A A G T A A A A
rs582968952
MGI SNP Detail		 Chr10:128203034 Coq10a within coordinates of
Tssr99857 1917 bp downstream
 SNP A/T T T T T T T T T T A T T T T T T T T T T T T A T T T T A A T T T T A T A T T T T A T T T A T T A T T T T T
rs250517350
MGI SNP Detail		 Chr10:128203040 Coq10a within coordinates of
Tssr99857 1911 bp downstream
 SNP C/T C T
rs213742523
MGI SNP Detail		 Chr10:128203064 Coq10a within coordinates of
Tssr99857 1887 bp downstream
 SNP A/G G A
rs230815800
MGI SNP Detail		 Chr10:128203125 Coq10a within coordinates of
Tssr99857 1826 bp downstream
 SNP A/T T A
rs265235777
MGI SNP Detail		 Chr10:128203166 Coq10a within coordinates of
Tssr99857 1785 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227272308
MGI SNP Detail		 Chr10:128203176 Coq10a within coordinates of
Tssr99857 1775 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs253585814
MGI SNP Detail		 Chr10:128203193 Coq10a within coordinates of
Tssr99857 1758 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs264187940
MGI SNP Detail		 Chr10:128203221 Coq10a within coordinates of
Tssr99857 1730 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs248512680
MGI SNP Detail		 Chr10:128203222 Coq10a within coordinates of
Tssr99857 1729 bp downstream
 SNP A/T A T
rs227665024
MGI SNP Detail		 Chr10:128203223 Coq10a within coordinates of
Tssr99857 1728 bp downstream
 SNP G/T T G
rs247799130
MGI SNP Detail		 Chr10:128203261 Coq10a within coordinates of
Tssr99857 1690 bp downstream
 SNP A/G A G
rs586580331
MGI SNP Detail		 Chr10:128203277 Coq10a within coordinates of
Tssr99857 1674 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs231699515
MGI SNP Detail		 Chr10:128203321 Coq10a within coordinates of
Tssr99857 1630 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs251682489
MGI SNP Detail		 Chr10:128203366 Coq10a within coordinates of
Tssr99857 1585 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212469156
MGI SNP Detail		 Chr10:128203451 Coq10a within coordinates of
Rr224459 within coordinates of
Tssr99857 1500 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263515773
MGI SNP Detail		 Chr10:128203546 Coq10a within coordinates of
Rr224459 within coordinates of
Tssr99857 1405 bp downstream
 SNP C/T T C
rs263800237
MGI SNP Detail		 Chr10:128203592 Coq10a within coordinates of
Rr224459 within coordinates of
Tssr99857 1359 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs222615543
MGI SNP Detail		 Chr10:128203646 Coq10a within coordinates of
Rr224459 within coordinates of
Tssr99857 1305 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs223951214
MGI SNP Detail		 Chr10:128203692 Coq10a within coordinates of
Rr224459 within coordinates of
Tssr99857 1259 bp downstream
 SNP C/T C T
rs252842796
MGI SNP Detail		 Chr10:128203750 Coq10a within coordinates of
Rr224459 within coordinates of
Tssr99857 1201 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221682163
MGI SNP Detail		 Chr10:128203775 Coq10a within coordinates of
Rr224459 within coordinates of
Tssr99857 1176 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239508162
MGI SNP Detail		 Chr10:128203781 Coq10a within coordinates of
Rr224459 within coordinates of
Tssr99857 1170 bp downstream
 SNP A/G G A
rs257355790
MGI SNP Detail		 Chr10:128203801 Coq10a within coordinates of
Rr224459 within coordinates of
Tssr99857 1150 bp downstream
 SNP A/G A G
rs219824861
MGI SNP Detail		 Chr10:128203846 Coq10a within coordinates of
Rr224459 within coordinates of
Tssr99857 1105 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T
rs241727812
MGI SNP Detail		 Chr10:128203893 Coq10a within coordinates of
Rr224459 within coordinates of
Tssr99857 1058 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs224655696
MGI SNP Detail		 Chr10:128203951 Coq10a within coordinates of
Rr224459 within coordinates of
Tssr99857 1000 bp downstream
 SNP G/T T G
rs228967833
MGI SNP Detail		 Chr10:128203988 Coq10a within coordinates of
Cpgi2395 within coordinates of
Rr224459 within coordinates of
Tssr99857 963 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245599021
MGI SNP Detail		 Chr10:128204101 Coq10a within coordinates of
Cpgi2395 within coordinates of
Rr224459 within coordinates of
Tssr99857 850 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs258557198
MGI SNP Detail		 Chr10:128204143 Coq10a within coordinates of
Cpgi2395 within coordinates of
Rr224459 within coordinates of
Tssr99857 808 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs225549730
MGI SNP Detail		 Chr10:128204376 Coq10a within coordinates of
Cpgi2395 within coordinates of
Rr224459 within coordinates of
Tssr99857 575 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256616134
MGI SNP Detail		 Chr10:128204529 Coq10a within coordinates of
Cpgi2395 within coordinates of
Rr224459 within coordinates of
Tssr99857 422 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs212168830
MGI SNP Detail		 Chr10:128204575 Coq10a within coordinates of
Cpgi2395 within coordinates of
Rr224459 within coordinates of
Tssr99857 376 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs584611447
MGI SNP Detail		 Chr10:128204609 Coq10a within coordinates of
Cpgi2395 within coordinates of
Rr224459 within coordinates of
Tssr99857 342 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs237422168
MGI SNP Detail		 Chr10:128204684 Coq10a within coordinates of
Cpgi2395 within coordinates of
Rr224459 within coordinates of
Tssr99857 267 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254120295
MGI SNP Detail		 Chr10:128204831 Coq10a within coordinates of
Cpgi2395 within coordinates of
Rr224459 within coordinates of
Rr369103 within coordinates of
Tssr99856 within coordinates of
Tssr99857 120 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217473170
MGI SNP Detail		 Chr10:128204849 Coq10a within coordinates of
Cpgi2395 within coordinates of
Rr224459 within coordinates of
Rr369103 within coordinates of
Tssr99856 within coordinates of
Tssr99857 102 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234066281
MGI SNP Detail		 Chr10:128205114 Cpgi2395 within coordinates of
Rr224459 within coordinates of
Tssr99857 144 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs252802454
MGI SNP Detail		 Chr10:128205248 Cpgi2395 within coordinates of
Rr224459 within coordinates of
Tssr99857 278 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221817953
MGI SNP Detail		 Chr10:128205307 Rr224459 within coordinates of
Tssr99857 337 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236034463
MGI SNP Detail		 Chr10:128205393 Rr224459 within coordinates of
Tssr99857 423 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262389445
MGI SNP Detail		 Chr10:128205474 Rr224459 within coordinates of
Tssr99857 504 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs220261275
MGI SNP Detail		 Chr10:128205478 Rr224459 within coordinates of
Tssr99857 508 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs244739493
MGI SNP Detail		 Chr10:128205624 Rr224459 within coordinates of
Tssr99857 654 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs252494201
MGI SNP Detail		 Chr10:128205651 Rr224459 within coordinates of
Tssr99857 681 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222378671
MGI SNP Detail		 Chr10:128205690 Rr224459 within coordinates of
Tssr99857 720 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238869707
MGI SNP Detail		 Chr10:128205764 Rr224459 within coordinates of
Tssr99857 794 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs258456297
MGI SNP Detail		 Chr10:128205876 Tssr99857 906 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230689025
MGI SNP Detail		 Chr10:128205916 Tssr99857 946 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244428150
MGI SNP Detail		 Chr10:128205947 Tssr99857 977 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs387543724
MGI SNP Detail		 Chr10:128206002 Tssr99857 1032 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs264718147
MGI SNP Detail		 Chr10:128206012 Tssr99857 1042 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229197230
MGI SNP Detail		 Chr10:128206035 Tssr99857 1065 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259356680
MGI SNP Detail		 Chr10:128206171 Tssr99857 1201 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs217642969
MGI SNP Detail		 Chr10:128206303 Tssr99857 1333 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs580337856
MGI SNP Detail		 Chr10:128206465 Tssr99857 1495 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227361089
MGI SNP Detail		 Chr10:128206473 Tssr99857 1503 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579345063
MGI SNP Detail		 Chr10:128206568 Tssr99857 1598 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247316425
MGI SNP Detail		 Chr10:128206661 Tssr99857 1691 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs215851114
MGI SNP Detail		 Chr10:128206734 Tssr99857 1764 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238064052
MGI SNP Detail		 Chr10:128206759 Tssr99857 1789 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257874111
MGI SNP Detail		 Chr10:128206786 Tssr99857 1816 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs212045935
MGI SNP Detail		 Chr10:128206867 Tssr99857 1897 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs235391985
MGI SNP Detail		 Chr10:128206888 Tssr99857 1918 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs387219215
MGI SNP Detail		 Chr10:128206907 Tssr99857 1937 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G
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Showing SNP(s) 1 - 69 of 69
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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