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Mouse SNP Summary
Symbol
Name
ID 		Tssr100216
transcription start site region 100216
MGI:6027983

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258454236
MGI SNP Detail		 Chr11:5826386 Gm53664 within coordinates of
Pold2 within coordinates of
Tssr100216 1982 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs26914606
MGI SNP Detail		 Chr11:5826398 Gm53664 within coordinates of
Pold2 within coordinates of
Tssr100216 1970 bp upstream
 SNP A/C A C A A C C A A C A C A A A A A
rs244480891
MGI SNP Detail		 Chr11:5826406 Gm53664 within coordinates of
Pold2 within coordinates of
Tssr100216 1962 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264098535
MGI SNP Detail		 Chr11:5826505 Gm53664 within coordinates of
Pold2 within coordinates of
Tssr100216 1863 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs29405834
MGI SNP Detail		 Chr11:5826520 Gm53664 within coordinates of
Pold2 within coordinates of
Tssr100216 1848 bp upstream
 SNP A/G A G G A G
rs252165189
MGI SNP Detail		 Chr11:5826676 Gm53664 within coordinates of
Pold2 within coordinates of
Tssr100216 1692 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs216966813
MGI SNP Detail		 Chr11:5826890 Gm53664 within coordinates of
Pold2 within coordinates of
Tssr100216 1478 bp upstream
Tssr106653 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs26914605
MGI SNP Detail		 Chr11:5826923 Gm53664 within coordinates of
Pold2 within coordinates of
Tssr100216 1445 bp upstream
 SNP C/T T C C C C C C C C C T C
rs244542583
MGI SNP Detail		 Chr11:5826924 Gm53664 within coordinates of
Pold2 within coordinates of
Tssr100216 1444 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs582764133
MGI SNP Detail		 Chr11:5826974 Gm53664 within coordinates of
Pold2 within coordinates of
Tssr100216 1394 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs211782459
MGI SNP Detail		 Chr11:5827046 Gm53664 within coordinates of
Pold2 within coordinates of
Tssr100216 1322 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs230409310
MGI SNP Detail		 Chr11:5827072 Gm53664 within coordinates of
Pold2 within coordinates of
Tssr100216 1296 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263665934
MGI SNP Detail		 Chr11:5827203 Gm53664 within coordinates of
Pold2 within coordinates of
Tssr100216 1165 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs226461704
MGI SNP Detail		 Chr11:5827209 Gm53664 within coordinates of
Pold2 within coordinates of
Tssr100216 1159 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239642677
MGI SNP Detail		 Chr11:5827228 Gm53664 within coordinates of
Pold2 within coordinates of
Tssr100216 1140 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T
rs258921699
MGI SNP Detail		 Chr11:5827252 Gm53664 within coordinates of
Pold2 within coordinates of
Tssr100216 1116 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225527809
MGI SNP Detail		 Chr11:5827254 Gm53664 within coordinates of
Pold2 within coordinates of
Tssr100216 1114 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs239326625
MGI SNP Detail		 Chr11:5827354 Gm53664 within coordinates of
Pold2 within coordinates of
Tssr100216 1014 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258679844
MGI SNP Detail		 Chr11:5827463 Gm53664 within coordinates of
Pold2 within coordinates of
Rr442177 within coordinates of
Tssr100216 905 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218249843
MGI SNP Detail		 Chr11:5827470 Gm53664 within coordinates of
Pold2 within coordinates of
Rr442177 within coordinates of
Tssr100216 898 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238162312
MGI SNP Detail		 Chr11:5827475 Gm53664 within coordinates of
Pold2 within coordinates of
Rr442177 within coordinates of
Tssr100216 893 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs586350235
MGI SNP Detail		 Chr11:5827521 Gm53664 within coordinates of
Pold2 within coordinates of
Rr442177 within coordinates of
Tssr100216 847 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580261692
MGI SNP Detail		 Chr11:5827530 Gm53664 within coordinates of
Pold2 within coordinates of
Rr442177 within coordinates of
Tssr100216 838 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs583599295
MGI SNP Detail		 Chr11:5827531 Gm53664 within coordinates of
Pold2 within coordinates of
Rr442177 within coordinates of
Tssr100216 837 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs265935823
MGI SNP Detail		 Chr11:5827596 Gm53664 within coordinates of
Pold2 within coordinates of
Rr442177 within coordinates of
Tssr100216 772 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234047591
MGI SNP Detail		 Chr11:5827603 Gm53664 within coordinates of
Pold2 within coordinates of
Rr442177 within coordinates of
Tssr100216 765 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257414619
MGI SNP Detail		 Chr11:5827652 Gm53664 within coordinates of
Pold2 within coordinates of
Rr442177 within coordinates of
Tssr100216 716 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585861779
MGI SNP Detail		 Chr11:5827667 Gm53664 within coordinates of
Pold2 within coordinates of
Rr442177 within coordinates of
Tssr100216 701 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs263531001
MGI SNP Detail		 Chr11:5827780 Gm53664 within coordinates of
Pold2 within coordinates of
Rr442177 within coordinates of
Tssr100216 588 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T T T T T T T T T T A T T T T
rs225140359
MGI SNP Detail		 Chr11:5827781 Gm53664 within coordinates of
Pold2 within coordinates of
Rr442177 within coordinates of
Tssr100216 587 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C C C C C C C C C T C C C C
rs244570919
MGI SNP Detail		 Chr11:5827799 Gm53664 within coordinates of
Pold2 within coordinates of
Rr442177 within coordinates of
Tssr100216 569 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C C C C C C C C C T C C C C
rs212017094
MGI SNP Detail		 Chr11:5828002 Cpgi2545 within coordinates of
Gm53664 within coordinates of
Pold2 within coordinates of
Rr442177 within coordinates of
Tssr100216 366 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A A A A A A A A A A A A A A A A C A A A A
rs230667886
MGI SNP Detail		 Chr11:5828020 Cpgi2545 within coordinates of
Gm53664 within coordinates of
Pold2 within coordinates of
Rr442177 within coordinates of
Tssr100216 348 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs26914604
MGI SNP Detail		 Chr11:5828030 Cpgi2545 within coordinates of
Gm53664 within coordinates of
Pold2 within coordinates of
Rr442177 within coordinates of
Tssr100216 338 bp upstream
 SNP G/T G G T G G
rs26914603
MGI SNP Detail		 Chr11:5828031 Cpgi2545 within coordinates of
Gm53664 within coordinates of
Pold2 within coordinates of
Rr442177 within coordinates of
Tssr100216 337 bp upstream
 SNP A/G A A A G G G G G G A A A A A
rs237700464
MGI SNP Detail		 Chr11:5828037 Cpgi2545 within coordinates of
Gm53664 within coordinates of
Pold2 within coordinates of
Rr442177 within coordinates of
Tssr100216 331 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263216057
MGI SNP Detail		 Chr11:5828038 Cpgi2545 within coordinates of
Gm53664 within coordinates of
Pold2 within coordinates of
Rr442177 within coordinates of
Tssr100216 330 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216224234
MGI SNP Detail		 Chr11:5828047 Cpgi2545 within coordinates of
Gm53664 within coordinates of
Pold2 within coordinates of
Rr442177 within coordinates of
Tssr100216 321 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs232091733
MGI SNP Detail		 Chr11:5828092 Cpgi2545 within coordinates of
Gm53664 within coordinates of
Pold2 within coordinates of
Rr442177 within coordinates of
Tssr100216 276 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A A A A A A A A A A A A
rs223366666
MGI SNP Detail		 Chr11:5828142 Cpgi2545 within coordinates of
Gm53664 within coordinates of
Pold2 within coordinates of
Rr442177 within coordinates of
Tssr100216 226 bp upstream
 SNP C/G C G
rs218503143
MGI SNP Detail		 Chr11:5828219 Cpgi2545 within coordinates of
Gm53664 within coordinates of
Pold2 within coordinates of
Rr402404 within coordinates of
Rr442177 within coordinates of
Tssr100216 149 bp upstream
Tssr106654 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T T T T T T C T T T T
rs247219546
MGI SNP Detail		 Chr11:5828222 Cpgi2545 within coordinates of
Gm53664 within coordinates of
Pold2 within coordinates of
Rr402404 within coordinates of
Rr442177 within coordinates of
Tssr100216 146 bp upstream
Tssr106654 within coordinates of
 SNP G/T T G
rs260332824
MGI SNP Detail		 Chr11:5828238 Cpgi2545 within coordinates of
Gm53664 within coordinates of
Pold2 within coordinates of
Rr402404 within coordinates of
Rr442177 within coordinates of
Tssr100216 130 bp upstream
Tssr106654 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227256962
MGI SNP Detail		 Chr11:5828312 Cpgi2545 within coordinates of
Gm53664 within coordinates of
Rr402404 within coordinates of
Rr442178 within coordinates of
Tssr100216 56 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245551522
MGI SNP Detail		 Chr11:5828431 Cpgi2545 within coordinates of
Gm53664 within coordinates of
Rr402404 within coordinates of
Rr442178 within coordinates of
Tssr100216 54 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265755579
MGI SNP Detail		 Chr11:5828461 Cpgi2545 within coordinates of
Gm53664 within coordinates of
Rr442178 within coordinates of
Tssr100216 84 bp downstream
 SNP C/G/T T T T T T T T T T T T T T T T T T T T C T T G T T T T G T T T T T T T T T T T T T T T T T T T T T T T
rs225181861
MGI SNP Detail		 Chr11:5828471 Cpgi2545 within coordinates of
Gm53664 within coordinates of
Rr442178 within coordinates of
Tssr100216 94 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238279044
MGI SNP Detail		 Chr11:5828479 Cpgi2545 within coordinates of
Gm53664 within coordinates of
Rr442178 within coordinates of
Tssr100216 102 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T T T T T T T C T T T T
rs253757357
MGI SNP Detail		 Chr11:5828489 Cpgi2545 within coordinates of
Gm53664 within coordinates of
Rr442178 within coordinates of
Tssr100216 112 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs224341813
MGI SNP Detail		 Chr11:5828548 Cpgi2545 within coordinates of
Gm53664 within coordinates of
Rr442178 within coordinates of
Tssr100216 171 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259171400
MGI SNP Detail		 Chr11:5828562 Cpgi2545 within coordinates of
Gm53664 within coordinates of
Rr442178 within coordinates of
Tssr100216 185 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C C C C C C C C T C C C C
rs218786128
MGI SNP Detail		 Chr11:5828721 Gm53664 within coordinates of
Rr442178 within coordinates of
Tssr100216 344 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A A A A A A A A A A A A A A A A T A A A A
rs231723882
MGI SNP Detail		 Chr11:5828850 Gm53664 within coordinates of
Tssr100216 473 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs252962328
MGI SNP Detail		 Chr11:5828858 Gm53664 within coordinates of
Tssr100216 481 bp downstream
 SNP A/T T T T T T T T T T A T T T T T T T T T A T A A T T A T A T T T T T T T T T A T T T T T T T T A T A T A T T
rs213460639
MGI SNP Detail		 Chr11:5828887 Gm53664 within coordinates of
Tssr100216 510 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs232479059
MGI SNP Detail		 Chr11:5828908 Gm53664 within coordinates of
Tssr100216 531 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs252325707
MGI SNP Detail		 Chr11:5828947 Gm53664 within coordinates of
Tssr100216 570 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212297249
MGI SNP Detail		 Chr11:5828954 Gm53664 within coordinates of
Tssr100216 577 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T
rs235843609
MGI SNP Detail		 Chr11:5828971 Gm53664 within coordinates of
Tssr100216 594 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs263973261
MGI SNP Detail		 Chr11:5829121 Gm53664 within coordinates of
Tssr100216 744 bp downstream
 SNP A/G G G G G G G G G G A G G G G G G G G G A G A A G G A G A G G G G G G G G G A G G G G G G G G A G A G A G G
rs226824536
MGI SNP Detail		 Chr11:5829410 Gm53664 within coordinates of
Tssr100216 1033 bp downstream
 SNP A/C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T T T T T T T T T A T T T T
rs247872831
MGI SNP Detail		 Chr11:5829538 Gm53664 within coordinates of
Tssr100216 1161 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs251983614
MGI SNP Detail		 Chr11:5829565 Gm53664 within coordinates of
Tssr100216 1188 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs219527462
MGI SNP Detail		 Chr11:5829575 Gm53664 within coordinates of
Tssr100216 1198 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs238500664
MGI SNP Detail		 Chr11:5829652 Gm53664 within coordinates of
Tssr100216 1275 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs253791710
MGI SNP Detail		 Chr11:5829779 Gm53664 within coordinates of
Tssr100216 1402 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224212387
MGI SNP Detail		 Chr11:5829931 Gm53664 within coordinates of
Rr442179 within coordinates of
Tssr100216 1554 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs247461017
MGI SNP Detail		 Chr11:5829934 Gm53664 within coordinates of
Rr442179 within coordinates of
Tssr100216 1557 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs266127225
MGI SNP Detail		 Chr11:5829954 Gm53664 within coordinates of
Rr442179 within coordinates of
Tssr100216 1577 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs231607054
MGI SNP Detail		 Chr11:5829977 Gm53664 within coordinates of
Rr442179 within coordinates of
Tssr100216 1600 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs579713006
MGI SNP Detail		 Chr11:5829997 Gm53664 within coordinates of
Rr442179 within coordinates of
Tssr100216 1620 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257876315
MGI SNP Detail		 Chr11:5830058 Gm53664 within coordinates of
Rr442179 within coordinates of
Tssr100216 1681 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs213302178
MGI SNP Detail		 Chr11:5830072 Gm53664 within coordinates of
Rr442179 within coordinates of
Tssr100216 1695 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G G G G G G G G G T G G G G
rs226355936
MGI SNP Detail		 Chr11:5830089 Gm53664 within coordinates of
Rr442179 within coordinates of
Tssr100216 1712 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs243311562
MGI SNP Detail		 Chr11:5830110 Gm53664 within coordinates of
Rr442179 within coordinates of
Rr442180 within coordinates of
Tssr100216 1733 bp downstream
 SNP C/T C C C C C C C C C T C C C C C C C C C C C T C C C T C C C C C C C C C C C T C C C C C C C C T C C C T C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212383191
MGI SNP Detail		 Chr11:5830137 Gm53664 within coordinates of
Rr442179 within coordinates of
Tssr100216 1760 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237460766
MGI SNP Detail		 Chr11:5830156 Gm53664 within coordinates of
Rr442179 within coordinates of
Tssr100216 1779 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs586387871
MGI SNP Detail		 Chr11:5830227 Gm53664 within coordinates of
Rr442179 within coordinates of
Tssr100216 1850 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C C C C C C C C C A C C C C
rs254309534
MGI SNP Detail		 Chr11:5830240 Gm53664 within coordinates of
Rr442179 within coordinates of
Tssr100216 1863 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs219599232
MGI SNP Detail		 Chr11:5830245 Gm53664 within coordinates of
Rr442179 within coordinates of
Tssr100216 1868 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T
rs238216736
MGI SNP Detail		 Chr11:5830277 Gm53664 within coordinates of
Tssr100216 1900 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs252016436
MGI SNP Detail		 Chr11:5830296 Gm53664 within coordinates of
Tssr100216 1919 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs219398410
MGI SNP Detail		 Chr11:5830304 Gm53664 within coordinates of
Tssr100216 1927 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs248317770
MGI SNP Detail		 Chr11:5830325 Gm53664 within coordinates of
Tssr100216 1948 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs221359598
MGI SNP Detail		 Chr11:5830340 Gm53664 within coordinates of
Tssr100216 1963 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
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Showing SNP(s) 1 - 85 of 85
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory