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Mouse SNP Summary
Symbol
Name
ID 		Tssr100555
transcription start site region 100555
MGI:6028322

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Showing SNP(s) 1 - 38 of 38

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259992250
MGI SNP Detail		 Chr11:21097780 Peli1 within coordinates of
Tssr100555 1933 bp upstream
 SNP A/T T A
rs257742164
MGI SNP Detail		 Chr11:21097800 Peli1 within coordinates of
Tssr100555 1913 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs26831740
MGI SNP Detail		 Chr11:21097881 Peli1 within coordinates of
Tssr100555 1832 bp upstream
 SNP C/T C C C C C C T C C C C C C C T C
rs239957863
MGI SNP Detail		 Chr11:21097884 Peli1 within coordinates of
Tssr100555 1829 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs26831739
MGI SNP Detail		 Chr11:21097913 Peli1 within coordinates of
Tssr100555 1800 bp upstream
 SNP A/G A A A A A A A A A A A A A G A
rs26831738
MGI SNP Detail		 Chr11:21097936 Peli1 within coordinates of
Tssr100555 1777 bp upstream
 SNP G/T G G G G G G G G G G G G G T G
rs26831737
MGI SNP Detail		 Chr11:21098100 Peli1 within coordinates of
Tssr100555 1613 bp upstream
 SNP G/T T T T T T T T T T T T T T G T
rs26831736
MGI SNP Detail		 Chr11:21098442 Peli1 within coordinates of
Tssr100555 1271 bp upstream
 SNP C/T T T T T T T T T T T T T T C T
rs229579478
MGI SNP Detail		 Chr11:21098515 Peli1 within coordinates of
Tssr100555 1198 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs255668294
MGI SNP Detail		 Chr11:21098536 Peli1 within coordinates of
Tssr100555 1177 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs26831735
MGI SNP Detail		 Chr11:21098581 Peli1 within coordinates of
Tssr100555 1132 bp upstream
 SNP C/T C C C C C C C C C C C C C T C
rs227748149
MGI SNP Detail		 Chr11:21098764 Peli1 within coordinates of
Tssr100555 949 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs247586202
MGI SNP Detail		 Chr11:21098805 Peli1 within coordinates of
Tssr100555 908 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs216999162
MGI SNP Detail		 Chr11:21098959 Peli1 within coordinates of
Tssr100555 754 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs583243462
MGI SNP Detail		 Chr11:21099414 Peli1 within coordinates of
Tssr100555 299 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs587238259
MGI SNP Detail		 Chr11:21099419 Peli1 within coordinates of
Tssr100555 294 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs236500010
MGI SNP Detail		 Chr11:21099423 Peli1 within coordinates of
Tssr100555 290 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs249176901
MGI SNP Detail		 Chr11:21099574 Peli1 within coordinates of
Tssr100555 139 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs213528585
MGI SNP Detail		 Chr11:21099594 Peli1 within coordinates of
Tssr100555 119 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs236329237
MGI SNP Detail		 Chr11:21099767 Peli1 within coordinates of
Tssr100555 43 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs262386040
MGI SNP Detail		 Chr11:21099987 Peli1 within coordinates of
Tssr100555 263 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs26831734
MGI SNP Detail		 Chr11:21100169 Peli1 within coordinates of
Tssr100555 445 bp downstream
 SNP C/T C C C C C C C C C C C C C T C
rs26831733
MGI SNP Detail		 Chr11:21100191 Peli1 within coordinates of
Tssr100555 467 bp downstream
 SNP C/T T T T T T T T T T T T T T C T
rs252629308
MGI SNP Detail		 Chr11:21100356 Tssr100555 632 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240031568
MGI SNP Detail		 Chr11:21100383 Tssr100555 659 bp downstream
 SNP C/G C G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235631146
MGI SNP Detail		 Chr11:21100402 Tssr100555 678 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs26831732
MGI SNP Detail		 Chr11:21100595 Tssr100555 871 bp downstream
 SNP A/G G G G G G G G G G G G G G A G
rs221839343
MGI SNP Detail		 Chr11:21100829 Tssr100555 1105 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs243817715
MGI SNP Detail		 Chr11:21100874 Tssr100555 1150 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs265368452
MGI SNP Detail		 Chr11:21100959 Tssr100555 1235 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A
rs26831731
MGI SNP Detail		 Chr11:21101040 Tssr100555 1316 bp downstream
 SNP A/C A A A A A A A A A A A A A C A
rs260969002
MGI SNP Detail		 Chr11:21101189 Tssr100555 1465 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T
rs229561195
MGI SNP Detail		 Chr11:21101203 Tssr100555 1479 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A
rs252748713
MGI SNP Detail		 Chr11:21101307 Tssr100555 1583 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs581390298
MGI SNP Detail		 Chr11:21101331 Tssr100555 1607 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C
rs26831730
MGI SNP Detail		 Chr11:21101494 Tssr100555 1770 bp downstream
 SNP A/G A A A A A A A A A A A A A G A
rs26831729
MGI SNP Detail		 Chr11:21101542 Tssr100555 1818 bp downstream
 SNP C/T T T T T T T C T T T T T T C C
rs251657107
MGI SNP Detail		 Chr11:21101554 Tssr100555 1830 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C
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Showing SNP(s) 1 - 38 of 38
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory