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Mouse SNP Summary
Symbol
Name
ID 		Tssr100691
transcription start site region 100691
MGI:6028458

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Showing SNP(s) 1 - 66 of 66

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs224488321
MGI SNP Detail		 Chr11:29120944 A630052C17Rik within coordinates of
Tssr100691 1969 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247263094
MGI SNP Detail		 Chr11:29120989 A630052C17Rik within coordinates of
Tssr100691 1924 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257430525
MGI SNP Detail		 Chr11:29121027 A630052C17Rik within coordinates of
Tssr100691 1886 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221590270
MGI SNP Detail		 Chr11:29121092 A630052C17Rik within coordinates of
Tssr100691 1821 bp upstream
 SNP A/G G G G G A G A A G A G G G G G G G G G G G A G G G A G G G G G A G G A G G G G G G G G A G G G G G G G A A
rs48467502
MGI SNP Detail		 Chr11:29121113 A630052C17Rik within coordinates of
Tssr100691 1800 bp upstream
 SNP C/T C T T
rs261358535
MGI SNP Detail		 Chr11:29121189 A630052C17Rik within coordinates of
Tssr100691 1724 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs228621164
MGI SNP Detail		 Chr11:29121274 A630052C17Rik within coordinates of
Tssr100691 1639 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29481946
MGI SNP Detail		 Chr11:29121322 A630052C17Rik within coordinates of
Tssr100691 1591 bp upstream
 SNP A/T T A A
rs29467768
MGI SNP Detail		 Chr11:29121331 A630052C17Rik within coordinates of
Tssr100691 1582 bp upstream
 SNP C/T C T T
rs230769328
MGI SNP Detail		 Chr11:29121347 A630052C17Rik within coordinates of
Tssr100691 1566 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255132829
MGI SNP Detail		 Chr11:29121399 A630052C17Rik within coordinates of
Tssr100691 1514 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212800436
MGI SNP Detail		 Chr11:29121463 A630052C17Rik within coordinates of
Tssr100691 1450 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs26835513
MGI SNP Detail		 Chr11:29121464 A630052C17Rik within coordinates of
Tssr100691 1449 bp upstream
 SNP C/T C T
rs29387554
MGI SNP Detail		 Chr11:29121578 A630052C17Rik within coordinates of
Tssr100691 1335 bp upstream
 SNP A/C C A C
rs247097981
MGI SNP Detail		 Chr11:29121661 A630052C17Rik within coordinates of
Tssr100691 1252 bp upstream
 SNP C/T C C C C T C T T C T C C C C C C C C C C C T C C C T C C C C C T C C T C C C C C C C C T C C C C C C C T T
rs26835512
MGI SNP Detail		 Chr11:29121669 A630052C17Rik within coordinates of
Tssr100691 1244 bp upstream
 SNP C/G C G C G C G C G C G
rs29413739
MGI SNP Detail		 Chr11:29121694 A630052C17Rik within coordinates of
Tssr100691 1219 bp upstream
 SNP A/C C A C
rs214912506
MGI SNP Detail		 Chr11:29121741 A630052C17Rik within coordinates of
Tssr100691 1172 bp upstream
 SNP A/G A A A A G A G G A G A A A A A A A A A A A G A A A G A A A A A G A A G A A A A A A A A G A A A A A A A G G
rs237253141
MGI SNP Detail		 Chr11:29121778 A630052C17Rik within coordinates of
Tssr100691 1135 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs262179771
MGI SNP Detail		 Chr11:29121823 A630052C17Rik within coordinates of
Tssr100691 1090 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs222102994
MGI SNP Detail		 Chr11:29122109 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Tssr100691 804 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs230223346
MGI SNP Detail		 Chr11:29122110 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Tssr100691 803 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255300195
MGI SNP Detail		 Chr11:29122123 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Tssr100691 790 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs222773085
MGI SNP Detail		 Chr11:29122138 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Tssr100691 775 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs263256914
MGI SNP Detail		 Chr11:29122173 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Tssr100691 740 bp upstream
 SNP A/G G G G G A G A A G A G G G G G G G G G G G A G G G A G G G G G A G G A G G G G G G G G A G G G G G G A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223393563
MGI SNP Detail		 Chr11:29122198 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Tssr100691 715 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs242964638
MGI SNP Detail		 Chr11:29122228 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Tssr100691 685 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A G
rs264832025
MGI SNP Detail		 Chr11:29122231 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Tssr100691 682 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T C
rs223443738
MGI SNP Detail		 Chr11:29122259 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Tssr100691 654 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs26835511
MGI SNP Detail		 Chr11:29122302 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Tssr100691 611 bp upstream
 SNP C/T T C T T T C T C T
rs26835510
MGI SNP Detail		 Chr11:29122482 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Tssr100691 431 bp upstream
 SNP G/T T G T T G T G T
rs48804328
MGI SNP Detail		 Chr11:29122507 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Tssr100691 406 bp upstream
 SNP C C
rs26835509
MGI SNP Detail		 Chr11:29122564 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Tssr100691 349 bp upstream
 SNP C/T C T C C C T C T C
rs256879759
MGI SNP Detail		 Chr11:29122611 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Tssr100691 302 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214496654
MGI SNP Detail		 Chr11:29122622 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Tssr100691 291 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs26835508
MGI SNP Detail		 Chr11:29122683 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Rr369144 within coordinates of
Tssr100691 230 bp upstream
 SNP C/G C G C C G G C
rs26835507
MGI SNP Detail		 Chr11:29122689 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Rr369144 within coordinates of
Tssr100691 224 bp upstream
 SNP A/T A T A T T A
rs213162168
MGI SNP Detail		 Chr11:29122735 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Rr369144 within coordinates of
Tssr100691 178 bp upstream
Tssr107208 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs230195165
MGI SNP Detail		 Chr11:29122736 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Rr369144 within coordinates of
Tssr100691 177 bp upstream
Tssr107208 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255638372
MGI SNP Detail		 Chr11:29122816 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Rr369144 within coordinates of
Tssr100691 97 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs26835506
MGI SNP Detail		 Chr11:29122908 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Ppp4r3b within coordinates of
Rr369144 within coordinates of
Tssr100691 5 bp upstream
 SNP A/G A G A A A G A G A
rs234851072
MGI SNP Detail		 Chr11:29123057 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Ppp4r3b within coordinates of
Tssr100691 132 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262966733
MGI SNP Detail		 Chr11:29123076 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Ppp4r3b within coordinates of
Tssr100691 151 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs26835505
MGI SNP Detail		 Chr11:29123512 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Ppp4r3b within coordinates of
Tssr100691 587 bp downstream
 SNP A/G G G A G G A A G A G A
rs26835504
MGI SNP Detail		 Chr11:29123518 A630052C17Rik within coordinates of
Cpgi2670 within coordinates of
Ppp4r3b within coordinates of
Tssr100691 593 bp downstream
 SNP C/G C C G C G C G G C G C
rs580421272
MGI SNP Detail		 Chr11:29123701 Ppp4r3b within coordinates of
Tssr100691 776 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C
rs217869840
MGI SNP Detail		 Chr11:29123789 Ppp4r3b within coordinates of
Tssr100691 864 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs241473477
MGI SNP Detail		 Chr11:29123818 Ppp4r3b within coordinates of
Tssr100691 893 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258945492
MGI SNP Detail		 Chr11:29123837 Ppp4r3b within coordinates of
Tssr100691 912 bp downstream
 SNP C/T C C C T C T T C T C C C C C C C C C C C T C C C T C C C C T C C T C C C C C C C C T C C C C T C C T C
rs227588379
MGI SNP Detail		 Chr11:29123855 Ppp4r3b within coordinates of
Tssr100691 930 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251946354
MGI SNP Detail		 Chr11:29123888 Ppp4r3b within coordinates of
Tssr100691 963 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29414060
MGI SNP Detail		 Chr11:29123980 Ppp4r3b within coordinates of
Tssr100691 1055 bp downstream
 SNP G/T G T G T
rs29426493
MGI SNP Detail		 Chr11:29124002 Ppp4r3b within coordinates of
Tssr100691 1077 bp downstream
 SNP A/G G A G A
rs253851334
MGI SNP Detail		 Chr11:29124037 Ppp4r3b within coordinates of
Tssr100691 1112 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29407457
MGI SNP Detail		 Chr11:29124077 Ppp4r3b within coordinates of
Tssr100691 1152 bp downstream
 SNP A/G G G A G A
rs29481452
MGI SNP Detail		 Chr11:29124137 Ppp4r3b within coordinates of
Tssr100691 1212 bp downstream
 SNP A/G A G A G
rs249098039
MGI SNP Detail		 Chr11:29124219 Ppp4r3b within coordinates of
Tssr100691 1294 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217008642
MGI SNP Detail		 Chr11:29124256 Ppp4r3b within coordinates of
Tssr100691 1331 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs583909570
MGI SNP Detail		 Chr11:29124277 Ppp4r3b within coordinates of
Tssr100691 1352 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29410796
MGI SNP Detail		 Chr11:29124336 Ppp4r3b within coordinates of
Tssr100691 1411 bp downstream
 SNP C/G G C G C
rs29385328
MGI SNP Detail		 Chr11:29124409 Ppp4r3b within coordinates of
Tssr100691 1484 bp downstream
 SNP A/T T A T A
rs215266010
MGI SNP Detail		 Chr11:29124539 Ppp4r3b within coordinates of
Tssr100691 1614 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs26835503
MGI SNP Detail		 Chr11:29124598 Ppp4r3b within coordinates of
Tssr100691 1673 bp downstream
 SNP A/G G A A G A G G
rs586107006
MGI SNP Detail		 Chr11:29124790 Ppp4r3b within coordinates of
Tssr100691 1865 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs261653226
MGI SNP Detail		 Chr11:29124833 Ppp4r3b within coordinates of
Tssr100691 1908 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218134737
MGI SNP Detail		 Chr11:29124853 Ppp4r3b within coordinates of
Tssr100691 1928 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 66 of 66
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory