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Mouse SNP Summary
Symbol
Name
ID 		Tssr100854
transcription start site region 100854
MGI:6028621

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Showing SNP(s) 1 - 39 of 39

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238031265
MGI SNP Detail		 Chr11:32403307 Gm73788 within coordinates of
Tssr100854 1741 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253617584
MGI SNP Detail		 Chr11:32403332 Gm73788 within coordinates of
Tssr100854 1716 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218603738
MGI SNP Detail		 Chr11:32403473 Gm73788 within coordinates of
Tssr100854 1575 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs240852064
MGI SNP Detail		 Chr11:32403797 Gm73788 within coordinates of
Tssr100854 1251 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581243478
MGI SNP Detail		 Chr11:32403867 Gm73788 within coordinates of
Tssr100854 1181 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264364824
MGI SNP Detail		 Chr11:32403902 Gm73788 within coordinates of
Tssr100854 1146 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T
rs232028068
MGI SNP Detail		 Chr11:32403908 Gm73788 within coordinates of
Tssr100854 1140 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs253051647
MGI SNP Detail		 Chr11:32404045 Gm73788 within coordinates of
Tssr100854 1003 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265106527
MGI SNP Detail		 Chr11:32404211 Gm73788 within coordinates of
Tssr100854 837 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A A A T T T A T T T T T A T A T
rs584815356
MGI SNP Detail		 Chr11:32404288 Gm73788 within coordinates of
Tssr100854 760 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs226749915
MGI SNP Detail		 Chr11:32404575 Cpgi2704 within coordinates of
Gm73788 within coordinates of
Tssr100854 473 bp upstream
 SNP A/G G G G A G G G G A G G G G G G G G G A G A A G G G A A G G G G A A G G G G A A A G A A A A G G A G G G G
rs243564925
MGI SNP Detail		 Chr11:32404588 Cpgi2704 within coordinates of
Gm73788 within coordinates of
Tssr100854 460 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs212983769
MGI SNP Detail		 Chr11:32404653 Cpgi2704 within coordinates of
Gm73788 within coordinates of
Tssr100854 395 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235921347
MGI SNP Detail		 Chr11:32404711 Cpgi2704 within coordinates of
Gm73788 within coordinates of
Tssr100854 337 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260581620
MGI SNP Detail		 Chr11:32404786 Cpgi2704 within coordinates of
Gm73788 within coordinates of
Tssr100854 262 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216045543
MGI SNP Detail		 Chr11:32404851 Cpgi2704 within coordinates of
Gm73788 within coordinates of
Tssr100854 197 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T T T C C C T C C C C C C C C T C C
rs241380946
MGI SNP Detail		 Chr11:32404985 Cpgi2704 within coordinates of
Gm73788 within coordinates of
Tssr100854 63 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs257352956
MGI SNP Detail		 Chr11:32405040 Cpgi2704 within coordinates of
Tssr100854 8 bp upstream
 SNP A/C C C C A C C C C A C C C C C C C C C C A C C C C A A C C C A C C C C C A A C C A A A A C C C C C C C
rs213418103
MGI SNP Detail		 Chr11:32405041 Cpgi2704 within coordinates of
Tssr100854 7 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs231944964
MGI SNP Detail		 Chr11:32405080 Cpgi2704 within coordinates of
Tssr100854 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247861452
MGI SNP Detail		 Chr11:32405087 Cpgi2704 within coordinates of
Tssr100854 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579334658
MGI SNP Detail		 Chr11:32405135 Cpgi2704 within coordinates of
Tssr100854 36 bp downstream
Tssr100855 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs218402970
MGI SNP Detail		 Chr11:32405161 Cpgi2704 within coordinates of
Tssr100854 62 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A A G G G A G G G G G G G A G G
rs240806564
MGI SNP Detail		 Chr11:32405193 Cpgi2704 within coordinates of
Tssr100854 94 bp downstream
 SNP C/T T T C T T T T T T T T T C T C C T T C T T C C C C C C C C C C C T T C T C T T
rs264182593
MGI SNP Detail		 Chr11:32405282 Cpgi2704 within coordinates of
Tssr100854 183 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs224190287
MGI SNP Detail		 Chr11:32405297 Cpgi2704 within coordinates of
Tssr100854 198 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs248759789
MGI SNP Detail		 Chr11:32405416 Cpgi2704 within coordinates of
Tssr100854 317 bp downstream
Tssr100856 within coordinates of
Ubtd2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G G G A A A G A A A A A A A A G A
rs262317306
MGI SNP Detail		 Chr11:32405712 Cpgi2704 within coordinates of
Tssr100854 613 bp downstream
Ubtd2 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs226714341
MGI SNP Detail		 Chr11:32405715 Cpgi2704 within coordinates of
Tssr100854 616 bp downstream
Ubtd2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A A A G G G A G G G G G G G G A G G
rs237428279
MGI SNP Detail		 Chr11:32405769 Cpgi2704 within coordinates of
Tssr100854 670 bp downstream
Ubtd2 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G
rs256849515
MGI SNP Detail		 Chr11:32405907 Cpgi2704 within coordinates of
Tssr100854 808 bp downstream
Ubtd2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228609557
MGI SNP Detail		 Chr11:32406171 Tssr100854 1072 bp downstream
Ubtd2 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs254785596
MGI SNP Detail		 Chr11:32406187 Tssr100854 1088 bp downstream
Ubtd2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216579805
MGI SNP Detail		 Chr11:32406412 Tssr100854 1313 bp downstream
Ubtd2 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232741970
MGI SNP Detail		 Chr11:32406467 Tssr100854 1368 bp downstream
Ubtd2 within coordinates of
 SNP A/T T T T T A T T T T A T T T T T T T T T A T A A T T T A A T T T T A A T T T T A A A T A A A A T T T T T T T
rs255565052
MGI SNP Detail		 Chr11:32406503 Tssr100854 1404 bp downstream
Ubtd2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214708315
MGI SNP Detail		 Chr11:32406717 Tssr100854 1618 bp downstream
Ubtd2 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs231909336
MGI SNP Detail		 Chr11:32406844 Tssr100854 1745 bp downstream
Ubtd2 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs248008426
MGI SNP Detail		 Chr11:32406958 Tssr100854 1859 bp downstream
Ubtd2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 39 of 39
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory