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Mouse SNP Summary
Symbol
Name
ID 		Tssr101998
transcription start site region 101998
MGI:6029765

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs242145482
MGI SNP Detail		 Chr11:62020011 Specc1 within coordinates of
Tssr101998 1899 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264505858
MGI SNP Detail		 Chr11:62020054 Specc1 within coordinates of
Tssr101998 1856 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228958148
MGI SNP Detail		 Chr11:62020066 Specc1 within coordinates of
Tssr101998 1844 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs29445002
MGI SNP Detail		 Chr11:62020092 Specc1 within coordinates of
Tssr101998 1818 bp upstream
 SNP A/G G G G A
rs257866223
MGI SNP Detail		 Chr11:62020111 Specc1 within coordinates of
Tssr101998 1799 bp upstream
 SNP A/C A A A A A A A A A C A A A A A A A A A C A A C A A A A C C A A A A A A A A A A A C A A A A A A A C A A A A
rs226584484
MGI SNP Detail		 Chr11:62020112 Specc1 within coordinates of
Tssr101998 1798 bp upstream
 SNP A/C C C C C C C C C C A C C C C C C C C C A C C A C C C C A A C C C C C C C C C C A C C C C C C C A C C C C
rs245561618
MGI SNP Detail		 Chr11:62020203 Specc1 within coordinates of
Tssr101998 1707 bp upstream
 SNP C/G C C C C C C C C C G C C C C C C C C C G C C G C C C C G G C C C C G C C C C C C G C C C C C C C G C C C C
rs215062648
MGI SNP Detail		 Chr11:62020241 Specc1 within coordinates of
Tssr101998 1669 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs238605963
MGI SNP Detail		 Chr11:62020254 Specc1 within coordinates of
Tssr101998 1656 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs250288722
MGI SNP Detail		 Chr11:62020266 Specc1 within coordinates of
Tssr101998 1644 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A G A A A A A A G A A A A A A A G A A A A
rs29390419
MGI SNP Detail		 Chr11:62020279 Specc1 within coordinates of
Tssr101998 1631 bp upstream
 SNP G/T G G G T
rs236466655
MGI SNP Detail		 Chr11:62020318 Specc1 within coordinates of
Tssr101998 1592 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs586361007
MGI SNP Detail		 Chr11:62020336 Specc1 within coordinates of
Tssr101998 1574 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs580434666
MGI SNP Detail		 Chr11:62020343 Specc1 within coordinates of
Tssr101998 1567 bp upstream
 SNP A/T A A A A A A A A A T A A A A A A A A A T A A A A A A A T T A A A A A A A A A A A A A A A A A A A A A A A A
rs254437271
MGI SNP Detail		 Chr11:62020400 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 1510 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs222088744
MGI SNP Detail		 Chr11:62020426 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 1484 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234135446
MGI SNP Detail		 Chr11:62020481 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 1429 bp upstream
 SNP C/T T T T T T T T T T C T T T T T T T T T C T T C T T T T C C T T T T C T T T T T T C T T T T T T T C T T T T
rs262404421
MGI SNP Detail		 Chr11:62020485 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 1425 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs583841498
MGI SNP Detail		 Chr11:62020606 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 1304 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs26982856
MGI SNP Detail		 Chr11:62020620 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 1290 bp upstream
 SNP C/T C T T T T T T C T T C T T T C C
rs581334267
MGI SNP Detail		 Chr11:62020631 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 1279 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs26982855
MGI SNP Detail		 Chr11:62020668 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 1242 bp upstream
 SNP A/T T T T T T T A T T A T T T T
rs26982854
MGI SNP Detail		 Chr11:62020679 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 1231 bp upstream
 SNP A/G A A A A A A A A A A G A A A A
rs261497635
MGI SNP Detail		 Chr11:62020845 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 1065 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs29388474
MGI SNP Detail		 Chr11:62020917 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 993 bp upstream
 SNP A/G G G G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29443327
MGI SNP Detail		 Chr11:62020935 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 975 bp upstream
 SNP A/G A A A G
rs26982853
MGI SNP Detail		 Chr11:62020938 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 972 bp upstream
 SNP A/G A A G A G A G G A A A A A A A
rs257746638
MGI SNP Detail		 Chr11:62020940 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 970 bp upstream
 SNP A/C A A A A A A A A A C A A A A A A A A A C A A A A A A A C C A A A A A A A A A A A A A A A A A A A A A A A A
rs29409841
MGI SNP Detail		 Chr11:62020954 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 956 bp upstream
 SNP G/T T T T G
rs243829867
MGI SNP Detail		 Chr11:62021046 Gm39985 within coordinates of
Rr448793 within coordinates of
Specc1 within coordinates of
Tssr101998 864 bp upstream
 SNP C/T C C C C C C C C C T C C C C C C C C C T C C C C C C C T T C C C C C C C C C C C C C C C C C C C C C C C C
rs265004275
MGI SNP Detail		 Chr11:62021061 Gm39985 within coordinates of
Rr448793 within coordinates of
Specc1 within coordinates of
Tssr101998 849 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs26982852
MGI SNP Detail		 Chr11:62021075 Gm39985 within coordinates of
Rr448793 within coordinates of
Specc1 within coordinates of
Tssr101998 835 bp upstream
 SNP C/T T T T T T T T T C C T C C T T C T
rs254480097
MGI SNP Detail		 Chr11:62021169 Gm39985 within coordinates of
Rr448793 within coordinates of
Specc1 within coordinates of
Tssr101998 741 bp upstream
 SNP A/G G G G G G G G G G A G G G G G G G G G A G G G G G G G A A G G G G G G G G G G G G G G G G G G G G G G G G
rs212444494
MGI SNP Detail		 Chr11:62021183 Gm39985 within coordinates of
Rr448793 within coordinates of
Specc1 within coordinates of
Tssr101998 727 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs583251563
MGI SNP Detail		 Chr11:62021285 Gm39985 within coordinates of
Rr448793 within coordinates of
Specc1 within coordinates of
Tssr101998 625 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229555795
MGI SNP Detail		 Chr11:62021367 Gm39985 within coordinates of
Rr448793 within coordinates of
Specc1 within coordinates of
Tssr101998 543 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248124794
MGI SNP Detail		 Chr11:62021370 Gm39985 within coordinates of
Rr448793 within coordinates of
Specc1 within coordinates of
Tssr101998 540 bp upstream
 SNP A/G A A A A A A A A A G A A A A A A A A A G A A A A A A A G G A A A A A A A A A A A A A A A A A A A A A A A A
rs26982851
MGI SNP Detail		 Chr11:62021373 Gm39985 within coordinates of
Rr448793 within coordinates of
Specc1 within coordinates of
Tssr101998 537 bp upstream
 SNP C/T T T T T T T C T T T T C
rs26982850
MGI SNP Detail		 Chr11:62021408 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 502 bp upstream
 SNP C/T T T T C T T
rs258056337
MGI SNP Detail		 Chr11:62021595 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 315 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs29454376
MGI SNP Detail		 Chr11:62021654 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 256 bp upstream
 SNP A/G G G G A
rs26982849
MGI SNP Detail		 Chr11:62021672 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 238 bp upstream
 SNP C/T T T T T T T C T T C T T T
rs260748873
MGI SNP Detail		 Chr11:62021696 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 214 bp upstream
 SNP G/T T T T T T T T T T G T T T T T T T T T G T T G T T T T G G T T T T G T T T T T T G T T T T T T T G T T T T
rs222715121
MGI SNP Detail		 Chr11:62021762 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 148 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs586938454
MGI SNP Detail		 Chr11:62021795 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 115 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs580733082
MGI SNP Detail		 Chr11:62021807 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 103 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs584378310
MGI SNP Detail		 Chr11:62021857 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 53 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T
rs578497696
MGI SNP Detail		 Chr11:62021861 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 49 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs240804431
MGI SNP Detail		 Chr11:62021917 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 3 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A
rs251690330
MGI SNP Detail		 Chr11:62022033 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 119 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs26982848
MGI SNP Detail		 Chr11:62022056 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 142 bp downstream
 SNP A/G G G G G G G A G G A G G G
rs246469238
MGI SNP Detail		 Chr11:62022082 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 168 bp downstream
 SNP A/G A A A A A A A A A G A A A A A A A A A G A A A A A A A G G A A A A G A A A A A A A A A A A A A A G A A A A
rs262260368
MGI SNP Detail		 Chr11:62022091 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 177 bp downstream
 SNP A/G G G G G A G G G G G G G G G G G A A G G G G G G G G G G G G G G G G G G G G G A G G G A G G G G G G G G G
rs228907379
MGI SNP Detail		 Chr11:62022100 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 186 bp downstream
 SNP C/T T T T T T T T T T C T T T T T T T T T C T T T T T T T C C T T T T C T T T T T T T T T T T T T T T T T T T
rs242551784
MGI SNP Detail		 Chr11:62022195 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 281 bp downstream
 SNP A/C A A A A A A A A A C A A A A A A A A A C A A C A A A A C C A A A A C A A A A A A C A A A A A A A C A A A A
rs26982847
MGI SNP Detail		 Chr11:62022206 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 292 bp downstream
 SNP C/T T T T T T T C T T C T T C
rs229589339
MGI SNP Detail		 Chr11:62022213 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 299 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248358665
MGI SNP Detail		 Chr11:62022277 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 363 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216263007
MGI SNP Detail		 Chr11:62022285 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 371 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs585001633
MGI SNP Detail		 Chr11:62022336 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 422 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs231739928
MGI SNP Detail		 Chr11:62022393 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 479 bp downstream
 SNP A/T A A A A A A A A A T A A A A A A A A A T A A T A A A A T A A A A T A A A A A A T A A A A A A A A A A A A
rs256320364
MGI SNP Detail		 Chr11:62022394 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 480 bp downstream
 SNP A/G G G G G G G G G G A G G G G G G G G G A G G A G G G G A A G G G G A G G G G G G A G G G G G G G G G G G G
rs29427975
MGI SNP Detail		 Chr11:62022473 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 559 bp downstream
 SNP A/G A G G A A A
rs237404330
MGI SNP Detail		 Chr11:62022490 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 576 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T G T T T T T T T T T T T T
rs26982846
MGI SNP Detail		 Chr11:62022540 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 626 bp downstream
 SNP A/C A A A A A A C A A C A A C
rs217222600
MGI SNP Detail		 Chr11:62022648 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 734 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs26982845
MGI SNP Detail		 Chr11:62022702 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 788 bp downstream
 SNP A/G G G G G G G A G G A G G G
rs251933316
MGI SNP Detail		 Chr11:62022723 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 809 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220697266
MGI SNP Detail		 Chr11:62022739 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 825 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs236666690
MGI SNP Detail		 Chr11:62022747 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 833 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A G A A A A A A G A A A A A A A A A A A A
rs261826659
MGI SNP Detail		 Chr11:62022765 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 851 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A G A A A A A A G A A A A A A A A A A A A
rs221247703
MGI SNP Detail		 Chr11:62022775 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 861 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A G A A A A A A G A A A A A A A A A A A A
rs26982844
MGI SNP Detail		 Chr11:62022776 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 862 bp downstream
 SNP C/T C C C C C C T C C T C C
rs256309619
MGI SNP Detail		 Chr11:62022782 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 868 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs578898267
MGI SNP Detail		 Chr11:62022839 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 925 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A G A A A A A A G A A A A A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs26982843
MGI SNP Detail		 Chr11:62022921 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 1007 bp downstream
 SNP G/T T T T T T T G T T G T T G
rs26982842
MGI SNP Detail		 Chr11:62022988 Gm39985 within coordinates of
Specc1 within coordinates of
Tssr101998 1074 bp downstream
 SNP C/T T T T T T T C T T C T T T
rs26982841
MGI SNP Detail		 Chr11:62023318 Specc1 within coordinates of
Tssr101998 1404 bp downstream
 SNP C/T T T T T T T T T T T T T C
rs232522207
MGI SNP Detail		 Chr11:62023347 Specc1 within coordinates of
Tssr101998 1433 bp downstream
 SNP A/T T T T T T T T T T A T T T T T T T T T A T T T T T T T A A T T T T T T T T T T T A T T T T T T T A T T T T
rs251636893
MGI SNP Detail		 Chr11:62023356 Specc1 within coordinates of
Tssr101998 1442 bp downstream
 SNP A/T A A A A A A A A A T A A A A A A A A A T A A A A A A A T T A A A A A A A A A A A A A A A A A A A A A A A A
rs29434898
MGI SNP Detail		 Chr11:62023377 Specc1 within coordinates of
Tssr101998 1463 bp downstream
 SNP A/C A A A A C
rs229060305
MGI SNP Detail		 Chr11:62023491 Specc1 within coordinates of
Tssr101998 1577 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs242460381
MGI SNP Detail		 Chr11:62023603 Specc1 within coordinates of
Tssr101998 1689 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs582358790
MGI SNP Detail		 Chr11:62023604 Specc1 within coordinates of
Tssr101998 1690 bp downstream
 SNP A/G G G G G G G G G G A G G G G G G G G G A G G G G G G G A A G G G G G G G G G G G G G G G G G G G G G G G G
rs217417149
MGI SNP Detail		 Chr11:62023624 Specc1 within coordinates of
Tssr101998 1710 bp downstream
 SNP G/T G G G G G G G G G T G G G G G G G G G T G G G G G G G T T G G G G G G G G G G G G G G G G G G G G G G G G
rs234184315
MGI SNP Detail		 Chr11:62023661 Specc1 within coordinates of
Tssr101998 1747 bp downstream
 SNP C/T T T T T T T T T T C T T T T T T T T T C T T T T T T T C C T T T T T T T T T T T C T T T T T T T C T T T T
rs245825626
MGI SNP Detail		 Chr11:62023662 Specc1 within coordinates of
Tssr101998 1748 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs215760424
MGI SNP Detail		 Chr11:62023691 Specc1 within coordinates of
Tssr101998 1777 bp downstream
 SNP C/T C C C C C C C C C T C C C C C C C C C T C C C C C C C T T C C C C C C C C C C C C C C C C C C C C C C C
rs238970620
MGI SNP Detail		 Chr11:62023707 Specc1 within coordinates of
Tssr101998 1793 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs256799970
MGI SNP Detail		 Chr11:62023779 Specc1 within coordinates of
Tssr101998 1865 bp downstream
 SNP C/G G G G G G G G G G C G G G G G G G G G C G G G G G G G C C G G G G G G G G G G G G G G G G G G G C G G G G
rs220643349
MGI SNP Detail		 Chr11:62023788 Specc1 within coordinates of
Tssr101998 1874 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs234301624
MGI SNP Detail		 Chr11:62023830 Specc1 within coordinates of
Tssr101998 1916 bp downstream
 SNP C/T C C C C C C C C C T C C C C C C C C C T C C C C C C C T T C C C C C C C C C C C C C C C C C C C C C C C C
rs26982840
MGI SNP Detail		 Chr11:62023854 Specc1 within coordinates of
Tssr101998 1940 bp downstream
 SNP C/T C C C C C C T C C T C C C
rs26982839
MGI SNP Detail		 Chr11:62023889 Specc1 within coordinates of
Tssr101998 1975 bp downstream
 SNP C/T T T T T T T C T T C T T T
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Showing SNP(s) 1 - 94 of 94
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory