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Mouse SNP Summary
Symbol
Name
ID 		Tssr102360
transcription start site region 102360
MGI:6030127

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Showing SNP(s) 1 - 56 of 56

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234851004
MGI SNP Detail		 Chr11:68915969 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102360 1945 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257153900
MGI SNP Detail		 Chr11:68915981 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102360 1933 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs29393486
MGI SNP Detail		 Chr11:68916038 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102360 1876 bp upstream
 SNP C/T C T C T
rs234866493
MGI SNP Detail		 Chr11:68916115 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102360 1799 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs221862387
MGI SNP Detail		 Chr11:68916312 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102360 1602 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A
rs29466835
MGI SNP Detail		 Chr11:68916385 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102360 1529 bp upstream
 SNP A/G A A A G A G
rs257186900
MGI SNP Detail		 Chr11:68916407 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102360 1507 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221451220
MGI SNP Detail		 Chr11:68916552 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102360 1362 bp upstream
 SNP A/G A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A G A A A A A A A A A
rs29457283
MGI SNP Detail		 Chr11:68916557 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102360 1357 bp upstream
 SNP A/G G G G A G A
rs262619918
MGI SNP Detail		 Chr11:68916766 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 1148 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A G G G A A A A A A A G A A G A A A A A A A G A A A A A A A A A A A G A A A
rs29390257
MGI SNP Detail		 Chr11:68916835 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 1079 bp upstream
 SNP C/T T T T C T C
rs249688775
MGI SNP Detail		 Chr11:68916836 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 1078 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs260472406
MGI SNP Detail		 Chr11:68916843 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 1071 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs29471519
MGI SNP Detail		 Chr11:68916850 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 1064 bp upstream
 SNP G/T T T T G T G
rs29455823
MGI SNP Detail		 Chr11:68916941 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 973 bp upstream
 SNP C/T C C C C T C T
rs29401710
MGI SNP Detail		 Chr11:68916953 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 961 bp upstream
 SNP A/G A A A A G A G
rs29477764
MGI SNP Detail		 Chr11:68917148 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 766 bp upstream
 SNP C/T T T T T C T C
rs255292756
MGI SNP Detail		 Chr11:68917256 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 658 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G
rs214866484
MGI SNP Detail		 Chr11:68917291 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 623 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs236383567
MGI SNP Detail		 Chr11:68917348 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 566 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs585026625
MGI SNP Detail		 Chr11:68917626 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 288 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs579216935
MGI SNP Detail		 Chr11:68917628 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 286 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs256441858
MGI SNP Detail		 Chr11:68917637 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 277 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C
rs29464736
MGI SNP Detail		 Chr11:68917747 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 167 bp upstream
 SNP C/T C C C T C T
rs235071124
MGI SNP Detail		 Chr11:68917752 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 162 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C T T T C C C C C C C T C C T C C C C C C C T C C C C C C C C C C C T C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29447752
MGI SNP Detail		 Chr11:68917856 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 58 bp upstream
 SNP C/T T T T C T C
rs29428701
MGI SNP Detail		 Chr11:68917896 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 18 bp upstream
 SNP G/T T T T G
rs50944511
MGI SNP Detail		 Chr11:68917898 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 16 bp upstream
 SNP C/T T T C
rs29411640
MGI SNP Detail		 Chr11:68917902 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 12 bp upstream
 SNP C/T T T T C
rs108298807
MGI SNP Detail		 Chr11:68917905 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 9 bp upstream
 SNP G/T T G
rs29389702
MGI SNP Detail		 Chr11:68917920 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 within coordinates of
 SNP G/T T T G
rs29413820
MGI SNP Detail		 Chr11:68918034 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 85 bp downstream
 SNP A/G A A A G A G
rs265190601
MGI SNP Detail		 Chr11:68918051 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 102 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29449054
MGI SNP Detail		 Chr11:68918224 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 275 bp downstream
 SNP C/T T T T C T C
rs29409001
MGI SNP Detail		 Chr11:68918257 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 308 bp downstream
 SNP C/T T T T C T C
rs260444117
MGI SNP Detail		 Chr11:68918376 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 427 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229029615
MGI SNP Detail		 Chr11:68918394 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 445 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C T T T C C C C C C C T C C T C C C C C C C T C C C C C C C C C C C T C C C
rs29394078
MGI SNP Detail		 Chr11:68918400 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 451 bp downstream
 SNP A/G A A A G A G
rs259405086
MGI SNP Detail		 Chr11:68918611 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 662 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233526020
MGI SNP Detail		 Chr11:68918806 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 857 bp downstream
Tssr102363 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C
rs247277851
MGI SNP Detail		 Chr11:68918887 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 938 bp downstream
 SNP C/T C T
rs254268605
MGI SNP Detail		 Chr11:68918896 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 947 bp downstream
 SNP A/G A G
rs227724801
MGI SNP Detail		 Chr11:68918912 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 963 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs243187801
MGI SNP Detail		 Chr11:68919019 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102360 1070 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G C C C G G G G G G G C G G C G G G G G G G C G G G G G G G G G G G C G G G
rs29389508
MGI SNP Detail		 Chr11:68919080 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102360 1131 bp downstream
 SNP A/G G G G G A G A
rs29404509
MGI SNP Detail		 Chr11:68919187 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102360 1238 bp downstream
 SNP C/G C C C C G C G
rs251085432
MGI SNP Detail		 Chr11:68919259 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102360 1310 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs215830290
MGI SNP Detail		 Chr11:68919321 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102360 1372 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs29407222
MGI SNP Detail		 Chr11:68919377 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102360 1428 bp downstream
 SNP A/G G G G A G A
rs29464197
MGI SNP Detail		 Chr11:68919666 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr235731 within coordinates of
Rr253641 within coordinates of
Tssr102360 1717 bp downstream
 SNP A/G G G G A G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs220140382
MGI SNP Detail		 Chr11:68919679 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr235731 within coordinates of
Rr253641 within coordinates of
Tssr102360 1730 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29471698
MGI SNP Detail		 Chr11:68919696 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr235731 within coordinates of
Rr253641 within coordinates of
Tssr102360 1747 bp downstream
 SNP C/T T T T C T C
rs29422171
MGI SNP Detail		 Chr11:68919735 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr235731 within coordinates of
Rr253641 within coordinates of
Tssr102360 1786 bp downstream
 SNP A/G A A A G A G
rs223231944
MGI SNP Detail		 Chr11:68919781 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr235731 within coordinates of
Rr253641 within coordinates of
Tssr102360 1832 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29468021
MGI SNP Detail		 Chr11:68919800 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr235731 within coordinates of
Rr253641 within coordinates of
Tssr102360 1851 bp downstream
 SNP A/G A A A G A G
rs259713799
MGI SNP Detail		 Chr11:68919895 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr235731 within coordinates of
Rr253641 within coordinates of
Tssr102360 1946 bp downstream
 SNP C/T C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C T C C C C C C C C C
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Showing SNP(s) 1 - 56 of 56
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory