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Mouse SNP Summary
Symbol
Name
ID 		Tssr102362
transcription start site region 102362
MGI:6030129

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Showing SNP(s) 1 - 60 of 60

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221862387
MGI SNP Detail		 Chr11:68916312 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102362 1854 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A
rs29466835
MGI SNP Detail		 Chr11:68916385 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102362 1781 bp upstream
 SNP A/G A A A G A G
rs257186900
MGI SNP Detail		 Chr11:68916407 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102362 1759 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221451220
MGI SNP Detail		 Chr11:68916552 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102362 1614 bp upstream
 SNP A/G A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A G A A A A A A A A A
rs29457283
MGI SNP Detail		 Chr11:68916557 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102362 1609 bp upstream
 SNP A/G G G G A G A
rs262619918
MGI SNP Detail		 Chr11:68916766 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 1400 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A G G G A A A A A A A G A A G A A A A A A A G A A A A A A A A A A A G A A A
rs29390257
MGI SNP Detail		 Chr11:68916835 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 1331 bp upstream
 SNP C/T T T T C T C
rs249688775
MGI SNP Detail		 Chr11:68916836 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 1330 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs260472406
MGI SNP Detail		 Chr11:68916843 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 1323 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs29471519
MGI SNP Detail		 Chr11:68916850 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 1316 bp upstream
 SNP G/T T T T G T G
rs29455823
MGI SNP Detail		 Chr11:68916941 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 1225 bp upstream
 SNP C/T C C C C T C T
rs29401710
MGI SNP Detail		 Chr11:68916953 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 1213 bp upstream
 SNP A/G A A A A G A G
rs29477764
MGI SNP Detail		 Chr11:68917148 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 1018 bp upstream
 SNP C/T T T T T C T C
rs255292756
MGI SNP Detail		 Chr11:68917256 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 910 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G
rs214866484
MGI SNP Detail		 Chr11:68917291 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 875 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs236383567
MGI SNP Detail		 Chr11:68917348 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 818 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs585026625
MGI SNP Detail		 Chr11:68917626 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 540 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs579216935
MGI SNP Detail		 Chr11:68917628 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 538 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs256441858
MGI SNP Detail		 Chr11:68917637 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 529 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C
rs29464736
MGI SNP Detail		 Chr11:68917747 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 419 bp upstream
 SNP C/T C C C T C T
rs235071124
MGI SNP Detail		 Chr11:68917752 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 414 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C T T T C C C C C C C T C C T C C C C C C C T C C C C C C C C C C C T C C C
rs29447752
MGI SNP Detail		 Chr11:68917856 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 310 bp upstream
 SNP C/T T T T C T C
rs29428701
MGI SNP Detail		 Chr11:68917896 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 270 bp upstream
 SNP G/T T T T G
rs50944511
MGI SNP Detail		 Chr11:68917898 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 268 bp upstream
 SNP C/T T T C
rs29411640
MGI SNP Detail		 Chr11:68917902 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 264 bp upstream
 SNP C/T T T T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs108298807
MGI SNP Detail		 Chr11:68917905 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 261 bp upstream
 SNP G/T T G
rs29389702
MGI SNP Detail		 Chr11:68917920 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102360 within coordinates of
Tssr102362 246 bp upstream
 SNP G/T T T G
rs29413820
MGI SNP Detail		 Chr11:68918034 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 132 bp upstream
 SNP A/G A A A G A G
rs265190601
MGI SNP Detail		 Chr11:68918051 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 115 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29449054
MGI SNP Detail		 Chr11:68918224 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 39 bp downstream
 SNP C/T T T T C T C
rs29409001
MGI SNP Detail		 Chr11:68918257 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 72 bp downstream
 SNP C/T T T T C T C
rs260444117
MGI SNP Detail		 Chr11:68918376 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 191 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229029615
MGI SNP Detail		 Chr11:68918394 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 209 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C T T T C C C C C C C T C C T C C C C C C C T C C C C C C C C C C C T C C C
rs29394078
MGI SNP Detail		 Chr11:68918400 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 215 bp downstream
 SNP A/G A A A G A G
rs259405086
MGI SNP Detail		 Chr11:68918611 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 426 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233526020
MGI SNP Detail		 Chr11:68918806 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 621 bp downstream
Tssr102363 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C
rs247277851
MGI SNP Detail		 Chr11:68918887 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 702 bp downstream
 SNP C/T C T
rs254268605
MGI SNP Detail		 Chr11:68918896 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 711 bp downstream
 SNP A/G A G
rs227724801
MGI SNP Detail		 Chr11:68918912 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Rr386226 within coordinates of
Tssr102362 727 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs243187801
MGI SNP Detail		 Chr11:68919019 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102362 834 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G C C C G G G G G G G C G G C G G G G G G G C G G G G G G G G G G G C G G G
rs29389508
MGI SNP Detail		 Chr11:68919080 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102362 895 bp downstream
 SNP A/G G G G G A G A
rs29404509
MGI SNP Detail		 Chr11:68919187 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102362 1002 bp downstream
 SNP C/G C C C C G C G
rs251085432
MGI SNP Detail		 Chr11:68919259 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102362 1074 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs215830290
MGI SNP Detail		 Chr11:68919321 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102362 1136 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs29407222
MGI SNP Detail		 Chr11:68919377 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr251243 within coordinates of
Tssr102362 1192 bp downstream
 SNP A/G G G G A G A
rs29464197
MGI SNP Detail		 Chr11:68919666 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr235731 within coordinates of
Rr253641 within coordinates of
Tssr102362 1481 bp downstream
 SNP A/G G G G A G A
rs220140382
MGI SNP Detail		 Chr11:68919679 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr235731 within coordinates of
Rr253641 within coordinates of
Tssr102362 1494 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29471698
MGI SNP Detail		 Chr11:68919696 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr235731 within coordinates of
Rr253641 within coordinates of
Tssr102362 1511 bp downstream
 SNP C/T T T T C T C
rs29422171
MGI SNP Detail		 Chr11:68919735 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr235731 within coordinates of
Rr253641 within coordinates of
Tssr102362 1550 bp downstream
 SNP A/G A A A G A G
rs223231944
MGI SNP Detail		 Chr11:68919781 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr235731 within coordinates of
Rr253641 within coordinates of
Tssr102362 1596 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29468021
MGI SNP Detail		 Chr11:68919800 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr235731 within coordinates of
Rr253641 within coordinates of
Tssr102362 1615 bp downstream
 SNP A/G A A A G A G
rs259713799
MGI SNP Detail		 Chr11:68919895 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr235731 within coordinates of
Rr253641 within coordinates of
Tssr102362 1710 bp downstream
 SNP C/T C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C T C C C C C C C C C
rs29461528
MGI SNP Detail		 Chr11:68919961 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr235731 within coordinates of
Rr253641 within coordinates of
Tssr102362 1776 bp downstream
 SNP A/T A A A T A T
rs29432086
MGI SNP Detail		 Chr11:68920013 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr253641 within coordinates of
Tssr102362 1828 bp downstream
 SNP A/T T T T A T A
rs29467393
MGI SNP Detail		 Chr11:68920032 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr253641 within coordinates of
Tssr102362 1847 bp downstream
 SNP C/T T T T C T C
rs29393431
MGI SNP Detail		 Chr11:68920037 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr253641 within coordinates of
Tssr102362 1852 bp downstream
 SNP A/G A A A G A G
rs29390851
MGI SNP Detail		 Chr11:68920044 Ctc1 within coordinates of
Gm74108 within coordinates of
Rr253641 within coordinates of
Tssr102362 1859 bp downstream
 SNP A/T A A A T A T
rs216752759
MGI SNP Detail		 Chr11:68920064 Ctc1 within coordinates of
Gm74108 within coordinates of
Tssr102362 1879 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229363886
MGI SNP Detail		 Chr11:68920128 Ctc1 within coordinates of
Gm74108 within coordinates of
Tssr102362 1943 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245408748
MGI SNP Detail		 Chr11:68920164 Ctc1 within coordinates of
Gm74108 within coordinates of
Tssr102362 1979 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
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Showing SNP(s) 1 - 60 of 60
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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