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Mouse SNP Summary
Symbol
Name
ID 		Tssr102412
transcription start site region 102412
MGI:6030179

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Showing SNP(s) 1 - 64 of 64

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238447832
MGI SNP Detail		 Chr11:68992368 Per1 within coordinates of
Tssr102412 1823 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254486167
MGI SNP Detail		 Chr11:68992421 Per1 within coordinates of
Tssr102412 1770 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227304251
MGI SNP Detail		 Chr11:68992439 Per1 within coordinates of
Tssr102412 1752 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs245468679
MGI SNP Detail		 Chr11:68992440 Per1 within coordinates of
Tssr102412 1751 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs265767322
MGI SNP Detail		 Chr11:68992448 Per1 within coordinates of
Tssr102412 1743 bp upstream
 SNP A A A A A A A A A A A A A A A A A A
rs581946691
MGI SNP Detail		 Chr11:68992449 Per1 within coordinates of
Tssr102412 1742 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs230233180
MGI SNP Detail		 Chr11:68992538 Per1 within coordinates of
Tssr102412 1653 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G
rs246686404
MGI SNP Detail		 Chr11:68992567 Per1 within coordinates of
Tssr102412 1624 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G
rs253800721
MGI SNP Detail		 Chr11:68992809 Per1 within coordinates of
Tssr102412 1382 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224283913
MGI SNP Detail		 Chr11:68992877 Per1 within coordinates of
Tssr102412 1314 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs246721116
MGI SNP Detail		 Chr11:68992903 Per1 within coordinates of
Tssr102412 1288 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217080274
MGI SNP Detail		 Chr11:68993143 Per1 within coordinates of
Tssr102412 1048 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231774770
MGI SNP Detail		 Chr11:68993144 Per1 within coordinates of
Tssr102412 1047 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs252825888
MGI SNP Detail		 Chr11:68993184 Per1 within coordinates of
Tssr102412 1007 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213886876
MGI SNP Detail		 Chr11:68993198 Per1 within coordinates of
Tssr102412 993 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220235798
MGI SNP Detail		 Chr11:68993199 Per1 within coordinates of
Tssr102412 992 bp upstream
 SNP A/G A G
rs236776284
MGI SNP Detail		 Chr11:68993452 Per1 within coordinates of
Tssr102412 739 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C
rs252271738
MGI SNP Detail		 Chr11:68993472 Per1 within coordinates of
Tssr102412 719 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212387784
MGI SNP Detail		 Chr11:68993473 Per1 within coordinates of
Tssr102412 718 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231125323
MGI SNP Detail		 Chr11:68993495 Per1 within coordinates of
Tssr102412 696 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254862753
MGI SNP Detail		 Chr11:68993601 Per1 within coordinates of
Tssr102412 590 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244021278
MGI SNP Detail		 Chr11:68993602 Per1 within coordinates of
Tssr102412 589 bp upstream
 SNP A/G G A
rs247866251
MGI SNP Detail		 Chr11:68993723 Per1 within coordinates of
Tssr102412 468 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259558476
MGI SNP Detail		 Chr11:68993793 Per1 within coordinates of
Tssr102412 398 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51233656
MGI SNP Detail		 Chr11:68993802 Per1 within coordinates of
Tssr102412 389 bp upstream
 SNP A/C A C A C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238560530
MGI SNP Detail		 Chr11:68993884 Per1 within coordinates of
Tssr102412 307 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253790110
MGI SNP Detail		 Chr11:68993885 Per1 within coordinates of
Tssr102412 306 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224256740
MGI SNP Detail		 Chr11:68993927 Per1 within coordinates of
Tssr102412 264 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs45788728
MGI SNP Detail		 Chr11:68993985 Per1 within coordinates of
Tssr102412 206 bp upstream
 SNP G/T G G T G T
rs47864025
MGI SNP Detail		 Chr11:68994110 Per1 within coordinates of
Tssr102412 81 bp upstream
 SNP C/T T C T C
rs51354956
MGI SNP Detail		 Chr11:68994117 Per1 within coordinates of
Tssr102412 74 bp upstream
 SNP A/G G A G A
rs51504098
MGI SNP Detail		 Chr11:68994138 Per1 within coordinates of
Tssr102412 53 bp upstream
 SNP G/T T G T G
rs47001458
MGI SNP Detail		 Chr11:68994161 Per1 within coordinates of
Tssr102412 30 bp upstream
 SNP G/T T G T G
rs49114063
MGI SNP Detail		 Chr11:68994186 Per1 within coordinates of
Tssr102412 5 bp upstream
 SNP C/T C T C T
rs45962220
MGI SNP Detail		 Chr11:68994203 Per1 within coordinates of
Tssr102412 within coordinates of
 SNP C/T C T C T
rs253454831
MGI SNP Detail		 Chr11:68994290 Per1 within coordinates of
Tssr102412 81 bp downstream
 SNP A/G A G
rs231031712
MGI SNP Detail		 Chr11:68994318 Per1 within coordinates of
Tssr102412 109 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs45937998
MGI SNP Detail		 Chr11:68994345 Per1 within coordinates of
Tssr102412 136 bp downstream
 SNP C/T C T C T
rs219534227
MGI SNP Detail		 Chr11:68994397 Per1 within coordinates of
Tssr102412 188 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C
rs47599577
MGI SNP Detail		 Chr11:68994547 Per1 within coordinates of
Tssr102412 338 bp downstream
 SNP A/C C A C A
rs263372809
MGI SNP Detail		 Chr11:68994553 Per1 within coordinates of
Tssr102412 344 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T C T T T T T T C T T T T
rs47092479
MGI SNP Detail		 Chr11:68994578 Per1 within coordinates of
Tssr102412 369 bp downstream
 SNP A/G G A G A
rs232281446
MGI SNP Detail		 Chr11:68994634 Per1 within coordinates of
Tssr102412 425 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48750915
MGI SNP Detail		 Chr11:68994736 Per1 within coordinates of
Tssr102412 527 bp downstream
 SNP A/G A A G A G
rs218838765
MGI SNP Detail		 Chr11:68994751 Per1 within coordinates of
Tssr102412 542 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48804061
MGI SNP Detail		 Chr11:68994794 Per1 within coordinates of
Tssr102412 585 bp downstream
 SNP A/G A A G A G
rs264369318
MGI SNP Detail		 Chr11:68994805 Per1 within coordinates of
Tssr102412 596 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224107008
MGI SNP Detail		 Chr11:68995005 Per1 within coordinates of
Tssr102412 796 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579756117
MGI SNP Detail		 Chr11:68995058 Per1 within coordinates of
Tssr102412 849 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29389006
MGI SNP Detail		 Chr11:68995072 Per1 within coordinates of
Tssr102412 863 bp downstream
 SNP C/T C C C T C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs583236332
MGI SNP Detail		 Chr11:68995083 Per1 within coordinates of
Tssr102412 874 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264982636
MGI SNP Detail		 Chr11:68995563 Per1 within coordinates of
Tssr102412 1354 bp downstream
 SNP C/T C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C T C C C C C C C C
rs226291099
MGI SNP Detail		 Chr11:68995648 Per1 within coordinates of
Tssr102412 1439 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G
rs243295441
MGI SNP Detail		 Chr11:68995689 Per1 within coordinates of
Tssr102412 1480 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51980141
MGI SNP Detail		 Chr11:68995723 Per1 within coordinates of
Tssr102412 1514 bp downstream
 SNP C/T T C T C
rs49366743
MGI SNP Detail		 Chr11:68995724 Per1 within coordinates of
Tssr102412 1515 bp downstream
 SNP A/T A A T A T
rs29467363
MGI SNP Detail		 Chr11:68995815 Per1 within coordinates of
Tssr102412 1606 bp downstream
 SNP A/G A A G A G
rs219622653
MGI SNP Detail		 Chr11:68995865 Per1 within coordinates of
Tssr102412 1656 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs6326779
MGI SNP Detail		 Chr11:68995979 Per1 within coordinates of
Tssr102412 1770 bp downstream
 SNP C/T T T T T T T T C C C T T C C T C
rs253567985
MGI SNP Detail		 Chr11:68995995 Per1 within coordinates of
Tssr102412 1786 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214271141
MGI SNP Detail		 Chr11:68996016 Per1 within coordinates of
Tssr102412 1807 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs6327240
MGI SNP Detail		 Chr11:68996024 Per1 within coordinates of
Tssr102412 1815 bp downstream
 SNP G/T G G T T G T
rs248243408
MGI SNP Detail		 Chr11:68996048 Per1 within coordinates of
Tssr102412 1839 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs218777809
MGI SNP Detail		 Chr11:68996067 Per1 within coordinates of
Tssr102412 1858 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
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Showing SNP(s) 1 - 64 of 64
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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