About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Tssr102912
transcription start site region 102912
MGI:6030679

<< first < prev1 next > last >>
Showing SNP(s) 1 - 38 of 38

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs230275128
MGI SNP Detail		 Chr11:74719735 Tssr102912 1998 bp upstream
 SNP C/T T C
rs260302179
MGI SNP Detail		 Chr11:74719995 Tssr102912 1738 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs221216010
MGI SNP Detail		 Chr11:74720132 Tssr102912 1601 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs235396597
MGI SNP Detail		 Chr11:74720150 Tssr102912 1583 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs249598945
MGI SNP Detail		 Chr11:74720178 Tssr102912 1555 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580211745
MGI SNP Detail		 Chr11:74720179 Tssr102912 1554 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs29459928
MGI SNP Detail		 Chr11:74720428 Tssr102912 1305 bp upstream
 SNP C/T C T T C C C
rs238729415
MGI SNP Detail		 Chr11:74720433 Tssr102912 1300 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs217197722
MGI SNP Detail		 Chr11:74720482 Tssr102912 1251 bp upstream
 SNP G/T T G
rs223973384
MGI SNP Detail		 Chr11:74720515 Tssr102912 1218 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs250953081
MGI SNP Detail		 Chr11:74720537 Cpgi3246 within coordinates of
Tssr102912 1196 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233668911
MGI SNP Detail		 Chr11:74720768 Cpgi3246 within coordinates of
Tssr102912 965 bp upstream
 SNP A/G A G
rs263857570
MGI SNP Detail		 Chr11:74720892 Cpgi3246 within coordinates of
Gm74357 within coordinates of
Tssr102912 841 bp upstream
 SNP A/G/T G G G G G G G G G G G G G G G G G G G T G G A G G G G A G G G G A G G G G G G A G G G G G G G A G G G G
rs228850004
MGI SNP Detail		 Chr11:74720895 Cpgi3246 within coordinates of
Gm74357 within coordinates of
Tssr102912 838 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs242631881
MGI SNP Detail		 Chr11:74720922 Cpgi3246 within coordinates of
Gm74357 within coordinates of
Tssr102912 811 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29469573
MGI SNP Detail		 Chr11:74720931 Cpgi3246 within coordinates of
Gm74357 within coordinates of
Tssr102912 802 bp upstream
 SNP C/T T C C T C T
rs225750310
MGI SNP Detail		 Chr11:74720979 Cpgi3246 within coordinates of
Gm74357 within coordinates of
Tssr102912 754 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs246216783
MGI SNP Detail		 Chr11:74721089 Cpgi3246 within coordinates of
Gm74357 within coordinates of
Rr402717 within coordinates of
Tssr102912 644 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs215469883
MGI SNP Detail		 Chr11:74721310 Cpgi3246 within coordinates of
Gm74357 within coordinates of
Rr402717 within coordinates of
Tssr102912 423 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A
rs240466355
MGI SNP Detail		 Chr11:74721427 Cpgi3246 within coordinates of
Gm74357 within coordinates of
Tssr102912 306 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A G G G G G G A G G G G G G G G G G G
rs259374603
MGI SNP Detail		 Chr11:74721468 Cpgi3246 within coordinates of
Gm74357 within coordinates of
Tssr102912 265 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T C C C C C C T C C C C C C C C C C C
rs212867604
MGI SNP Detail		 Chr11:74721488 Cpgi3246 within coordinates of
Gm74357 within coordinates of
Tssr102912 245 bp upstream
Tssr109145 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C A C C C C C C A C C C C C C C C C C C
rs236335152
MGI SNP Detail		 Chr11:74721489 Cpgi3246 within coordinates of
Gm74357 within coordinates of
Tssr102912 244 bp upstream
Tssr109145 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs584124415
MGI SNP Detail		 Chr11:74721494 Cpgi3246 within coordinates of
Gm74357 within coordinates of
Tssr102912 239 bp upstream
Tssr109145 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs225469393
MGI SNP Detail		 Chr11:74721603 Cpgi3246 within coordinates of
Gm74357 within coordinates of
Tssr102912 130 bp upstream
 SNP A/C A C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236483247
MGI SNP Detail		 Chr11:74721697 Cpgi3246 within coordinates of
Tssr102912 36 bp upstream
 SNP A/G A G
rs214352283
MGI SNP Detail		 Chr11:74722291 Cpgi3246 within coordinates of
Mnt within coordinates of
Tssr102912 545 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231736580
MGI SNP Detail		 Chr11:74722385 Cpgi3246 within coordinates of
Mnt within coordinates of
Tssr102912 639 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs586327908
MGI SNP Detail		 Chr11:74722626 Cpgi3246 within coordinates of
Mnt within coordinates of
Tssr102912 880 bp downstream
Tssr109146 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs262642215
MGI SNP Detail		 Chr11:74722654 Cpgi3246 within coordinates of
Mnt within coordinates of
Tssr102912 908 bp downstream
 SNP G/T T G
rs253461866
MGI SNP Detail		 Chr11:74722733 Cpgi3246 within coordinates of
Mnt within coordinates of
Tssr102912 987 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs224069371
MGI SNP Detail		 Chr11:74722976 Cpgi3246 within coordinates of
Mnt within coordinates of
Tssr102912 1230 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218318879
MGI SNP Detail		 Chr11:74723110 Cpgi3246 within coordinates of
Mnt within coordinates of
Tssr102912 1364 bp downstream
 SNP C/T C T
rs29425696
MGI SNP Detail		 Chr11:74723369 Mnt within coordinates of
Tssr102912 1623 bp downstream
 SNP A/G G A G G G
rs235591250
MGI SNP Detail		 Chr11:74723455 Mnt within coordinates of
Tssr102912 1709 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs255975431
MGI SNP Detail		 Chr11:74723456 Mnt within coordinates of
Tssr102912 1710 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs225669432
MGI SNP Detail		 Chr11:74723526 Mnt within coordinates of
Tssr102912 1780 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240432440
MGI SNP Detail		 Chr11:74723688 Cpgi3247 within coordinates of
Mnt within coordinates of
Tssr102912 1942 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
<< first < prev1 next > last >>
Showing SNP(s) 1 - 38 of 38
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory